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The map label for this gene is 94309541

Identifier: 94309541

GI number: 94309541

Start: 643881

End: 644681

Strand: Reverse

Name: 94309541

Synonym: Rmet_0596

Alternate gene names: NA

Gene position: 644681-643881 (Counterclockwise)

Preceding gene: 94309542

Following gene: 94309536

Centisome position: 16.41

GC content: 68.04

Gene sequence:

>801_bases
ATGGACTGCAATGACGCCCGCAACCTGCTGCAGGCCTGCGCCGATGGCGAAGTCGGCGCGGCCGACAGCGTGCGTCTGGA
ACGCCACCTCGAGGATTGCGAGTCGTGCGTCGACAGCCTGCGCAACCTGCAGGCACTGCGCGCGGCCACCCGTCATGGCG
CGGCATACCATCGCGCGCCAGCCGATCTGCGCGCGCGCATCCTGGCATCGCTACCCGCCCCCGCCGAGCCCGGATTTGTC
GACTCTGGCGCTGCCGAGCCCGCGGGCTGGCGCAGTTGGTTCACATGGTCGCCCGCCGTCAACGCCGCACTGGCCACGAT
CACGGCTGCGGCCGTAGGACTGAGCCTGTTCCAGTTCAATCAGCAGCCGTCGGAGGGTGACCTGACCGCGAACGCGATCG
TCGCCAGCCACGTGCGTGGCCTGATCTCGAATCGCGCGATCGACGTCGTGTCGTCGGACCAGCACACGGTCAAACCCTGG
TTCAACGGCCGCATCGACTACGCGCCCGACGTGCGCGACCTGGGCGCGGCAGGATTTCCGCTGGTAGGCGGACGGCTCGA
TTACGTCGACGGTCAGCGTGTGGCGGTCATCGTCTACCGGCGCAACCAGCATCCGATCGACGTGTTCGTCATACCGGGCA
ACAACTCGGGGGCACTGGGGGAACGGGAACGCCAGGGCTACCAGATCGAAACCTGGAGCGCGCACGGCATGCGCTACTGG
GCCGTGACCGATGCCTCGGCCGGCGACCTGCGCGCGTTCGTGCAGGCGTGGAGGAATGCGGAAGGGGGAGTGGAACGCTA
G

Upstream 100 bases:

>100_bases
GCCGTGCGCGACGAAGGCGCGGTACGGCTGGCACATCCCGACGCCCCCAACACCGCCAACGCCCCGGCCGATATCGTTCA
ACCCGCAGGAGGCACCCGCC

Downstream 100 bases:

>100_bases
GAGCCGTGGGATTGCTCGTGTTGTGCGCCCCCGCTCCCATTTGTAGGAGCGGGGGCGCAAACCCACCTTAACGCAAACAC
GCAAACGCGCAAACGCTCAG

Product: putative transmembrane transcriptional regulator (Anti-sigma factor)

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDCNDARNLLQACADGEVGAADSVRLERHLEDCESCVDSLRNLQALRAATRHGAAYHRAPADLRARILASLPAPAEPGFV
DSGAAEPAGWRSWFTWSPAVNAALATITAAAVGLSLFQFNQQPSEGDLTANAIVASHVRGLISNRAIDVVSSDQHTVKPW
FNGRIDYAPDVRDLGAAGFPLVGGRLDYVDGQRVAVIVYRRNQHPIDVFVIPGNNSGALGERERQGYQIETWSAHGMRYW
AVTDASAGDLRAFVQAWRNAEGGVER

Sequences:

>Translated_266_residues
MDCNDARNLLQACADGEVGAADSVRLERHLEDCESCVDSLRNLQALRAATRHGAAYHRAPADLRARILASLPAPAEPGFV
DSGAAEPAGWRSWFTWSPAVNAALATITAAAVGLSLFQFNQQPSEGDLTANAIVASHVRGLISNRAIDVVSSDQHTVKPW
FNGRIDYAPDVRDLGAAGFPLVGGRLDYVDGQRVAVIVYRRNQHPIDVFVIPGNNSGALGERERQGYQIETWSAHGMRYW
AVTDASAGDLRAFVQAWRNAEGGVER
>Mature_266_residues
MDCNDARNLLQACADGEVGAADSVRLERHLEDCESCVDSLRNLQALRAATRHGAAYHRAPADLRARILASLPAPAEPGFV
DSGAAEPAGWRSWFTWSPAVNAALATITAAAVGLSLFQFNQQPSEGDLTANAIVASHVRGLISNRAIDVVSSDQHTVKPW
FNGRIDYAPDVRDLGAAGFPLVGGRLDYVDGQRVAVIVYRRNQHPIDVFVIPGNNSGALGERERQGYQIETWSAHGMRYW
AVTDASAGDLRAFVQAWRNAEGGVER

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28745; Mature: 28745

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCNDARNLLQACADGEVGAADSVRLERHLEDCESCVDSLRNLQALRAATRHGAAYHRAP
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
ADLRARILASLPAPAEPGFVDSGAAEPAGWRSWFTWSPAVNAALATITAAAVGLSLFQFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCC
QQPSEGDLTANAIVASHVRGLISNRAIDVVSSDQHTVKPWFNGRIDYAPDVRDLGAAGFP
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHCCCCCCC
LVGGRLDYVDGQRVAVIVYRRNQHPIDVFVIPGNNSGALGERERQGYQIETWSAHGMRYW
CCCCEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHCCEEEEEECCCCEEEE
AVTDASAGDLRAFVQAWRNAEGGVER
EEECCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDCNDARNLLQACADGEVGAADSVRLERHLEDCESCVDSLRNLQALRAATRHGAAYHRAP
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
ADLRARILASLPAPAEPGFVDSGAAEPAGWRSWFTWSPAVNAALATITAAAVGLSLFQFN
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCC
QQPSEGDLTANAIVASHVRGLISNRAIDVVSSDQHTVKPWFNGRIDYAPDVRDLGAAGFP
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHCCCCCCC
LVGGRLDYVDGQRVAVIVYRRNQHPIDVFVIPGNNSGALGERERQGYQIETWSAHGMRYW
CCCCEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHCCEEEEEECCCCEEEE
AVTDASAGDLRAFVQAWRNAEGGVER
EEECCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA