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The map label for this gene is yebA [C]

Identifier: 94309361

GI number: 94309361

Start: 441328

End: 442722

Strand: Reverse

Name: yebA [C]

Synonym: Rmet_0416

Alternate gene names: 94309361

Gene position: 442722-441328 (Counterclockwise)

Preceding gene: 94309366

Following gene: 94309360

Centisome position: 11.27

GC content: 64.37

Gene sequence:

>1395_bases
ATGTGGTCTAGTCTCCGCGAAGTTTTCGCGCGCGAGCTGGTGGTACTCGTCGACCCTACCAATCCCCAGCACGCGCGTCG
CCGCAAACAATTGACCGTCGCCGTTGGCACGGTTTTCACCCTTGGCATGGCTGCAGCCATGGGCGTTGCCCCGCGCAACG
CCTTCGATGATCCGCTGGCCCCGCGCGTCGAGCAGGCCCTGCGGATGCCGGATGTGCGCCAGCAACTCGAACTGCTCACC
GAAACGGACGAGCAGAGTGTCTACGTGCGTCAGGAACGAATGCAGCGCGGCGACACCATCGCCACGCTGCTGCGCCGGCT
CGGCGTCGACGATCCTGATGCGCAATCGTTCATCCTCAAGAACCCGACCGCTCGTGGCCTGTTCGGCCTGAATCCCGGCC
AGACGGTGCAGGCCGAGATCGACGACAGCAATCTGCTGGTCGCGCTACAGGCCAACCTGGGCGGCGACGCCGCGAGCTCT
CGCGAACTCGTGGTCGAGCGCGTGGCCCCGCAGAAAGACGGCGGCGACTACACGTACAGGGCGCGTATCGCGTCGGTGGA
CAACGACGTGCACTACGAGATGGCCTCTGGCGCCATCGAGAACAACGGCTTCTTCAAGTCGATGGACGCGGCGAACGTAC
CGGACGAGATCGTCAGCCAGATGATCTCGATCTTCTCGGGGGTCATCGACTTCCACCATGACATTACCCGTGGCGACCGT
TTCCGCATCGTCTACGAAGCCGGCTTCCGCGACGGCGCCTTCGTGCGCAACGGCCGCGTGGTGGCGATCGAACTGATCAA
CCGGAACACGCTGTACCAGGCGCTCTGGTATTCGCCCACGGACGGCGAGCCCGGGGCCTACTACACGTTCGACGGCCGCA
GCATGAAGCGCCCGTTCCTGCGTTCGCCGGTGGAGTTCTCGCGCGTCTCGTCGGGCTTCGGCGGCCGCGACCATCCGTTG
CATCACAAGTGGGCGCAGCACAAGGGCGTCGACTTCGCCGCCCCCACGGGCACCAAGGTGTTCGCCTCGGGCGAAGGCAC
GGTAGAGTTCGTGGGCCAGCAAAACGGCTACGGCAACTTGATCATCCTGCGACATGCCGGTGGCTATTCGACTTACTACG
CCCACCTGTCCGGTTTTGCCGGCCTGCGTGACGGCCAGCACGTCGGCCAGGGCGAGGTAATCGGCTACGTCGGGTCCACC
GGCTGGGCTACCGGGCCGCACCTGCATTACGAATTCCGCTACAACGACGTGCCTCAGAATCCGCTGACGACGACACTGAT
GGAAGCGCCCACGCTGACCGGCAAGTCGCGCTCGGAGTTCCTGAACTACACGAGCGCCATGCTGAGCCGGATCAACATGC
TGCGCACCTACAACGTCCTGACGGCCAGTAACTGA

Upstream 100 bases:

>100_bases
TACAAACAACGCCCGCACCGCACCTCGGGGGAGGAAGGCAGACGACACATATCGTCGCGGCAGCGGCCCTAGGTAATACG
GAAAGCTTGAATTCTACGTG

Downstream 100 bases:

>100_bases
CCATGCCCGCCTCCCCGCAGTCCAGCGAGATGTTTATCGGCCTGATGTCCGGCACCTCCATGGACGGCGCGGACGGCGTG
CTCGTCGACTTCTCCGGTGC

Product: putative membrane associated metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MWSSLREVFARELVVLVDPTNPQHARRRKQLTVAVGTVFTLGMAAAMGVAPRNAFDDPLAPRVEQALRMPDVRQQLELLT
ETDEQSVYVRQERMQRGDTIATLLRRLGVDDPDAQSFILKNPTARGLFGLNPGQTVQAEIDDSNLLVALQANLGGDAASS
RELVVERVAPQKDGGDYTYRARIASVDNDVHYEMASGAIENNGFFKSMDAANVPDEIVSQMISIFSGVIDFHHDITRGDR
FRIVYEAGFRDGAFVRNGRVVAIELINRNTLYQALWYSPTDGEPGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGRDHPL
HHKWAQHKGVDFAAPTGTKVFASGEGTVEFVGQQNGYGNLIILRHAGGYSTYYAHLSGFAGLRDGQHVGQGEVIGYVGST
GWATGPHLHYEFRYNDVPQNPLTTTLMEAPTLTGKSRSEFLNYTSAMLSRINMLRTYNVLTASN

Sequences:

>Translated_464_residues
MWSSLREVFARELVVLVDPTNPQHARRRKQLTVAVGTVFTLGMAAAMGVAPRNAFDDPLAPRVEQALRMPDVRQQLELLT
ETDEQSVYVRQERMQRGDTIATLLRRLGVDDPDAQSFILKNPTARGLFGLNPGQTVQAEIDDSNLLVALQANLGGDAASS
RELVVERVAPQKDGGDYTYRARIASVDNDVHYEMASGAIENNGFFKSMDAANVPDEIVSQMISIFSGVIDFHHDITRGDR
FRIVYEAGFRDGAFVRNGRVVAIELINRNTLYQALWYSPTDGEPGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGRDHPL
HHKWAQHKGVDFAAPTGTKVFASGEGTVEFVGQQNGYGNLIILRHAGGYSTYYAHLSGFAGLRDGQHVGQGEVIGYVGST
GWATGPHLHYEFRYNDVPQNPLTTTLMEAPTLTGKSRSEFLNYTSAMLSRINMLRTYNVLTASN
>Mature_464_residues
MWSSLREVFARELVVLVDPTNPQHARRRKQLTVAVGTVFTLGMAAAMGVAPRNAFDDPLAPRVEQALRMPDVRQQLELLT
ETDEQSVYVRQERMQRGDTIATLLRRLGVDDPDAQSFILKNPTARGLFGLNPGQTVQAEIDDSNLLVALQANLGGDAASS
RELVVERVAPQKDGGDYTYRARIASVDNDVHYEMASGAIENNGFFKSMDAANVPDEIVSQMISIFSGVIDFHHDITRGDR
FRIVYEAGFRDGAFVRNGRVVAIELINRNTLYQALWYSPTDGEPGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGRDHPL
HHKWAQHKGVDFAAPTGTKVFASGEGTVEFVGQQNGYGNLIILRHAGGYSTYYAHLSGFAGLRDGQHVGQGEVIGYVGST
GWATGPHLHYEFRYNDVPQNPLTTTLMEAPTLTGKSRSEFLNYTSAMLSRINMLRTYNVLTASN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=269, Percent_Identity=31.9702602230483, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=42.2680412371134, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789099, Length=97, Percent_Identity=39.1752577319588, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 51332; Mature: 51332

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSSLREVFARELVVLVDPTNPQHARRRKQLTVAVGTVFTLGMAAAMGVAPRNAFDDPLA
CCHHHHHHHHCCEEEEECCCCCHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
PRVEQALRMPDVRQQLELLTETDEQSVYVRQERMQRGDTIATLLRRLGVDDPDAQSFILK
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEC
NPTARGLFGLNPGQTVQAEIDDSNLLVALQANLGGDAASSRELVVERVAPQKDGGDYTYR
CCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
ARIASVDNDVHYEMASGAIENNGFFKSMDAANVPDEIVSQMISIFSGVIDFHHDITRGDR
EEEEECCCCEEEEHHCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
FRIVYEAGFRDGAFVRNGRVVAIELINRNTLYQALWYSPTDGEPGAYYTFDGRSMKRPFL
EEEEEECCCCCCCEEECCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHH
RSPVEFSRVSSGFGGRDHPLHHKWAQHKGVDFAAPTGTKVFASGEGTVEFVGQQNGYGNL
CCCCHHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCEEEECCCCEEEEEECCCCCCCE
IILRHAGGYSTYYAHLSGFAGLRDGQHVGQGEVIGYVGSTGWATGPHLHYEFRYNDVPQN
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC
PLTTTLMEAPTLTGKSRSEFLNYTSAMLSRINMLRTYNVLTASN
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MWSSLREVFARELVVLVDPTNPQHARRRKQLTVAVGTVFTLGMAAAMGVAPRNAFDDPLA
CCHHHHHHHHCCEEEEECCCCCHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCC
PRVEQALRMPDVRQQLELLTETDEQSVYVRQERMQRGDTIATLLRRLGVDDPDAQSFILK
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEC
NPTARGLFGLNPGQTVQAEIDDSNLLVALQANLGGDAASSRELVVERVAPQKDGGDYTYR
CCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
ARIASVDNDVHYEMASGAIENNGFFKSMDAANVPDEIVSQMISIFSGVIDFHHDITRGDR
EEEEECCCCEEEEHHCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
FRIVYEAGFRDGAFVRNGRVVAIELINRNTLYQALWYSPTDGEPGAYYTFDGRSMKRPFL
EEEEEECCCCCCCEEECCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHH
RSPVEFSRVSSGFGGRDHPLHHKWAQHKGVDFAAPTGTKVFASGEGTVEFVGQQNGYGNL
CCCCHHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCEEEECCCCEEEEEECCCCCCCE
IILRHAGGYSTYYAHLSGFAGLRDGQHVGQGEVIGYVGSTGWATGPHLHYEFRYNDVPQN
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC
PLTTTLMEAPTLTGKSRSEFLNYTSAMLSRINMLRTYNVLTASN
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]