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The map label for this gene is comM [H]

Identifier: 94309182

GI number: 94309182

Start: 253220

End: 254758

Strand: Reverse

Name: comM [H]

Synonym: Rmet_0237

Alternate gene names: 94309182

Gene position: 254758-253220 (Counterclockwise)

Preceding gene: 94309183

Following gene: 94309179

Centisome position: 6.49

GC content: 69.66

Gene sequence:

>1539_bases
ATGAGCCTAGCCGTCCTGCGCAGCCGCGCCCTGACTGGAATCGAGGCACCGCCCGTCTCCGTCGAAATCCACCTCGCGAA
CGGGTTGCCCGCCTTCAATATCGTCGGGCTGGCCGATACCGAAGTCCGCGAGAGCCGCGAGCGCGTGCGCGCGGCACTGC
TCAACAGCGAGTTCGAATTTCCCAACCGGCGCATCACGGTCAACCTGGCGCCCGCCGATCTGCCCAAGGAGTCCGGTCGT
TTCGACCTGGCGATTGCGCTGGGCATCCTGGCGGCCAGCGGGCAGTTGCAGGCCGATACGCTCGACGCCTTCGAGTTCGC
CGGCGAGCTTTCGCTGGCGGGAGATCTGCGCCCGGTACGCGGCGCGCTCGCGATGGCAATGGGACTGGCCCGCGACAACG
CCCGACGCGTAGCAGAGGATCGCCCGCCGCGCGCCTTCGTCGTCGCCAGCGAGAATGGCGCGGAAGCGGCCCTGGTCGAA
GCCGTGATCGTCCATGCCGGCGCGACACTGCGCGACGTCTGCCATCACATCGGCCTGCTTCCCGAGCGGCCGCTGCCGCG
CGCCCGGCCGCCAGCCCGGGTTGAGGCATCCGCCGATGGCCCCGATATGCGCGACGTTCGCGGCCAGGCACAAGCCCGAC
GCGCCATGGAGATCGCCGCCGCGGGTCAGCACTCCGTACTGCTGGTCGGCCCGCCCGGCACCGGCAAATCGATGCTGGCC
CAGCGCTTCCCTGCCCTGCTGCCGCCGATGACCGAGGCCGAAGCGCTCGAGGCAGCGGCCGTGCAGAGCCTGACCTCGGG
CGGCTTCCACCCGTCCCGCTGGGGCCATCGCCCGTTCCGCAGCCCGCACCATACGGCCAGCGCGCCTGCCCTGGTCGGCG
GGGGCGCCTCGCCACGCCCCGGAGAAATATCGCTGGCGCATCACGGCGTGCTCTTTCTCGACGAACTGCCCGAGTTTGAA
CGGCGCGTGCTCGAAGTCCTGCGCGAGCCGCTCGAAACCGGCCGCATCACGATCTCGCGTGCCGCCGGGCAGGCCGATTT
CCCGGCGCGCTTCCAGTTCGTGGCGGCGATGAATCCCTGCCCTTGCGGCTACCTCGGACACCCCACCCGCATGTGCCGCT
GCACGCCGGATCAGGTGCAGCGCTACCAGTCACGCCTGTCGGGCCCGCTGCTCGATCGCGTGGACCTGCAGATCGAAGTG
CCCGCCCAGAGCCAGCAGGAAATGTTCGATGGACAGCCAGGCGAGCCGAGCCAGACCGTGCGCGCCCGCGCCGTCGTCGC
ACGCGAACGTCAATTGACACGACAGGGCACGCCGAACAGCGAACTAGCTGGTCGCGCGATCGAGACACACTGCCCACTCG
ACAACGAGGCCCGAACGCTGCTGCGCGACGCGATGCAGAAGCTGGGATGGTCGGCGCGCGCGTACTTCCGGGTGCTCAAG
GTAGCCAGAACGATCGCGGACCTGGATGGCGCGGAGGTTCTGACAGCCGGCCACGTGGCCGAGGCGATTCAGTACCGGCG
CGTGCTGCGAACCGCCTAA

Upstream 100 bases:

>100_bases
CCAACCGGCGGAGCATGACGCCGCGTCCACGGCACCCCGTTCAATGCCAGAAAGGCCACCGGATCCCGGTGGCCTTTTTC
GTTAACACTTCCGCAAAGAT

Downstream 100 bases:

>100_bases
GAAAAAATGACGAGGCCCGCAAACGCGGGCCTCGTCATTTTCAGCTTCCACTCAAACCGGTGGCTCCACCGGTGGCGGTG
GCGGTTCCTCGATCGGCGGC

Product: putative Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSLAVLRSRALTGIEAPPVSVEIHLANGLPAFNIVGLADTEVRESRERVRAALLNSEFEFPNRRITVNLAPADLPKESGR
FDLAIALGILAASGQLQADTLDAFEFAGELSLAGDLRPVRGALAMAMGLARDNARRVAEDRPPRAFVVASENGAEAALVE
AVIVHAGATLRDVCHHIGLLPERPLPRARPPARVEASADGPDMRDVRGQAQARRAMEIAAAGQHSVLLVGPPGTGKSMLA
QRFPALLPPMTEAEALEAAAVQSLTSGGFHPSRWGHRPFRSPHHTASAPALVGGGASPRPGEISLAHHGVLFLDELPEFE
RRVLEVLREPLETGRITISRAAGQADFPARFQFVAAMNPCPCGYLGHPTRMCRCTPDQVQRYQSRLSGPLLDRVDLQIEV
PAQSQQEMFDGQPGEPSQTVRARAVVARERQLTRQGTPNSELAGRAIETHCPLDNEARTLLRDAMQKLGWSARAYFRVLK
VARTIADLDGAEVLTAGHVAEAIQYRRVLRTA

Sequences:

>Translated_512_residues
MSLAVLRSRALTGIEAPPVSVEIHLANGLPAFNIVGLADTEVRESRERVRAALLNSEFEFPNRRITVNLAPADLPKESGR
FDLAIALGILAASGQLQADTLDAFEFAGELSLAGDLRPVRGALAMAMGLARDNARRVAEDRPPRAFVVASENGAEAALVE
AVIVHAGATLRDVCHHIGLLPERPLPRARPPARVEASADGPDMRDVRGQAQARRAMEIAAAGQHSVLLVGPPGTGKSMLA
QRFPALLPPMTEAEALEAAAVQSLTSGGFHPSRWGHRPFRSPHHTASAPALVGGGASPRPGEISLAHHGVLFLDELPEFE
RRVLEVLREPLETGRITISRAAGQADFPARFQFVAAMNPCPCGYLGHPTRMCRCTPDQVQRYQSRLSGPLLDRVDLQIEV
PAQSQQEMFDGQPGEPSQTVRARAVVARERQLTRQGTPNSELAGRAIETHCPLDNEARTLLRDAMQKLGWSARAYFRVLK
VARTIADLDGAEVLTAGHVAEAIQYRRVLRTA
>Mature_511_residues
SLAVLRSRALTGIEAPPVSVEIHLANGLPAFNIVGLADTEVRESRERVRAALLNSEFEFPNRRITVNLAPADLPKESGRF
DLAIALGILAASGQLQADTLDAFEFAGELSLAGDLRPVRGALAMAMGLARDNARRVAEDRPPRAFVVASENGAEAALVEA
VIVHAGATLRDVCHHIGLLPERPLPRARPPARVEASADGPDMRDVRGQAQARRAMEIAAAGQHSVLLVGPPGTGKSMLAQ
RFPALLPPMTEAEALEAAAVQSLTSGGFHPSRWGHRPFRSPHHTASAPALVGGGASPRPGEISLAHHGVLFLDELPEFER
RVLEVLREPLETGRITISRAAGQADFPARFQFVAAMNPCPCGYLGHPTRMCRCTPDQVQRYQSRLSGPLLDRVDLQIEVP
AQSQQEMFDGQPGEPSQTVRARAVVARERQLTRQGTPNSELAGRAIETHCPLDNEARTLLRDAMQKLGWSARAYFRVLKV
ARTIADLDGAEVLTAGHVAEAIQYRRVLRTA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=511, Percent_Identity=48.3365949119374, Blast_Score=462, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 55247; Mature: 55116

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVLRSRALTGIEAPPVSVEIHLANGLPAFNIVGLADTEVRESRERVRAALLNSEFEF
CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC
PNRRITVNLAPADLPKESGRFDLAIALGILAASGQLQADTLDAFEFAGELSLAGDLRPVR
CCCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCHHHH
GALAMAMGLARDNARRVAEDRPPRAFVVASENGAEAALVEAVIVHAGATLRDVCHHIGLL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
PERPLPRARPPARVEASADGPDMRDVRGQAQARRAMEIAAAGQHSVLLVGPPGTGKSMLA
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
QRFPALLPPMTEAEALEAAAVQSLTSGGFHPSRWGHRPFRSPHHTASAPALVGGGASPRP
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
GEISLAHHGVLFLDELPEFERRVLEVLREPLETGRITISRAAGQADFPARFQFVAAMNPC
CEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHEEEEEECCCC
PCGYLGHPTRMCRCTPDQVQRYQSRLSGPLLDRVDLQIEVPAQSQQEMFDGQPGEPSQTV
CCCCCCCCCCEEECCHHHHHHHHHHHCCCCCEEECEEEECCCCHHHHHHCCCCCCCHHHH
RARAVVARERQLTRQGTPNSELAGRAIETHCPLDNEARTLLRDAMQKLGWSARAYFRVLK
HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
VARTIADLDGAEVLTAGHVAEAIQYRRVLRTA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAVLRSRALTGIEAPPVSVEIHLANGLPAFNIVGLADTEVRESRERVRAALLNSEFEF
CHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCC
PNRRITVNLAPADLPKESGRFDLAIALGILAASGQLQADTLDAFEFAGELSLAGDLRPVR
CCCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCHHHH
GALAMAMGLARDNARRVAEDRPPRAFVVASENGAEAALVEAVIVHAGATLRDVCHHIGLL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
PERPLPRARPPARVEASADGPDMRDVRGQAQARRAMEIAAAGQHSVLLVGPPGTGKSMLA
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
QRFPALLPPMTEAEALEAAAVQSLTSGGFHPSRWGHRPFRSPHHTASAPALVGGGASPRP
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
GEISLAHHGVLFLDELPEFERRVLEVLREPLETGRITISRAAGQADFPARFQFVAAMNPC
CEEEEECCCEEEEHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHEEEEEECCCC
PCGYLGHPTRMCRCTPDQVQRYQSRLSGPLLDRVDLQIEVPAQSQQEMFDGQPGEPSQTV
CCCCCCCCCCEEECCHHHHHHHHHHHCCCCCEEECEEEECCCCHHHHHHCCCCCCCHHHH
RARAVVARERQLTRQGTPNSELAGRAIETHCPLDNEARTLLRDAMQKLGWSARAYFRVLK
HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
VARTIADLDGAEVLTAGHVAEAIQYRRVLRTA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]