| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94309024
Identifier: 94309024
GI number: 94309024
Start: 85945
End: 86844
Strand: Reverse
Name: 94309024
Synonym: Rmet_0079
Alternate gene names: NA
Gene position: 86844-85945 (Counterclockwise)
Preceding gene: 94309025
Following gene: 94309023
Centisome position: 2.21
GC content: 65.89
Gene sequence:
>900_bases ATGTTCGGACAGTTACCCGATTTCACCAACAGCTACGAGTTCCTTCGCAAGCTCTGGGCTTCCGGCAGCGGAATGCCCAG CGGGCTGATGCCCGGCCTGAGCGCGATGACGCCCCCGATGGATCTCGAGGGCATCGACAAGCGGATTCACGACCTCAAGG CAGTGGAAAGCTGGCTGCAGCTCAACTCGAGCCTGCTGCGCACGACCATCCAGGGCCTTGAAGTGCAACGGGCCACGCTG GTAGCGCTGCAGACGTTTGGCAGCGCGCTCTCCCCCGATGCCATGCAGAGCGCGATGGAAAACGTGGCGCGCGCCGCCAG CGCCCCGAGCGCCGCACCGCATCACCAGTACGGCGCTGCCGAGACGGTCTCGGAAGCACAAGCCGATGCGGAAAATGACG AGCCCGCCGATGACGACATCGACGCGCCGCCCGAATCCGGCGCCGAAGCCTCGGCCACTTCCACCGGACCCGCCCAGGTG CCGCCCAATGCATCGCTGTGGTGGGACCTGATGCAGCAACAGTTCAACCAGATCGCCAGCAGCGCGGCGGCGGCGGCCAA TGTCACGCCGTTCAGCAACCTTGGTGGCTTCGGCGCCAGCCCGGCAGGCAGCGAGTCTGCTACGAGCACCACGAGCACCA CGAGCACCACGAGCACCACGAGCGCCGGCGATAACAAGTCCGGTCCTGCACCCAAGGGGGCGAAGACGTCCGGGACGAAG AAGGCGGGAACAAAGACCGTAGCCAGGAAATCCGCAAAATCGGCGACAAAGCCGGCGGCGAAGACATCGGGCAAGCCGGC TGCAAAGAAACCCGCAGCCCGAAAGGCATCGGCCGGGAAATCGACGGCCAAGCCTGAGACCCCGCCAGCGCCCGGCACGC CGGAGGACACGTTCGAGTGA
Upstream 100 bases:
>100_bases AGGCATGGCGAGCCTGCGTCAGAAGCGGCCGCCCGAATTCAAGTAACCGGTCGTCCTGCTCACGTTTCGGGACGACCATG TCAGACGGAGTTGCGCGACC
Downstream 100 bases:
>100_bases GCGCGCTCTCCGCACATTCGGCGGAGGCCTCGGCCCGCGCCCGCCAGCGCCAGAGCACCGCTCTGGTGATGATGGGCGGT GGCGCGCGGGCCGCGTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MFGQLPDFTNSYEFLRKLWASGSGMPSGLMPGLSAMTPPMDLEGIDKRIHDLKAVESWLQLNSSLLRTTIQGLEVQRATL VALQTFGSALSPDAMQSAMENVARAASAPSAAPHHQYGAAETVSEAQADAENDEPADDDIDAPPESGAEASATSTGPAQV PPNASLWWDLMQQQFNQIASSAAAAANVTPFSNLGGFGASPAGSESATSTTSTTSTTSTTSAGDNKSGPAPKGAKTSGTK KAGTKTVARKSAKSATKPAAKTSGKPAAKKPAARKASAGKSTAKPETPPAPGTPEDTFE
Sequences:
>Translated_299_residues MFGQLPDFTNSYEFLRKLWASGSGMPSGLMPGLSAMTPPMDLEGIDKRIHDLKAVESWLQLNSSLLRTTIQGLEVQRATL VALQTFGSALSPDAMQSAMENVARAASAPSAAPHHQYGAAETVSEAQADAENDEPADDDIDAPPESGAEASATSTGPAQV PPNASLWWDLMQQQFNQIASSAAAAANVTPFSNLGGFGASPAGSESATSTTSTTSTTSTTSAGDNKSGPAPKGAKTSGTK KAGTKTVARKSAKSATKPAAKTSGKPAAKKPAARKASAGKSTAKPETPPAPGTPEDTFE >Mature_299_residues MFGQLPDFTNSYEFLRKLWASGSGMPSGLMPGLSAMTPPMDLEGIDKRIHDLKAVESWLQLNSSLLRTTIQGLEVQRATL VALQTFGSALSPDAMQSAMENVARAASAPSAAPHHQYGAAETVSEAQADAENDEPADDDIDAPPESGAEASATSTGPAQV PPNASLWWDLMQQQFNQIASSAAAAANVTPFSNLGGFGASPAGSESATSTTSTTSTTSTTSAGDNKSGPAPKGAKTSGTK KAGTKTVARKSAKSATKPAAKTSGKPAAKKPAARKASAGKSTAKPETPPAPGTPEDTFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30493; Mature: 30493
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQLPDFTNSYEFLRKLWASGSGMPSGLMPGLSAMTPPMDLEGIDKRIHDLKAVESWLQ CCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH LNSSLLRTTIQGLEVQRATLVALQTFGSALSPDAMQSAMENVARAASAPSAAPHHQYGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCHH ETVSEAQADAENDEPADDDIDAPPESGAEASATSTGPAQVPPNASLWWDLMQQQFNQIAS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SAAAAANVTPFSNLGGFGASPAGSESATSTTSTTSTTSTTSAGDNKSGPAPKGAKTSGTK HHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KAGTKTVARKSAKSATKPAAKTSGKPAAKKPAARKASAGKSTAKPETPPAPGTPEDTFE HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFGQLPDFTNSYEFLRKLWASGSGMPSGLMPGLSAMTPPMDLEGIDKRIHDLKAVESWLQ CCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH LNSSLLRTTIQGLEVQRATLVALQTFGSALSPDAMQSAMENVARAASAPSAAPHHQYGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCHH ETVSEAQADAENDEPADDDIDAPPESGAEASATSTGPAQVPPNASLWWDLMQQQFNQIAS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SAAAAANVTPFSNLGGFGASPAGSESATSTTSTTSTTSTTSAGDNKSGPAPKGAKTSGTK HHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KAGTKTVARKSAKSATKPAAKTSGKPAAKKPAARKASAGKSTAKPETPPAPGTPEDTFE HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA