| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309118
Identifier: 94309118
GI number: 94309118
Start: 180414
End: 180776
Strand: Direct
Name: 94309118
Synonym: Rmet_0173
Alternate gene names: NA
Gene position: 180414-180776 (Clockwise)
Preceding gene: 94309117
Following gene: 94309119
Centisome position: 4.59
GC content: 68.32
Gene sequence:
>363_bases ATGCCCGCCGCGCGCCGCCCGGACCCATTCGTCGAGCACCTGCTCGAGCTGATGACGCCGCTGGCGGCCAACATCGGGGC CATCGCGGCCAAGCGGATGTTCGGCGGGCATGGCCTGTTCTACGATGGCCTGATGTTCGCGCTCATCAGTGACGGCCAGT GTTTCCTGAAGGCCGATGACGTCACGCTGGCGCGCTTCGAGGCCGAGGGCAGCGAGCCGTTCCGGTATCAGTCCGCGCGC CGCGAGGTGACGATGCGTCACTACCTGAGCCTGCCAGCCGCATGCCTGGAATCGCCCGCAGCGATGACACCGTGGGCGCG CATGGCCGTGGAAGCCGCGTTGCGTCTGGGCAACGCACGCTGA
Upstream 100 bases:
>100_bases GCGCCTGCTCGAAGCGGGCGTGCCGGGCCTGCACTTCTACACGCTCAACGCCGCCGGCGCGACCAAGGCGATCTGGCAGC GCCTGAAGCTGTAATCCCCG
Downstream 100 bases:
>100_bases CGACCTGGCCACTTGGTCACTGGCGTGGCCGTTGGTGTCATACTCGGCGGCATGGTCACCGCCACATTCCGTTTCTACGA GGAACTGAACGACTTCCTGG
Product: putative regulator of competence-specific genes, TfoX-like protein
Products: NA
Alternate protein names: TfoX Domain Protein; TfoX-Like; TfoX-Like Protein; TfoX N-Terminal; DNA Transformation Protein; Regulator Of Competence-Specific Genes Homologue Protein; FX Family Protein; TfoX Protein; Regulator Of Competence-Specific Genes; Regulator Of Competence-Specific Genes-Like Protein; Regulator Of Competence-Specific Genes TfoX; TfoX N-Terminal Domain Superfamily; Regulator Of Competence-Specific Gene
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPAARRPDPFVEHLLELMTPLAANIGAIAAKRMFGGHGLFYDGLMFALISDGQCFLKADDVTLARFEAEGSEPFRYQSAR REVTMRHYLSLPAACLESPAAMTPWARMAVEAALRLGNAR
Sequences:
>Translated_120_residues MPAARRPDPFVEHLLELMTPLAANIGAIAAKRMFGGHGLFYDGLMFALISDGQCFLKADDVTLARFEAEGSEPFRYQSAR REVTMRHYLSLPAACLESPAAMTPWARMAVEAALRLGNAR >Mature_119_residues PAARRPDPFVEHLLELMTPLAANIGAIAAKRMFGGHGLFYDGLMFALISDGQCFLKADDVTLARFEAEGSEPFRYQSARR EVTMRHYLSLPAACLESPAAMTPWARMAVEAALRLGNAR
Specific function: Unknown
COG id: COG3070
COG function: function code K; Regulator of competence-specific genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13214; Mature: 13082
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAARRPDPFVEHLLELMTPLAANIGAIAAKRMFGGHGLFYDGLMFALISDGQCFLKADD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECC VTLARFEAEGSEPFRYQSARREVTMRHYLSLPAACLESPAAMTPWARMAVEAALRLGNAR EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAARRPDPFVEHLLELMTPLAANIGAIAAKRMFGGHGLFYDGLMFALISDGQCFLKADD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECC VTLARFEAEGSEPFRYQSARREVTMRHYLSLPAACLESPAAMTPWARMAVEAALRLGNAR EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA