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The map label for this gene is recA [H]

Identifier: 94309411

GI number: 94309411

Start: 495632

End: 496693

Strand: Direct

Name: recA [H]

Synonym: Rmet_0466

Alternate gene names: 94309411

Gene position: 495632-496693 (Clockwise)

Preceding gene: 335055493

Following gene: 94309412

Centisome position: 12.62

GC content: 63.65

Gene sequence:

>1062_bases
ATGGACGACAAGAAGGCCGGCGCCGGCGTGAGCGCTGAGAAGCAGAAGGCGCTTGCCGCCGCGCTCTCCCAGATTGAGAA
GCAGTTTGGCAAGGGCTCGATCATGCGCCTGGGCGATGGCGAAATCGAACAGGACATCCAGGTAGTGTCCACCGGCTCGC
TGGGGCTGGACATCGCGCTGGGCGTGGGTGGCCTGCCGCGCGGCCGCGTGGTCGAGATCTACGGTCCGGAATCGTCCGGC
AAGACCACGCTGACGCTGCAGGTGGTGGCCGAAATGCAGAAGCTGGGCGGCACCTGCGCGTTCATCGACGCCGAGCACGC
CCTGGATGTCCAATATGCTGGCAAGCTCGGCGTGGACGTCGGCAATCTGCTGATCTCCCAGCCCGATACCGGCGAGCAGG
CCCTGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGATCGACCTGATCGTGATCGACTCGGTGGCCGCTCTGGTGCCA
AAGGCAGAAATCGAGGGCGAAATGGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCT
GACCGGCACGATCAAGCGCACGAACTGCCTGGTGATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTT
CTCCCGAAACCACCACCGGCGGTAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGTATCGGCTCGATC
AAGAAGGGCGACGAAGTCGTCGGCAACGAGACCAAGGTCAAGGTGGTCAAGAACAAGGTGTCACCTCCGTTCCGCGAGGC
GTTCTTCGACATCCTCTATGGCCAGGGCATCTCGCGCCAGGGTGAAATCATCGACCTGGGCGTGGACGCCAAGATCGTTG
AGAAGGCCGGCGCCTGGTACAGCTACAACGGCGAGAAGATCGGCCAGGGCAAGGACAACGCACGCGAGTATCTGCGCGAG
AACCCGGACATCGCCGACGAGATCGAGAACAAGGTGCGTCTGGCGCTGGGCGTGGCGCCGCTGAACACCGTGGCGGGCGC
GCCAGCAGAGGTCGAAGGCTGA

Upstream 100 bases:

>100_bases
GGGCGTCGTGGCCTGGAGAATCCATCCCGGAAAAGGGCTTTGGGTTCAGGGCGTCGCGCCGTATGCGGCCTATTTATACA
CCATTGACTGAAGGACGACC

Downstream 100 bases:

>100_bases
GCCTGACGTCGCTGCTTGACGAAAGCCGTCGCATACTTGTGCGGCGGCTTTTTTGTTTTCACCCCGGTTTCCCGTATCGC
GCAGCGCCGACTGCCGGCTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVP
KAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWYSYNGEKIGQGKDNAREYLRE
NPDIADEIENKVRLALGVAPLNTVAGAPAEVEG

Sequences:

>Translated_353_residues
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVP
KAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWYSYNGEKIGQGKDNAREYLRE
NPDIADEIENKVRLALGVAPLNTVAGAPAEVEG
>Mature_353_residues
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVP
KAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWYSYNGEKIGQGKDNAREYLRE
NPDIADEIENKVRLALGVAPLNTVAGAPAEVEG

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=334, Percent_Identity=71.8562874251497, Blast_Score=487, Evalue=1e-139,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37484; Mature: 37484

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECCHHCCEEECCCCCCCH
GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM
HHEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHH
SQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
HHHHHHHHCCHHHCCEEEEEEEHHEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCC
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWY
CCCCHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHCCCEE
SYNGEKIGQGKDNAREYLRENPDIADEIENKVRLALGVAPLNTVAGAPAEVEG
EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHEEEEEECCCHHHHCCCCCCCCC
>Mature Secondary Structure
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEE
GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV
CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECCHHCCEEECCCCCCCH
GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM
HHEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHH
SQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSI
HHHHHHHHCCHHHCCEEEEEEEHHEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCC
KKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWY
CCCCHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHCCCEE
SYNGEKIGQGKDNAREYLRENPDIADEIENKVRLALGVAPLNTVAGAPAEVEG
EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHEEEEEECCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA