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The map label for this gene is ydiK [H]

Identifier: 94309527

GI number: 94309527

Start: 623215

End: 624318

Strand: Reverse

Name: ydiK [H]

Synonym: Rmet_0582

Alternate gene names: 94309527

Gene position: 624318-623215 (Counterclockwise)

Preceding gene: 94309528

Following gene: 94309526

Centisome position: 15.89

GC content: 67.12

Gene sequence:

>1104_bases
ATGAGTTCCGGACAACTGATTGAGAAGCTGGCTGCCGTATTCGCGCTGATCGTCCTGATCGGCGGCTCGCTGCTCGTACT
CGCGCCATTCGCCACGGCCCTGCTGTGGGGCGCGATCCTCGCCTACAGCTCCTGGCACCCCTATACCGTGCTGACGCGCT
GGCTCGGCAACCGCCGCGGCCTGGCCGCGCTGATTTGCGTGCTGATCGCCACCGTGATCGTGCTCGGGCCGTTCGTCTAC
GCTGGCGCCAGCTTCTCGGCGCACATCGACGAACTGACCGCGCTGGTCAATCGCTATACCGAACACGGTATCCCGCAACT
GCCGGACTGGCTCAGCAGCCTGCCGTTCGTTGGCCCGCAGATCGAATCGGCCTGGAACAAGGTCATCACTGCCGACTCCG
AGACCGTGGCCAGCCTGCGCAAGCTGATTGCGCCGGTGGGACACGCGCTGCTCGGCGCCGGCCTGTCGATCGGTGCCGGT
CTCGGCCAGCTCGCGCTGTCGATCGTACTGGCGTTTTTCTTCTATACCGGTGGCGAATTGGCCGTGGACTGGGTACGCGG
CGGCATGCGCCGTGTGTCCGGCGACCGGGCCGACCACTTGCTGTCACTGGCCGGCAGTACGGTCAAGGGCGTGGTCTACG
GCGTGCTCGGCACCGCTTTTGTGCAAGCCGTGCTGGCCGGCATCGGGTTCTGGATCGCTGGCGTGCCCGGCGCGGCGATT
CTCGGCTTCATCACGTTCTTCCTTTCCGTCGTGCCGATGGGCCCGCCGCTGGCCTGGATTCCCGCCGCGTTGTGGCTCTA
TCACACCGGCGAGACGGGCTGGGCGATCTTCATGGTGGTCTGGGGCGCCGCAGTGGTCGGCATGGCCGACAACGTCATCA
AGCCGCTGCTCATCAGCAAGGGCACCGGCCTGCCGCTCATCTGGATCATGATGGGCGTGCTGGGCGGCGCGCTGGCCTTC
GGCTTCCTGGGCGTCTTCATCGGACCGACCGTGCTGGCCGTGGCGTACGCGCTGCTGCGCGACTGGACCATCGGCAACCA
GGAACGCGCGAGCGTGACCGCCGTCACGGCGCCGCCGCCGTCCCAACTGACCCCGGATGCCTGA

Upstream 100 bases:

>100_bases
CCACCGCAAACTGAGTGATCGAGGGGAAACCCGGACGGCTCATCGAATTCCGCTATGCTATCGGCGTTCTTATAAAGTGG
ACGCCCCTGGCCCGCCAAAG

Downstream 100 bases:

>100_bases
GCACCACGGCCCTGCGGCGTCGGCGTCCGCGCCGGCGCCGGACCTGCGCCACCTCGTGGCCTGCGAGTACTGCGACGCGC
TCTACGAGCGTGCGTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRGLAALICVLIATVIVLGPFVY
AGASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQIESAWNKVITADSETVASLRKLIAPVGHALLGAGLSIGAG
LGQLALSIVLAFFFYTGGELAVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVPGAAI
LGFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPLLISKGTGLPLIWIMMGVLGGALAF
GFLGVFIGPTVLAVAYALLRDWTIGNQERASVTAVTAPPPSQLTPDA

Sequences:

>Translated_367_residues
MSSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRGLAALICVLIATVIVLGPFVY
AGASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQIESAWNKVITADSETVASLRKLIAPVGHALLGAGLSIGAG
LGQLALSIVLAFFFYTGGELAVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVPGAAI
LGFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPLLISKGTGLPLIWIMMGVLGGALAF
GFLGVFIGPTVLAVAYALLRDWTIGNQERASVTAVTAPPPSQLTPDA
>Mature_366_residues
SSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRGLAALICVLIATVIVLGPFVYA
GASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQIESAWNKVITADSETVASLRKLIAPVGHALLGAGLSIGAGL
GQLALSIVLAFFFYTGGELAVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVPGAAIL
GFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPLLISKGTGLPLIWIMMGVLGGALAFG
FLGVFIGPTVLAVAYALLRDWTIGNQERASVTAVTAPPPSQLTPDA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=358, Percent_Identity=32.6815642458101, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38395; Mature: 38264

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRG
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
LAALICVLIATVIVLGPFVYAGASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCH
IESAWNKVITADSETVASLRKLIAPVGHALLGAGLSIGAGLGQLALSIVLAFFFYTGGEL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHH
AVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVPGAAI
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LGFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPLLISK
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTGLPLIWIMMGVLGGALAFGFLGVFIGPTVLAVAYALLRDWTIGNQERASVTAVTAPPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
SQLTPDA
CCCCCCC
>Mature Secondary Structure 
SSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRG
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]