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The map label for this gene is ybhS [H]

Identifier: 94309293

GI number: 94309293

Start: 367550

End: 368704

Strand: Reverse

Name: ybhS [H]

Synonym: Rmet_0348

Alternate gene names: 94309293

Gene position: 368704-367550 (Counterclockwise)

Preceding gene: 94309294

Following gene: 94309292

Centisome position: 9.39

GC content: 62.94

Gene sequence:

>1155_bases
GTGAAAGCCGTACGCCGTCAGATCTCCCGCTTCTCGGCGCACCGTTGGTGGAGCATCGTCCTGAAGGAATTCCTGCAACT
ACGACGCGATCGCGTCACGTTCGGGATGATGATTGGGATACCGATCATCCAGCTACTGCTGTTCGGCTTTGCGATCAACA
GCGATCCACGCCATATGCCCACCGCGGTCATCGTGGCCGAGCACAGCGACTTCTCCCGCACCTTCATTGCCGCGCTGGAC
AACACCACGTACTTCAAGGTGGTGCGCACGATGCCGGACGAGGCCTCCGGTCGCGAGGCGCTGATGCGCGGCGATGTGCA
GTTCGTGGTCAGCATTCCGGCCGATTTCTCGCGACGCCTGCTGCATGGCGATCGCCCTTCCATCCTGGTCGAGGCCGATG
CCACCGATCCTTCCGCGACGGGCCAGGCCATCGCCGCACTGGCGCAACTCCCGGCCACCGTTGCCCGGATCGACCTGAAG
GGCGCGCTGGCGCCACTGGCCGGCGGGCAACCCGCCTTCGACGTCAACGTGCACCGGCTCTACAACCCGGAGGGCATCAC
GCAGTACAACATCGTGCCGGGGCTGATGGGCACGATCCTGACGATGACGATGGTCATGATGACCGGCCTGGCCATGACGC
GCGAACGCGAGCGCGGCACGATGGAAAATCTGCTGGCCACGCCGGTGCAGCCGCTTGAGGTGATCTCGGGCAAGATCATC
CCGTACATCTTCATCGGACTGATTCAGGCGACGATCATCCTGCTGGCGGCGCATTTCGTGTTCGGCGTGCCGTTCGTCGG
ATCACCCGTGGCCGTGTACCTGGCCGCATTGCTGTTCATCGCGGCCAACCTGACCGTGGGCATCACGCTGTCCTCGCTGG
CGGCCAACCAGTTGCAGGCGCTGCAACTCACATTCTTCTACTTCCTGCCCAATATCCTGCTGTCCGGCTTCATGTTCCCA
TTCGCGGGCATGCCAACGTGGGCGCAGTGGATCGGCAACGTGCTGCCGATGACCTACTTCAACCGGATGATCCGCAGCAT
CATGCTCAAGGGCAGCGGCTGGATCGAACTCTGGCCGAACGTGTGGCCCGTGGCGCTGTTCACGGTGATCGTCCTCACCA
TTGCCGTGCGCTTCTACAAGCGCACGCTCGACTGA

Upstream 100 bases:

>100_bases
TCATCCACATGATGGGTGACGCACAGGACAACATGGCCGTTCCCGCCAAGGAAGCCACCAAGGAGAGCGCAGAAAGGGCC
AGCGGGCCGAAGGGGGACGC

Downstream 100 bases:

>100_bases
AAGGAGACCGCCATGCGCGCGATCCCCACGCTGTTGATGTGCGCCGCCGCGATGTCGCTGGCCGGCTGTGCGGTCGGCCC
GGATTTCCGCACGCCCGATG

Product: ABC-type multidrug transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKAVRRQISRFSAHRWWSIVLKEFLQLRRDRVTFGMMIGIPIIQLLLFGFAINSDPRHMPTAVIVAEHSDFSRTFIAALD
NTTYFKVVRTMPDEASGREALMRGDVQFVVSIPADFSRRLLHGDRPSILVEADATDPSATGQAIAALAQLPATVARIDLK
GALAPLAGGQPAFDVNVHRLYNPEGITQYNIVPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVQPLEVISGKII
PYIFIGLIQATIILLAAHFVFGVPFVGSPVAVYLAALLFIAANLTVGITLSSLAANQLQALQLTFFYFLPNILLSGFMFP
FAGMPTWAQWIGNVLPMTYFNRMIRSIMLKGSGWIELWPNVWPVALFTVIVLTIAVRFYKRTLD

Sequences:

>Translated_384_residues
MKAVRRQISRFSAHRWWSIVLKEFLQLRRDRVTFGMMIGIPIIQLLLFGFAINSDPRHMPTAVIVAEHSDFSRTFIAALD
NTTYFKVVRTMPDEASGREALMRGDVQFVVSIPADFSRRLLHGDRPSILVEADATDPSATGQAIAALAQLPATVARIDLK
GALAPLAGGQPAFDVNVHRLYNPEGITQYNIVPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVQPLEVISGKII
PYIFIGLIQATIILLAAHFVFGVPFVGSPVAVYLAALLFIAANLTVGITLSSLAANQLQALQLTFFYFLPNILLSGFMFP
FAGMPTWAQWIGNVLPMTYFNRMIRSIMLKGSGWIELWPNVWPVALFTVIVLTIAVRFYKRTLD
>Mature_384_residues
MKAVRRQISRFSAHRWWSIVLKEFLQLRRDRVTFGMMIGIPIIQLLLFGFAINSDPRHMPTAVIVAEHSDFSRTFIAALD
NTTYFKVVRTMPDEASGREALMRGDVQFVVSIPADFSRRLLHGDRPSILVEADATDPSATGQAIAALAQLPATVARIDLK
GALAPLAGGQPAFDVNVHRLYNPEGITQYNIVPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVQPLEVISGKII
PYIFIGLIQATIILLAAHFVFGVPFVGSPVAVYLAALLFIAANLTVGITLSSLAANQLQALQLTFFYFLPNILLSGFMFP
FAGMPTWAQWIGNVLPMTYFNRMIRSIMLKGSGWIELWPNVWPVALFTVIVLTIAVRFYKRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=351, Percent_Identity=28.7749287749288, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=26.6304347826087, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI48994943, Length=374, Percent_Identity=27.2727272727273, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI226510979, Length=336, Percent_Identity=26.7857142857143, Blast_Score=95, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24650855, Length=373, Percent_Identity=24.6648793565684, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24650853, Length=373, Percent_Identity=24.6648793565684, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI85725260, Length=373, Percent_Identity=23.0563002680965, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85725262, Length=372, Percent_Identity=23.1182795698925, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42603; Mature: 42603

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVRRQISRFSAHRWWSIVLKEFLQLRRDRVTFGMMIGIPIIQLLLFGFAINSDPRHMP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAVIVAEHSDFSRTFIAALDNTTYFKVVRTMPDEASGREALMRGDVQFVVSIPADFSRRL
EEEEEEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCHHHHHH
LHGDRPSILVEADATDPSATGQAIAALAQLPATVARIDLKGALAPLAGGQPAFDVNVHRL
HCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEECEEEEE
YNPEGITQYNIVPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVQPLEVISGKII
ECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCHH
PYIFIGLIQATIILLAAHFVFGVPFVGSPVAVYLAALLFIAANLTVGITLSSLAANQLQA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHH
LQLTFFYFLPNILLSGFMFPFAGMPTWAQWIGNVLPMTYFNRMIRSIMLKGSGWIELWPN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
VWPVALFTVIVLTIAVRFYKRTLD
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAVRRQISRFSAHRWWSIVLKEFLQLRRDRVTFGMMIGIPIIQLLLFGFAINSDPRHMP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAVIVAEHSDFSRTFIAALDNTTYFKVVRTMPDEASGREALMRGDVQFVVSIPADFSRRL
EEEEEEECCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHCCEEEEEECCCHHHHHH
LHGDRPSILVEADATDPSATGQAIAALAQLPATVARIDLKGALAPLAGGQPAFDVNVHRL
HCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEECEEEEE
YNPEGITQYNIVPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVQPLEVISGKII
ECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCHH
PYIFIGLIQATIILLAAHFVFGVPFVGSPVAVYLAALLFIAANLTVGITLSSLAANQLQA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHH
LQLTFFYFLPNILLSGFMFPFAGMPTWAQWIGNVLPMTYFNRMIRSIMLKGSGWIELWPN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
VWPVALFTVIVLTIAVRFYKRTLD
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]