| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ycbL [C]
Identifier: 94309066
GI number: 94309066
Start: 126615
End: 127544
Strand: Direct
Name: ycbL [C]
Synonym: Rmet_0121
Alternate gene names: 94309066
Gene position: 126615-127544 (Clockwise)
Preceding gene: 94309065
Following gene: 94309067
Centisome position: 3.22
GC content: 66.67
Gene sequence:
>930_bases ATGAGCACGCCTCCGCTGCTGCCATCGACGATGCGCGTGTTCGAACGCGGCTGGCTATCGGCAAACAACATCCTGTTCAT TGACGATGCCACCGGGGAGTCGGCGCTCGTCGATACGGGCTACGTCACACACGCAGCGCAGACCGAGGCGCTCGTGGCGG CAGCGCTCGATGGCCGGCCGCTGACTCATATCATCAACACGCATCTGCACTCCGACCATTGCGGCGGCAACGCGGCATTG CAGGCACGCTGGCAGCCCCGCACGGCGATTCCGGCGGCGGAGGCAGCGGCGGTCGCTTCCTGGGACCATGTCGCGCTGTC GTTCGATGCCACGGGCCAGCAGTGCGCGCGCTTCGGCTTCGATGCCTTGCTGCACGATGGGGACCGCCTGCGGCTCGGTG GGATCGACTGGGACGTAGTGGCTGCTCCGGGCCATGATCCACACGCGGTGATGCTGTTCGCGCCGTCGCACGGCATCCTG ATTTCTGGCGATGCGCTCTGGGAAAGCGGCTTCGGCGTGATCTTTCCGGAGCTCGATGGCGAGAGCGGCTTCGTCGAGCA GGCCGCGGTGCTCGAGCGCATCGCGGCGCTCGATGCGCGCATCGTGATCCCCGGACACGGGCGGCCGTTTGACGATGTGA CGGGCGCCATCTCGCACGCCAGAAGCCGGCTCGACTACCTGCAAGGCGATGGCGTGCGCAATGCCACCCACGCCGTGCGC GTGCTCGTGAAATTCAAGCTGCTGGAACTGCAGGCGGTCTCGCGCGAGGCGCTGTTCGCGTGGATGCGCGACACGCCGCT GATGCAGCGCATTCACGCACGCTTCATGGCGGGGCAATCCATCGAGGATGTGTTCGACCAGACGTTGCGCGCGCTGGCCA AGGCGGGTGCGCTGACGACCGAAGGCGATCAGGTCCGCAACCAGGACTGA
Upstream 100 bases:
>100_bases AGATCGCGGGTTGGTCGAAGGCCGATGACGAGGAACGCCGCCGCATCTGGGCCCTGCTGCCCGCGCGCGTGCCGCGCCTG TGCGCCGCGGGGAGCGAAGC
Downstream 100 bases:
>100_bases GAATGCAGCCGCTGCGGGGCAAGGACTTCCTGTTGCGACCGTTCCGCGCCAGCGACGTGGACCCGTTCGTTGCCGCCGTG CGGGAGTCCATGGGCACCGT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein; Beta-Lactamase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSTPPLLPSTMRVFERGWLSANNILFIDDATGESALVDTGYVTHAAQTEALVAAALDGRPLTHIINTHLHSDHCGGNAAL QARWQPRTAIPAAEAAAVASWDHVALSFDATGQQCARFGFDALLHDGDRLRLGGIDWDVVAAPGHDPHAVMLFAPSHGIL ISGDALWESGFGVIFPELDGESGFVEQAAVLERIAALDARIVIPGHGRPFDDVTGAISHARSRLDYLQGDGVRNATHAVR VLVKFKLLELQAVSREALFAWMRDTPLMQRIHARFMAGQSIEDVFDQTLRALAKAGALTTEGDQVRNQD
Sequences:
>Translated_309_residues MSTPPLLPSTMRVFERGWLSANNILFIDDATGESALVDTGYVTHAAQTEALVAAALDGRPLTHIINTHLHSDHCGGNAAL QARWQPRTAIPAAEAAAVASWDHVALSFDATGQQCARFGFDALLHDGDRLRLGGIDWDVVAAPGHDPHAVMLFAPSHGIL ISGDALWESGFGVIFPELDGESGFVEQAAVLERIAALDARIVIPGHGRPFDDVTGAISHARSRLDYLQGDGVRNATHAVR VLVKFKLLELQAVSREALFAWMRDTPLMQRIHARFMAGQSIEDVFDQTLRALAKAGALTTEGDQVRNQD >Mature_308_residues STPPLLPSTMRVFERGWLSANNILFIDDATGESALVDTGYVTHAAQTEALVAAALDGRPLTHIINTHLHSDHCGGNAALQ ARWQPRTAIPAAEAAAVASWDHVALSFDATGQQCARFGFDALLHDGDRLRLGGIDWDVVAAPGHDPHAVMLFAPSHGILI SGDALWESGFGVIFPELDGESGFVEQAAVLERIAALDARIVIPGHGRPFDDVTGAISHARSRLDYLQGDGVRNATHAVRV LVKFKLLELQAVSREALFAWMRDTPLMQRIHARFMAGQSIEDVFDQTLRALAKAGALTTEGDQVRNQD
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33346; Mature: 33215
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPPLLPSTMRVFERGWLSANNILFIDDATGESALVDTGYVTHAAQTEALVAAALDGRP CCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCEECCHHHHHHEEECCCCCC LTHIINTHLHSDHCGGNAALQARWQPRTAIPAAEAAAVASWDHVALSFDATGQQCARFGF HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHCH DALLHDGDRLRLGGIDWDVVAAPGHDPHAVMLFAPSHGILISGDALWESGFGVIFPELDG HHHHCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEECCHHHHCCCEEEEECCCC ESGFVEQAAVLERIAALDARIVIPGHGRPFDDVTGAISHARSRLDYLQGDGVRNATHAVR CCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VLVKFKLLELQAVSREALFAWMRDTPLMQRIHARFMAGQSIEDVFDQTLRALAKAGALTT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC EGDQVRNQD CCCCCCCCC >Mature Secondary Structure STPPLLPSTMRVFERGWLSANNILFIDDATGESALVDTGYVTHAAQTEALVAAALDGRP CCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCEECCHHHHHHEEECCCCCC LTHIINTHLHSDHCGGNAALQARWQPRTAIPAAEAAAVASWDHVALSFDATGQQCARFGF HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHCH DALLHDGDRLRLGGIDWDVVAAPGHDPHAVMLFAPSHGILISGDALWESGFGVIFPELDG HHHHCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEECCHHHHCCCEEEEECCCC ESGFVEQAAVLERIAALDARIVIPGHGRPFDDVTGAISHARSRLDYLQGDGVRNATHAVR CCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VLVKFKLLELQAVSREALFAWMRDTPLMQRIHARFMAGQSIEDVFDQTLRALAKAGALTT HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC EGDQVRNQD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA