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The map label for this gene is 94309544

Identifier: 94309544

GI number: 94309544

Start: 646427

End: 646801

Strand: Direct

Name: 94309544

Synonym: Rmet_0599

Alternate gene names: NA

Gene position: 646427-646801 (Clockwise)

Preceding gene: 94309543

Following gene: 94309547

Centisome position: 16.46

GC content: 67.47

Gene sequence:

>375_bases
ATGAACACCGCCAACGCAAGCCGTCGCACGCTGCTGGGCTGGATGCTGGCCGCCGCGGTGGTGCCCGTGGTGTCGGTGGT
GAGTCGGAGTGATGCCGCGGCGCCGCGCGTGATCCCGATGCGCGCGCGGCGCTTCGTGTTCATCCCAGATCGCGTGAAGC
TCAAGGCGGGTGAGACCGTGGTGCTGTCGATCACGGCGGAAGACGTGGTGATGGGATTCTCCGCGCCCGACTTCGACGTC
CGTGCGGACCTGCCGCCCGGCCAGGCGATCAAGGTGACGCTGACGGCGGGCAAGCCCGGCAGCTATGGCTTTCTGTGCGA
CATCTTCTGCGGGTCGGGGCACGAGAACATGAGCGGCCTCATCGAGGTGACGTAG

Upstream 100 bases:

>100_bases
CCGCGCATCCGTATCAGGGTCTGGGTTGGCGTCAGGTGACGGCTACACCGTCGCCTGACGGATTCCGGCTGGGTGAGGTC
TCCGTCAACGGGAGCAAGGC

Downstream 100 bases:

>100_bases
AGACGCCATCAAAATGGTTCTGGCGTCTCTCCGGCCGAAAGGCCGTCACTCGCCCTCTCCACCCATGTACTCGTGCGACT
TGCCGTGCGGTGTTTGTTGC

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Family Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNTANASRRTLLGWMLAAAVVPVVSVVSRSDAAAPRVIPMRARRFVFIPDRVKLKAGETVVLSITAEDVVMGFSAPDFDV
RADLPPGQAIKVTLTAGKPGSYGFLCDIFCGSGHENMSGLIEVT

Sequences:

>Translated_124_residues
MNTANASRRTLLGWMLAAAVVPVVSVVSRSDAAAPRVIPMRARRFVFIPDRVKLKAGETVVLSITAEDVVMGFSAPDFDV
RADLPPGQAIKVTLTAGKPGSYGFLCDIFCGSGHENMSGLIEVT
>Mature_124_residues
MNTANASRRTLLGWMLAAAVVPVVSVVSRSDAAAPRVIPMRARRFVFIPDRVKLKAGETVVLSITAEDVVMGFSAPDFDV
RADLPPGQAIKVTLTAGKPGSYGFLCDIFCGSGHENMSGLIEVT

Specific function: Unknown

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13149; Mature: 13149

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTANASRRTLLGWMLAAAVVPVVSVVSRSDAAAPRVIPMRARRFVFIPDRVKLKAGETV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCEEEECCCEE
VLSITAEDVVMGFSAPDFDVRADLPPGQAIKVTLTAGKPGSYGFLCDIFCGSGHENMSGL
EEEEEHHHEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEE
IEVT
EEEC
>Mature Secondary Structure
MNTANASRRTLLGWMLAAAVVPVVSVVSRSDAAAPRVIPMRARRFVFIPDRVKLKAGETV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCEEEECCCEE
VLSITAEDVVMGFSAPDFDVRADLPPGQAIKVTLTAGKPGSYGFLCDIFCGSGHENMSGL
EEEEEHHHEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEE
IEVT
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA