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The map label for this gene is uvrY [H]

Identifier: 94309035

GI number: 94309035

Start: 97974

End: 98606

Strand: Direct

Name: uvrY [H]

Synonym: Rmet_0090

Alternate gene names: 94309035

Gene position: 97974-98606 (Clockwise)

Preceding gene: 94309034

Following gene: 94309036

Centisome position: 2.49

GC content: 60.35

Gene sequence:

>633_bases
ATGATTCGCGTCCTGATCGCCGACGATCACGAGATCGTGCGTGCAGGTCTGCGCCAGTTCATTGCCGAGGAGCCTGACAT
CGAGGTGACGGGCGAAGCTGGCAGCGGCGACGAAGTGATGGCGCAGTTGCGCGACAGCGAGTTCGACGTGCTCGTGCTCG
ACATTTCCATGCCGGATCGGAATGGCATTGACGTGCTGAAGCTGATCCGACAGAGACTGCCTGCCTTGCCGGTGCTGATC
CTGTCGACCTATCCGGAAGACCAGTACGCCATCAATCTGATACGTGCGGGAGCATCCGGTTACCTGACCAAGGAGTCGGC
GCCGGACGACCTCGTCAAGGCGATCCGCACCGTTGCCCAGGGACGACGTTACGTGAGTCCGACCGTGGCCGACCTGCTGA
TCGGCGGACTGGACAAGCCCACCGATCAGCCCGTGCACCGCACGCTCTCCGAGCGCGAGTTCCAGATCTTCTGCAAGCTG
TCACGCGGGCAATCCGTCTCGGTCATCGCTGACGAACTGTTCCTGAGCGTCAAGACGGTGAGTACCTATCGTTCACGCAT
CCTGGAGAAGATGGGGATGAAGACCAATGCCGATCTGACGTACTACGCCATCAAGAACGGCCTGGTGGAGTAA

Upstream 100 bases:

>100_bases
TGAGACTGACATATTTGGCCGCGCGGCAGCACTACAATGCAAAAAAGCCGGCCCGGTCCATCCATCCGAAGCCGGGCCGT
CCTTCACCGTGGAGACACAG

Downstream 100 bases:

>100_bases
GAGGTGCTATCAAAAAGATTCTGGCGTCGTTGCGGGGCCTTGCCGTACGACTTGTACTGTCTGCGGCCCCCCGCCTAGCC
AGAACCGATTCGCTTCATTT

Product: response regulator, NarL family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDRNGIDVLKLIRQRLPALPVLI
LSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQGRRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKL
SRGQSVSVIADELFLSVKTVSTYRSRILEKMGMKTNADLTYYAIKNGLVE

Sequences:

>Translated_210_residues
MIRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDRNGIDVLKLIRQRLPALPVLI
LSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQGRRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKL
SRGQSVSVIADELFLSVKTVSTYRSRILEKMGMKTNADLTYYAIKNGLVE
>Mature_210_residues
MIRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDRNGIDVLKLIRQRLPALPVLI
LSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQGRRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKL
SRGQSVSVIADELFLSVKTVSTYRSRILEKMGMKTNADLTYYAIKNGLVE

Specific function: Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. UvrY activates the transcription of the untranslated csrB RNA and of barA, in an autoregulatory loop. Mediates the

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=211, Percent_Identity=36.9668246445498, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1790102, Length=200, Percent_Identity=38.5, Blast_Score=133, Evalue=7e-33,
Organism=Escherichia coli, GI1788712, Length=205, Percent_Identity=29.7560975609756, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=32.1608040201005, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=30.5, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787473, Length=182, Percent_Identity=29.1208791208791, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788546, Length=208, Percent_Identity=27.8846153846154, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87082052, Length=134, Percent_Identity=33.5820895522388, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23336; Mature: 23336

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDR
CEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCC
NGIDVLKLIRQRLPALPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQ
CCHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEEECCCCCCEECCCCCHHHHHHHHHHHC
GRRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKLSRGQSVSVIADELFLSVKTV
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
STYRSRILEKMGMKTNADLTYYAIKNGLVE
HHHHHHHHHHHCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MIRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDR
CEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCC
NGIDVLKLIRQRLPALPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQ
CCHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEEECCCCCCEECCCCCHHHHHHHHHHHC
GRRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKLSRGQSVSVIADELFLSVKTV
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
STYRSRILEKMGMKTNADLTYYAIKNGLVE
HHHHHHHHHHHCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]