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The map label for this gene is yciA [C]

Identifier: 94309335

GI number: 94309335

Start: 417962

End: 418435

Strand: Reverse

Name: yciA [C]

Synonym: Rmet_0390

Alternate gene names: 94309335

Gene position: 418435-417962 (Counterclockwise)

Preceding gene: 94309340

Following gene: 94309327

Centisome position: 10.65

GC content: 64.77

Gene sequence:

>474_bases
ATGCCGCGATTGTCGCAGAGATCCGACAACCCGGCTGGCCTCCGCTTCATCCGCCCCGAAAGACCCGCCATGACCACTTC
CAGCTTTGTTCCCGAACTCCCCTCCGGCAAGAATCCCGCGCTGCGCGTGGTGCCGATGCCGGCCGACGCCAACGTACACG
GCGATGTGTTCGGCGGGTGGATCATGTCGCAGGTGGACATGGCCGGATCGATCCCCGCCGTGGAGCGCGCCCAAGGCCGC
GTGGCCACCGTGGCGGTGAATTCGTTCCTGTTCAAGAATCCGGTGTTCGTCGGCGATCTGGTCAGCTTCTATGCCGACAT
CGTCAAGACGGGCCGCACGTCGATCACGGTCTCCGTGGAGGTCTACGCGCAACGGATGCGCCACGCCAACGAGATCGTGA
AAGTGACGGAGGCCACGCTGACGTACGTGGCCACCGACGAGAGCCGGCAACCAAGGGTGTTGCCGGCGGCTTGA

Upstream 100 bases:

>100_bases
TGCGGCGCGCGCCGCCGCCCTGGAACAGCGAATTTGCCGGCTCGGCGGGGGCGGGCTCGGCGGTCGTGGAATAGCGGCGC
ATACGTTAGAATTCGGGCCA

Downstream 100 bases:

>100_bases
TCGCAGGGAGTTCTCTCCTCTCCGCAGCCCCTCTCCCATCGCATGGGAGAGGGGCGCAAACAAGCTACAGCTTGCTTCGC
CTTAGCTGAACTTCGAGAAA

Product: putative thioesterase Protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPRLSQRSDNPAGLRFIRPERPAMTTSSFVPELPSGKNPALRVVPMPADANVHGDVFGGWIMSQVDMAGSIPAVERAQGR
VATVAVNSFLFKNPVFVGDLVSFYADIVKTGRTSITVSVEVYAQRMRHANEIVKVTEATLTYVATDESRQPRVLPAA

Sequences:

>Translated_157_residues
MPRLSQRSDNPAGLRFIRPERPAMTTSSFVPELPSGKNPALRVVPMPADANVHGDVFGGWIMSQVDMAGSIPAVERAQGR
VATVAVNSFLFKNPVFVGDLVSFYADIVKTGRTSITVSVEVYAQRMRHANEIVKVTEATLTYVATDESRQPRVLPAA
>Mature_156_residues
PRLSQRSDNPAGLRFIRPERPAMTTSSFVPELPSGKNPALRVVPMPADANVHGDVFGGWIMSQVDMAGSIPAVERAQGRV
ATVAVNSFLFKNPVFVGDLVSFYADIVKTGRTSITVSVEVYAQRMRHANEIVKVTEATLTYVATDESRQPRVLPAA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=134, Percent_Identity=44.0298507462687, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17070; Mature: 16939

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLSQRSDNPAGLRFIRPERPAMTTSSFVPELPSGKNPALRVVPMPADANVHGDVFGGW
CCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
IMSQVDMAGSIPAVERAQGRVATVAVNSFLFKNPVFVGDLVSFYADIVKTGRTSITVSVE
HHHHHHCCCCCCHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
VYAQRMRHANEIVKVTEATLTYVATDESRQPRVLPAA
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PRLSQRSDNPAGLRFIRPERPAMTTSSFVPELPSGKNPALRVVPMPADANVHGDVFGGW
CCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
IMSQVDMAGSIPAVERAQGRVATVAVNSFLFKNPVFVGDLVSFYADIVKTGRTSITVSVE
HHHHHHCCCCCCHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
VYAQRMRHANEIVKVTEATLTYVATDESRQPRVLPAA
HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]