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The map label for this gene is fimA [H]

Identifier: 94309521

GI number: 94309521

Start: 618021

End: 618569

Strand: Reverse

Name: fimA [H]

Synonym: Rmet_0576

Alternate gene names: 94309521

Gene position: 618569-618021 (Counterclockwise)

Preceding gene: 94309523

Following gene: 94309520

Centisome position: 15.75

GC content: 58.11

Gene sequence:

>549_bases
GTGAAACATATTCGAACAAAGATCCTTGCCACATCCCTGCTCCTTGCCGCGTTGAGTCCGACTGCATTTGCCGCGGATGG
CACCATCGTCTTTACTGGCGAAATCAAGGGTCAAACCTGCTCCGTCGCGGGCGAAGGCAGGCCCGCCGGCGACTTCACCG
TTGTGCTGCCCAACGTTCCATCCTCGCTGCTGAACACCGGCGGCAACATCGCAGGTAACACGCCTTTCGCTATTACGCTC
TCTAACTGCACAGCATCCCTCAAGAAAGCGGCGGTTTACTTCGAAGCCGGCGGAAACGTGGATGCCGTCACCGGCAACCT
GAATAACAACGCTGCCACCAACGGCGCAAAGAACGTCCAGATCGCCCTGTCGAACAACGATGGGAGCCCCATCAAACTAG
GGGCCGCGTACCACGCGCAGAACTCGAAAACCGTGGACATTGCAGGCGGCAATGCAACACTGCGGTACCAGGCCCAGTAC
GTGGCAACTGGCACAGCCTCAGCCGGCCTAATCAGCACTACATTGAGGTACTCCGTCGTGTACCCGTAA

Upstream 100 bases:

>100_bases
TGTGCGGCTTCTTATTCCGGATACAGCTGCCTTCGCTCGCTATGCGGATCTCCGCGATTCGCCTTGACAGCCACCAATCA
CATCAATATTCGAGGTCAAT

Downstream 100 bases:

>100_bases
GTCGGATCATCTAACCAGCCTATACCTGCCGGCATGCGCATACATGCCGGCACCTCCAGCCGTGCCCCTCCAGTAGTCGT
TCATCATGTTCAAGACTTCA

Product: Type-1 fimbrial protein subunit precursor

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKHIRTKILATSLLLAALSPTAFAADGTIVFTGEIKGQTCSVAGEGRPAGDFTVVLPNVPSSLLNTGGNIAGNTPFAITL
SNCTASLKKAAVYFEAGGNVDAVTGNLNNNAATNGAKNVQIALSNNDGSPIKLGAAYHAQNSKTVDIAGGNATLRYQAQY
VATGTASAGLISTTLRYSVVYP

Sequences:

>Translated_182_residues
MKHIRTKILATSLLLAALSPTAFAADGTIVFTGEIKGQTCSVAGEGRPAGDFTVVLPNVPSSLLNTGGNIAGNTPFAITL
SNCTASLKKAAVYFEAGGNVDAVTGNLNNNAATNGAKNVQIALSNNDGSPIKLGAAYHAQNSKTVDIAGGNATLRYQAQY
VATGTASAGLISTTLRYSVVYP
>Mature_182_residues
MKHIRTKILATSLLLAALSPTAFAADGTIVFTGEIKGQTCSVAGEGRPAGDFTVVLPNVPSSLLNTGGNIAGNTPFAITL
SNCTASLKKAAVYFEAGGNVDAVTGNLNNNAATNGAKNVQIALSNNDGSPIKLGAAYHAQNSKTVDIAGGNATLRYQAQY
VATGTASAGLISTTLRYSVVYP

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18462; Mature: 18462

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIRTKILATSLLLAALSPTAFAADGTIVFTGEIKGQTCSVAGEGRPAGDFTVVLPNVP
CCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCEEEEECCCCCCCCEEEEECCCC
SSLLNTGGNIAGNTPFAITLSNCTASLKKAAVYFEAGGNVDAVTGNLNNNAATNGAKNVQ
HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEE
IALSNNDGSPIKLGAAYHAQNSKTVDIAGGNATLRYQAQYVATGTASAGLISTTLRYSVV
EEEECCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEEEEEEE
YP
CC
>Mature Secondary Structure
MKHIRTKILATSLLLAALSPTAFAADGTIVFTGEIKGQTCSVAGEGRPAGDFTVVLPNVP
CCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCEEEEECCCCCCCCEEEEECCCC
SSLLNTGGNIAGNTPFAITLSNCTASLKKAAVYFEAGGNVDAVTGNLNNNAATNGAKNVQ
HHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEE
IALSNNDGSPIKLGAAYHAQNSKTVDIAGGNATLRYQAQYVATGTASAGLISTTLRYSVV
EEEECCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEEEEEEE
YP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]