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The map label for this gene is pilA [H]

Identifier: 94309417

GI number: 94309417

Start: 501865

End: 502413

Strand: Direct

Name: pilA [H]

Synonym: Rmet_0472

Alternate gene names: 94309417

Gene position: 501865-502413 (Clockwise)

Preceding gene: 94309416

Following gene: 94309418

Centisome position: 12.78

GC content: 61.75

Gene sequence:

>549_bases
ATGACGCGTCAAATCAAGGTTGTTTTCCTGCGCGAACAACGCCGCGCATTGGAGCGAAAGAATCGTCGAGGCTTCACGCT
GATCGAACTGATGATCGTTGTCGCGATCATCGGCATTCTTGCCGGCGTCGCCATCCCGCAGTACCAGGACTACATCGCGC
GGTCCCAGTTTGCCGAAGGCATGAGCCTGGCCTCCGGGCAGAAAGCCGGCGTGATCGAATCGTTCGCGGCGGCTGGCGCC
TGCCCGAACAATGCGAGCGCGGCCGTCGATGGCGTGCCCGTGGCCTCGGCGATCAAGGGGAGCTATGTACAGAGCGTCAC
CACGGGTGGCACGGCTTCCAATGCTGGCGGCTGCACGATCATCGCCAAGTTCAAGGACGAAGGTATTACCAGGGGCCTGC
TCGGCAAGCAGGTGACGTTGACTATGGGTAATGCAGACGGCGGATCGGTGACGTGGCAGTGCGAGTCTTCGGCGGACAAG
CGGTACGTGCCGCAGGCCTGCGCGAAAGCGAGTGAGTCGGGTAAGACAACTACGACGACCACGGGCTGA

Upstream 100 bases:

>100_bases
ACCTCGCGGTTTCGCTCGCGATCATGGCCCCGTGCGCATCGCGGATTGCGGGCGCACCCGCACTTTTCCAATCGCACAAC
ACAAATGAAAAGGGGTCAAC

Downstream 100 bases:

>100_bases
GGTAGCTAGCATTACGTCCCGCGCCGGGATGCCGATGGCATGGATCGGAGGCATCTGATCCGCGTATCGGCAACGGGCGA
GGCATCGCACAATTGTGCCT

Product: type IV pilus structural subunit PilA

Products: NA

Alternate protein names: Pilin; Strain P1 [H]

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTRQIKVVFLREQRRALERKNRRGFTLIELMIVVAIIGILAGVAIPQYQDYIARSQFAEGMSLASGQKAGVIESFAAAGA
CPNNASAAVDGVPVASAIKGSYVQSVTTGGTASNAGGCTIIAKFKDEGITRGLLGKQVTLTMGNADGGSVTWQCESSADK
RYVPQACAKASESGKTTTTTTG

Sequences:

>Translated_182_residues
MTRQIKVVFLREQRRALERKNRRGFTLIELMIVVAIIGILAGVAIPQYQDYIARSQFAEGMSLASGQKAGVIESFAAAGA
CPNNASAAVDGVPVASAIKGSYVQSVTTGGTASNAGGCTIIAKFKDEGITRGLLGKQVTLTMGNADGGSVTWQCESSADK
RYVPQACAKASESGKTTTTTTG
>Mature_181_residues
TRQIKVVFLREQRRALERKNRRGFTLIELMIVVAIIGILAGVAIPQYQDYIARSQFAEGMSLASGQKAGVIESFAAAGAC
PNNASAAVDGVPVASAIKGSYVQSVTTGGTASNAGGCTIIAKFKDEGITRGLLGKQVTLTMGNADGGSVTWQCESSADKR
YVPQACAKASESGKTTTTTTG

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 18912; Mature: 18781

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQIKVVFLREQRRALERKNRRGFTLIELMIVVAIIGILAGVAIPQYQDYIARSQFAEG
CCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
MSLASGQKAGVIESFAAAGACPNNASAAVDGVPVASAIKGSYVQSVTTGGTASNAGGCTI
HHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCHHHHHEECCCCCCCCCCEEE
IAKFKDEGITRGLLGKQVTLTMGNADGGSVTWQCESSADKRYVPQACAKASESGKTTTTT
EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEECC
TG
CC
>Mature Secondary Structure 
TRQIKVVFLREQRRALERKNRRGFTLIELMIVVAIIGILAGVAIPQYQDYIARSQFAEG
CCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
MSLASGQKAGVIESFAAAGACPNNASAAVDGVPVASAIKGSYVQSVTTGGTASNAGGCTI
HHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCHHHHHEECCCCCCCCCCEEE
IAKFKDEGITRGLLGKQVTLTMGNADGGSVTWQCESSADKRYVPQACAKASESGKTTTTT
EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEECC
TG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841299; 11294863 [H]