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The map label for this gene is 94309419

Identifier: 94309419

GI number: 94309419

Start: 503388

End: 505175

Strand: Direct

Name: 94309419

Synonym: Rmet_0474

Alternate gene names: NA

Gene position: 503388-505175 (Clockwise)

Preceding gene: 94309418

Following gene: 335055495

Centisome position: 12.82

GC content: 64.15

Gene sequence:

>1788_bases
ATGCCGGCACCTCGAGCTACGCTTCCCGCGACGGCGATCGTCGTCGCATTTACCTTGCCCCTGCTGGTTTCGAAGCACAC
GCTGCCGCTTGCCACGTTCTATGGCGAGTGGACGGCCGGATTGCTTGGCGTATTCCTGATCATCGCCCTGGCGCTGAGGC
CAAGCCAGTCGGGCTCGAGAGCGTCCAGGTCGTTCCCGTGGATCATGCTGCTGCCGATCTGGTTGATTGTCACGACTGTC
GCGCAAGCCGTCACGGGTATGGTCGATGTCACCGGCAGCCGTCAACTCACGCAAATCGTGCTGGCGCTGGGCGCGGCGCT
GATGTTGGCCGCATGGCGTGCCAGCCAGTCGATGTCGACCGACGAGCGCGCGAGTATTGTCGATTCGCTCGCGATCGCCT
TCATGATTGCGGGGCTCCTCGGCACGCTGGCGCAATGGGTGCAAGTCTTCCATCTGGAAGACCAAGCGTTCAACCTCGTA
TCTGAATATTTCTACGACAACAACCGCCGCCTCTGGGGCAATCTGAACCAGCCGAATCATCAGGCCACGATTCAGGGCCT
GGCACTGGTGGCTTCGGTGTGGCTCGCCACGCGTGGGTGGCTGCGGTTTCCGGGCTGGCTCGTCGCGGTGCTGCTGCTGG
AAAGCGGCATCGTGTTGAGCGGGTCGCGCACGGGCGTGCTGCATATCGGATTGGCTGCGCTGTACGCGCTGATCGCCGCG
CATCTGGCACGGGGCACACCTCGCGGCACGGATCCGATGCATCGCGCGCCGGGGCTGATTGTCGCGGCAGTGCTGATGGT
CGTCGGCATCGTGGTGCTCCAGCCAGCCATCAAGCACGCTGGTCAGTTGTTCGACTGGCGGCTGTTCGACACCGTCGCGC
AACTCCAGTCCGGTGATCAGGTTTCCGCCCGCGGCGCCTTGTGGGCACATGCCTGGGCGATGTTCCGCGCGCATCCACTG
CTTGGGGTTGGCTATGGCGAGTTCGGCTGGGCCCAGTTCCAGCAGATGGCCGAGGTTGGCAAAACGGCCGAGATGTCGCT
GCATGCGCATAACGCAGTACTCGATCTGCTGGCCAAGACGGGTCTGGTCGGTACGATCGGCGTGGCGCTGGTACTGGTAG
GGTGGCTCTGGCGCGTGGTGCGCGATCGGATCTGGGCAGCTTCGTCGAGCGAGCGCGCCATGGCCGTGCCGATGCTGTTC
TGGCTGGCGATGTATGGGGCGCACTCGATGCTCGAGTATCCGCTGCACTACCTGTACTTCTTCCTGCCGTTCTGTTTCCT
GCTGGCGTGGCTGGAGCCGTCCGGCTTTGGCAAGCGCTTGCCGCGTGCCGTTCCGGCGATAGCGTGTGTGTTGTTCATCG
TTGTGTCCGCCTTCTTGCTTGTGACGCTCTGGCAGGACTACAAGCGTGTCGAGGCACGCGAGTATGCGCATGAAGATAAG
CGGGATAGCCTGCCGATGCCCAGGCTCTGGTTCCGCCAGCACGCGGCATCGGACACCGTCGAGCACGCCAGGATCACGCC
GGACAATGCTGCCAGCTTGCTGCCGGCGCATATGGCCGCATTGCATCTGCTGCCAACGCCGAACCTCATCGGGCGCACCG
CCTGGTTGCTCGCGTTGACCGGTGATCAGGCGAAAGCACGCCAGTGGGTGGAGCGCTTGCCGTACTACTTTCAGGGCGAC
GAGGCGACGATCTTAGAGATGCTCTCACGCGACTGCGACGCGTTAGGCGCCGACCGCAGGCCCCGCGAGTTCTGCGCCTG
GGCGCGCCTGCGCGCCCGGCGCGGTTGA

Upstream 100 bases:

>100_bases
GGGCTCATACCTCCAAGTCATCGCCGATCTACGTCACCGATCTTTCGGCACCCCCACTGTGCCGCGCTATCATGTCGCCT
TTGCCCCTGATTGCGCGCGA

Downstream 100 bases:

>100_bases
AGCGCGTTCGCGCCGGCAGTATTCAGCGAACGTAGCCAGGCGGCGGAGGCGGCGGATAGTAAGGCTGGTAGTTTGCCGGA
GGCATCGGCTCGTGCGCGGG

Product: putative lipidA core O-antigen ligase transmembrane protein

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein; O-Antigen Ligase; Lipopolysaccharide Biosynthesis Protein; Lipid A Core; O-Antigen Ligase And Related S

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MPAPRATLPATAIVVAFTLPLLVSKHTLPLATFYGEWTAGLLGVFLIIALALRPSQSGSRASRSFPWIMLLPIWLIVTTV
AQAVTGMVDVTGSRQLTQIVLALGAALMLAAWRASQSMSTDERASIVDSLAIAFMIAGLLGTLAQWVQVFHLEDQAFNLV
SEYFYDNNRRLWGNLNQPNHQATIQGLALVASVWLATRGWLRFPGWLVAVLLLESGIVLSGSRTGVLHIGLAALYALIAA
HLARGTPRGTDPMHRAPGLIVAAVLMVVGIVVLQPAIKHAGQLFDWRLFDTVAQLQSGDQVSARGALWAHAWAMFRAHPL
LGVGYGEFGWAQFQQMAEVGKTAEMSLHAHNAVLDLLAKTGLVGTIGVALVLVGWLWRVVRDRIWAASSSERAMAVPMLF
WLAMYGAHSMLEYPLHYLYFFLPFCFLLAWLEPSGFGKRLPRAVPAIACVLFIVVSAFLLVTLWQDYKRVEAREYAHEDK
RDSLPMPRLWFRQHAASDTVEHARITPDNAASLLPAHMAALHLLPTPNLIGRTAWLLALTGDQAKARQWVERLPYYFQGD
EATILEMLSRDCDALGADRRPREFCAWARLRARRG

Sequences:

>Translated_595_residues
MPAPRATLPATAIVVAFTLPLLVSKHTLPLATFYGEWTAGLLGVFLIIALALRPSQSGSRASRSFPWIMLLPIWLIVTTV
AQAVTGMVDVTGSRQLTQIVLALGAALMLAAWRASQSMSTDERASIVDSLAIAFMIAGLLGTLAQWVQVFHLEDQAFNLV
SEYFYDNNRRLWGNLNQPNHQATIQGLALVASVWLATRGWLRFPGWLVAVLLLESGIVLSGSRTGVLHIGLAALYALIAA
HLARGTPRGTDPMHRAPGLIVAAVLMVVGIVVLQPAIKHAGQLFDWRLFDTVAQLQSGDQVSARGALWAHAWAMFRAHPL
LGVGYGEFGWAQFQQMAEVGKTAEMSLHAHNAVLDLLAKTGLVGTIGVALVLVGWLWRVVRDRIWAASSSERAMAVPMLF
WLAMYGAHSMLEYPLHYLYFFLPFCFLLAWLEPSGFGKRLPRAVPAIACVLFIVVSAFLLVTLWQDYKRVEAREYAHEDK
RDSLPMPRLWFRQHAASDTVEHARITPDNAASLLPAHMAALHLLPTPNLIGRTAWLLALTGDQAKARQWVERLPYYFQGD
EATILEMLSRDCDALGADRRPREFCAWARLRARRG
>Mature_594_residues
PAPRATLPATAIVVAFTLPLLVSKHTLPLATFYGEWTAGLLGVFLIIALALRPSQSGSRASRSFPWIMLLPIWLIVTTVA
QAVTGMVDVTGSRQLTQIVLALGAALMLAAWRASQSMSTDERASIVDSLAIAFMIAGLLGTLAQWVQVFHLEDQAFNLVS
EYFYDNNRRLWGNLNQPNHQATIQGLALVASVWLATRGWLRFPGWLVAVLLLESGIVLSGSRTGVLHIGLAALYALIAAH
LARGTPRGTDPMHRAPGLIVAAVLMVVGIVVLQPAIKHAGQLFDWRLFDTVAQLQSGDQVSARGALWAHAWAMFRAHPLL
GVGYGEFGWAQFQQMAEVGKTAEMSLHAHNAVLDLLAKTGLVGTIGVALVLVGWLWRVVRDRIWAASSSERAMAVPMLFW
LAMYGAHSMLEYPLHYLYFFLPFCFLLAWLEPSGFGKRLPRAVPAIACVLFIVVSAFLLVTLWQDYKRVEAREYAHEDKR
DSLPMPRLWFRQHAASDTVEHARITPDNAASLLPAHMAALHLLPTPNLIGRTAWLLALTGDQAKARQWVERLPYYFQGDE
ATILEMLSRDCDALGADRRPREFCAWARLRARRG

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65722; Mature: 65591

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPRATLPATAIVVAFTLPLLVSKHTLPLATFYGEWTAGLLGVFLIIALALRPSQSGSR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ASRSFPWIMLLPIWLIVTTVAQAVTGMVDVTGSRQLTQIVLALGAALMLAAWRASQSMST
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DERASIVDSLAIAFMIAGLLGTLAQWVQVFHLEDQAFNLVSEYFYDNNRRLWGNLNQPNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH
QATIQGLALVASVWLATRGWLRFPGWLVAVLLLESGIVLSGSRTGVLHIGLAALYALIAA
HHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
HLARGTPRGTDPMHRAPGLIVAAVLMVVGIVVLQPAIKHAGQLFDWRLFDTVAQLQSGDQ
HHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSARGALWAHAWAMFRAHPLLGVGYGEFGWAQFQQMAEVGKTAEMSLHAHNAVLDLLAKT
CHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GLVGTIGVALVLVGWLWRVVRDRIWAASSSERAMAVPMLFWLAMYGAHSMLEYPLHYLYF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPFCFLLAWLEPSGFGKRLPRAVPAIACVLFIVVSAFLLVTLWQDYKRVEAREYAHEDK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDSLPMPRLWFRQHAASDTVEHARITPDNAASLLPAHMAALHLLPTPNLIGRTAWLLALT
CCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEE
GDQAKARQWVERLPYYFQGDEATILEMLSRDCDALGADRRPREFCAWARLRARRG
CCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAPRATLPATAIVVAFTLPLLVSKHTLPLATFYGEWTAGLLGVFLIIALALRPSQSGSR
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ASRSFPWIMLLPIWLIVTTVAQAVTGMVDVTGSRQLTQIVLALGAALMLAAWRASQSMST
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DERASIVDSLAIAFMIAGLLGTLAQWVQVFHLEDQAFNLVSEYFYDNNRRLWGNLNQPNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH
QATIQGLALVASVWLATRGWLRFPGWLVAVLLLESGIVLSGSRTGVLHIGLAALYALIAA
HHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
HLARGTPRGTDPMHRAPGLIVAAVLMVVGIVVLQPAIKHAGQLFDWRLFDTVAQLQSGDQ
HHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSARGALWAHAWAMFRAHPLLGVGYGEFGWAQFQQMAEVGKTAEMSLHAHNAVLDLLAKT
CHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GLVGTIGVALVLVGWLWRVVRDRIWAASSSERAMAVPMLFWLAMYGAHSMLEYPLHYLYF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPFCFLLAWLEPSGFGKRLPRAVPAIACVLFIVVSAFLLVTLWQDYKRVEAREYAHEDK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RDSLPMPRLWFRQHAASDTVEHARITPDNAASLLPAHMAALHLLPTPNLIGRTAWLLALT
CCCCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEE
GDQAKARQWVERLPYYFQGDEATILEMLSRDCDALGADRRPREFCAWARLRARRG
CCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA