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The map label for this gene is ubiH [H]

Identifier: 94309375

GI number: 94309375

Start: 454491

End: 455744

Strand: Reverse

Name: ubiH [H]

Synonym: Rmet_0430

Alternate gene names: 94309375

Gene position: 455744-454491 (Counterclockwise)

Preceding gene: 94309376

Following gene: 94309374

Centisome position: 11.6

GC content: 70.57

Gene sequence:

>1254_bases
ATGACGCTGCCAGCCAGCACTGACGCGCTCGCGGTTGAGCCGCGCGACATCGCCATTGTCGGCGGCGGGCCGGTCGGCCT
GGCGCTGGCGGCGCAGTTGCTACGCACCACCTCGTGGCGCATCACGCTGATCGACGCGGCCACGCCGGCGCGCGCCGCGC
GTGACCCGCGCGCCATTGCCCTGTCGCACGGCAGCCGCCAGTTGCTCGAGCAGATCGGCGCATGGCCGGTGCCGGCGCAG
GCGATCGAGCATATCCATGTATCGCAGCGCGGCCGCTTCGGCCATGTGAAGCTCCATGGCGATGACTATGGCGTGCCCGC
GCTGGGCTATGTGGTCAGGTATGGCGACCTTTGCCAGACCCTCGAACGCGCGCTCGCCCGCGCCGCCGACGCCGCCCCGG
GCCGGCTTGAACGCGCCTTCGAGACGCGTATCGACAACATCGACCAGGGCGACCGGAGCGACCGGAGCGACGCCGCCCTG
GTCCGGCTGACCGGCACCTCGCACGCAGAGCACGAGGGATTACCGGTTGCGTTTGCGGCCCGCATCGCTGTGCAGGCCGA
AGGCGGCCTGTTCCACCAGCAAATCCAGCGCCTGTCGCATGGCACCGAGGCCGTGCGGCGGCGCGACTATCAACAGACCG
CGATCATCGGCCATGTGACGTGCACGCAACCGCAGCCCGGCTGGGCGTGGGAACGCTTTACCGAGGAAGGGCCGCTGGCG
CTGCTGCCACATGAGGAACATGGCGTGCAGGGCTACGCGCTGGTCTGGTGCTGCCCGCCCGAGCAGGCCATGCGCCGGCT
CGCGCTCACCGAGGACGAGTTCGCATATGAACTGGGCCAGGCGTTCGGTACGCGAATGGGGCAGTTCACGCTGGTTGGCA
AGCGCCACGCATTCCCGCTCGGGCTCAATGCCGCGCCGGTCACGGTCGACGGGCGCGTTGCCGCGGTCGGCAATGCCGCG
CAGACGCTACATCCGGTAGCCGGACAGGGGCTGAACCTGGGCCTTCGCGACGCGTTCGCGCTGGCCGATTCGCTGCGCGC
AGGCTGCACACCACAAGCGCTGGAGGCGTTCGCGAGCCGGCACCGGGTCGACCGCGCGATGACAATCGGCATCACCGACC
TGCTGCCGCGTGTGTTCGCCGTGGGCGGCCCGATGGCGGCCCACGCACGCGGCGCGTCGCTCGCAGCACTGGCCTGCGTG
GCGCCGCTCAAGCACGCGCTGGCGCGGCAAATGATGTACGGCGCACGCGGCTAG

Upstream 100 bases:

>100_bases
GCGATGCGCGACGCCACCTCTGGCAAGTCACGCACCGACGCGAATCTGTGGAAGCGATCCGAAGCCGAAGCCCAAGCGCG
CAAGGACGAGGAAGCCAGCC

Downstream 100 bases:

>100_bases
TCGATATTTGCCAGGCAGTTCCCCGACGGCCCCCTTACGGGGCCGTCTTCATGATATTTGCTCATTTCTTGAGCAACCGT
ACCGGATTGGCGGTAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTLPASTDALAVEPRDIAIVGGGPVGLALAAQLLRTTSWRITLIDAATPARAARDPRAIALSHGSRQLLEQIGAWPVPAQ
AIEHIHVSQRGRFGHVKLHGDDYGVPALGYVVRYGDLCQTLERALARAADAAPGRLERAFETRIDNIDQGDRSDRSDAAL
VRLTGTSHAEHEGLPVAFAARIAVQAEGGLFHQQIQRLSHGTEAVRRRDYQQTAIIGHVTCTQPQPGWAWERFTEEGPLA
LLPHEEHGVQGYALVWCCPPEQAMRRLALTEDEFAYELGQAFGTRMGQFTLVGKRHAFPLGLNAAPVTVDGRVAAVGNAA
QTLHPVAGQGLNLGLRDAFALADSLRAGCTPQALEAFASRHRVDRAMTIGITDLLPRVFAVGGPMAAHARGASLAALACV
APLKHALARQMMYGARG

Sequences:

>Translated_417_residues
MTLPASTDALAVEPRDIAIVGGGPVGLALAAQLLRTTSWRITLIDAATPARAARDPRAIALSHGSRQLLEQIGAWPVPAQ
AIEHIHVSQRGRFGHVKLHGDDYGVPALGYVVRYGDLCQTLERALARAADAAPGRLERAFETRIDNIDQGDRSDRSDAAL
VRLTGTSHAEHEGLPVAFAARIAVQAEGGLFHQQIQRLSHGTEAVRRRDYQQTAIIGHVTCTQPQPGWAWERFTEEGPLA
LLPHEEHGVQGYALVWCCPPEQAMRRLALTEDEFAYELGQAFGTRMGQFTLVGKRHAFPLGLNAAPVTVDGRVAAVGNAA
QTLHPVAGQGLNLGLRDAFALADSLRAGCTPQALEAFASRHRVDRAMTIGITDLLPRVFAVGGPMAAHARGASLAALACV
APLKHALARQMMYGARG
>Mature_416_residues
TLPASTDALAVEPRDIAIVGGGPVGLALAAQLLRTTSWRITLIDAATPARAARDPRAIALSHGSRQLLEQIGAWPVPAQA
IEHIHVSQRGRFGHVKLHGDDYGVPALGYVVRYGDLCQTLERALARAADAAPGRLERAFETRIDNIDQGDRSDRSDAALV
RLTGTSHAEHEGLPVAFAARIAVQAEGGLFHQQIQRLSHGTEAVRRRDYQQTAIIGHVTCTQPQPGWAWERFTEEGPLAL
LPHEEHGVQGYALVWCCPPEQAMRRLALTEDEFAYELGQAFGTRMGQFTLVGKRHAFPLGLNAAPVTVDGRVAAVGNAAQ
TLHPVAGQGLNLGLRDAFALADSLRAGCTPQALEAFASRHRVDRAMTIGITDLLPRVFAVGGPMAAHARGASLAALACVA
PLKHALARQMMYGARG

Specific function: Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Escherichia coli, GI1789274, Length=420, Percent_Identity=34.2857142857143, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI1789273, Length=342, Percent_Identity=28.6549707602339, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1786883, Length=402, Percent_Identity=28.6069651741293, Blast_Score=102, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971
- InterPro:   IPR011295 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 44619; Mature: 44488

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPASTDALAVEPRDIAIVGGGPVGLALAAQLLRTTSWRITLIDAATPARAARDPRAIA
CCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCEEE
LSHGSRQLLEQIGAWPVPAQAIEHIHVSQRGRFGHVKLHGDDYGVPALGYVVRYGDLCQT
ECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
LERALARAADAAPGRLERAFETRIDNIDQGDRSDRSDAALVRLTGTSHAEHEGLPVAFAA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE
RIAVQAEGGLFHQQIQRLSHGTEAVRRRDYQQTAIIGHVTCTQPQPGWAWERFTEEGPLA
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHHHCCCCCEE
LLPHEEHGVQGYALVWCCPPEQAMRRLALTEDEFAYELGQAFGTRMGQFTLVGKRHAFPL
ECCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEE
GLNAAPVTVDGRVAAVGNAAQTLHPVAGQGLNLGLRDAFALADSLRAGCTPQALEAFASR
CCCCCCEEECCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
HRVDRAMTIGITDLLPRVFAVGGPMAAHARGASLAALACVAPLKHALARQMMYGARG
HHHHHHEEECHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLPASTDALAVEPRDIAIVGGGPVGLALAAQLLRTTSWRITLIDAATPARAARDPRAIA
CCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCEEE
LSHGSRQLLEQIGAWPVPAQAIEHIHVSQRGRFGHVKLHGDDYGVPALGYVVRYGDLCQT
ECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
LERALARAADAAPGRLERAFETRIDNIDQGDRSDRSDAALVRLTGTSHAEHEGLPVAFAA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE
RIAVQAEGGLFHQQIQRLSHGTEAVRRRDYQQTAIIGHVTCTQPQPGWAWERFTEEGPLA
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHHHCCCCCEE
LLPHEEHGVQGYALVWCCPPEQAMRRLALTEDEFAYELGQAFGTRMGQFTLVGKRHAFPL
ECCCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEE
GLNAAPVTVDGRVAAVGNAAQTLHPVAGQGLNLGLRDAFALADSLRAGCTPQALEAFASR
CCCCCCEEECCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
HRVDRAMTIGITDLLPRVFAVGGPMAAHARGASLAALACVAPLKHALARQMMYGARG
HHHHHHEEECHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]