| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is pcaD [H]
Identifier: 94309029
GI number: 94309029
Start: 91161
End: 92009
Strand: Direct
Name: pcaD [H]
Synonym: Rmet_0084
Alternate gene names: 94309029
Gene position: 91161-92009 (Clockwise)
Preceding gene: 94309028
Following gene: 94309030
Centisome position: 2.32
GC content: 63.84
Gene sequence:
>849_bases ATGTCTGACACTTCCGCATCGACCGCGTCGCAAACGAACCGGCTTCGGGTCGGGGATGTGCATTTGCAAGTGCGCGTCGA TGGTACCGAAGGCCCTTGGGTGATCCTGGCCCATGCGCTCGGTGCGAATCTGACTTTGTGGGATGACACCGCGCGGCACC TTGCCGCACGCTATCGCGTGCTGCGTTTCGACATGCGGGGCCATGGGGGTAGCGATGCGCCGGTGGGCGCCTACACGATG ACGCGGCTGGCCGACGACGTGGTGGCGCTGATGGACGAACTCGATATCGCGCAGGCCCACTTCTGTGGGGTGTCGGTGGG CGGTATGGTGGCGCAGACGTTGGGCGTGCGCCATCCGGAGCGGCTGTTGTCGCTGACGCTGGTGGACACGATTCACCACA CGCCGCTGGAAGCCCGGGCGATGTGGGCCGACCGGATCGGACAGGTGGAAGCGCATGGCATGGGCGGGACCGTCGAGTCG ACGCTGAATCGGTGGCTGACCGCACCGTTCCGGGAGCGGCACCCAGAAATCGTCGAGAGAATCAGGAAAATGTTGCTGGA AACACCAGTGCGCGGCTATGTTGGTGTAGCGCAGGCCATCGAAGCCTTCGATCTGGCCCGCGCGATCTCCCGGATTCACT GCCCGACGCTAGTGGTGGTCGGCGACAAGGACGAGGGCTCGCCGGTGTCGATCGCCGAAGCCATCGCCCGTGAGATTCAC GGTTCAAGGCTGGAAGTGCTGCCGGACGCGGCGCACCTGTCATTCATCGAACAACCGGAACGTTTCCATGCGATGTTCGA CGCGTTCCTGGGACACGCGGCTTGTGGCGGCCAGTGTGATATTCCGTAA
Upstream 100 bases:
>100_bases TGGCACTCAGATCGATCTCGTCTATCGTAGTAGTGAGACACATTGACGAATGCGCCTTGGGAGCCGGTGGGTGGCGCCAT GACCGTACGGAGACTGACAC
Downstream 100 bases:
>100_bases CGCCATTGGAAATATCGCAACACAGTAGTGCACGGCGCTCAAGAAACTTGCAGGCTGCGCCGATGCCCAATGTAAGAGGG CAGCAATGGCACGACAAGGT
Product: putative hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSDTSASTASQTNRLRVGDVHLQVRVDGTEGPWVILAHALGANLTLWDDTARHLAARYRVLRFDMRGHGGSDAPVGAYTM TRLADDVVALMDELDIAQAHFCGVSVGGMVAQTLGVRHPERLLSLTLVDTIHHTPLEARAMWADRIGQVEAHGMGGTVES TLNRWLTAPFRERHPEIVERIRKMLLETPVRGYVGVAQAIEAFDLARAISRIHCPTLVVVGDKDEGSPVSIAEAIAREIH GSRLEVLPDAAHLSFIEQPERFHAMFDAFLGHAACGGQCDIP
Sequences:
>Translated_282_residues MSDTSASTASQTNRLRVGDVHLQVRVDGTEGPWVILAHALGANLTLWDDTARHLAARYRVLRFDMRGHGGSDAPVGAYTM TRLADDVVALMDELDIAQAHFCGVSVGGMVAQTLGVRHPERLLSLTLVDTIHHTPLEARAMWADRIGQVEAHGMGGTVES TLNRWLTAPFRERHPEIVERIRKMLLETPVRGYVGVAQAIEAFDLARAISRIHCPTLVVVGDKDEGSPVSIAEAIAREIH GSRLEVLPDAAHLSFIEQPERFHAMFDAFLGHAACGGQCDIP >Mature_281_residues SDTSASTASQTNRLRVGDVHLQVRVDGTEGPWVILAHALGANLTLWDDTARHLAARYRVLRFDMRGHGGSDAPVGAYTMT RLADDVVALMDELDIAQAHFCGVSVGGMVAQTLGVRHPERLLSLTLVDTIHHTPLEARAMWADRIGQVEAHGMGGTVEST LNRWLTAPFRERHPEIVERIRKMLLETPVRGYVGVAQAIEAFDLARAISRIHCPTLVVVGDKDEGSPVSIAEAIAREIHG SRLEVLPDAAHLSFIEQPERFHAMFDAFLGHAACGGQCDIP
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30754; Mature: 30623
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSASTASQTNRLRVGDVHLQVRVDGTEGPWVILAHALGANLTLWDDTARHLAARYRV CCCCCCCCHHHCCCEEEEEEEEEEEEECCCCCEEEEEEHHCCCEEEECHHHHHHHHHHHH LRFDMRGHGGSDAPVGAYTMTRLADDVVALMDELDIAQAHFCGVSVGGMVAQTLGVRHPE HEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH RLLSLTLVDTIHHTPLEARAMWADRIGQVEAHGMGGTVESTLNRWLTAPFRERHPEIVER HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHCCHHHHHH IRKMLLETPVRGYVGVAQAIEAFDLARAISRIHCPTLVVVGDKDEGSPVSIAEAIAREIH HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GSRLEVLPDAAHLSFIEQPERFHAMFDAFLGHAACGGQCDIP CCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDTSASTASQTNRLRVGDVHLQVRVDGTEGPWVILAHALGANLTLWDDTARHLAARYRV CCCCCCCHHHCCCEEEEEEEEEEEEECCCCCEEEEEEHHCCCEEEECHHHHHHHHHHHH LRFDMRGHGGSDAPVGAYTMTRLADDVVALMDELDIAQAHFCGVSVGGMVAQTLGVRHPE HEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHH RLLSLTLVDTIHHTPLEARAMWADRIGQVEAHGMGGTVESTLNRWLTAPFRERHPEIVER HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHCCHHHHHH IRKMLLETPVRGYVGVAQAIEAFDLARAISRIHCPTLVVVGDKDEGSPVSIAEAIAREIH HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GSRLEVLPDAAHLSFIEQPERFHAMFDAFLGHAACGGQCDIP CCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]