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The map label for this gene is yrbE [C]

Identifier: 94309017

GI number: 94309017

Start: 79194

End: 80324

Strand: Reverse

Name: yrbE [C]

Synonym: Rmet_0072

Alternate gene names: 94309017

Gene position: 80324-79194 (Counterclockwise)

Preceding gene: 94309021

Following gene: 94309016

Centisome position: 2.04

GC content: 64.46

Gene sequence:

>1131_bases
TTGGAACGCCAGCCGACACCCGTCATTGAGATATCGCGCCAGGACACCGACTTCCGCGTGCAGTTGCAGGGAGAGTGGAC
GGCCGTTGCGCTAGCCGGATGCCATGAAGCACGTGGCCTGCGCGCGCAACTGCACGAACTGTCCGAGGCGCCGCGCCACG
CCGAGTGGTCCCTCGATGGCATCACGCGCCTCGACCATATCGGCGCACAACTGATCTGGCAGGCCTGGAATGGCCACATG
CCTGACAACGTGTCGCTCAATGACGGCCAGAAGCGCGTATTCGCGCGCATCGCCGGCCTGCGCACCGAGGGCTGGAAGAA
GCACATGGTCGAACGCTTCAACCCGGTGACAATCGTCGGCGCGAGCGTGCTGTCGTTTCTGGCCCAACTCGGCGTCGGCG
TCACGATGCTCGGGCAACTGGTGTTCGACCTGTTGCGCTTCCTGCGCGCGCCGCAGCGCGGCCCCTGGCGCGAAATCTCC
GCGAATATCTACAACGTCGGCTACAAGGCGCTCGGCATCACGGCGCTGGTCGCCTTCCTGATCGGCATCGTGCTGTCCTA
CCTGTCGGCCAATCAGCTGCGGATATTTGGCGCCAGCACGTTCATCGTCAATATTCTCGGCATGGCCGTTATCCGCGAGC
TCGGTCCGGTGCTGGCCGCGATCCTGATCGCCGGCCGCTCCGGCTCGGCCATCACCGCGCAGATCGGCGTCATGCGGGTG
ACCGAGGAACTCGACGCGATGTCCGTGATGGGGATTTCCCATGGCTTCCGGCTGGTCATGCCGCGTGTGATCGCCCTGGC
CATCTCCATGCCACTGCTCGTGGCCTGGACCGACCTGCTGGCGCTATTCGGTGGCATGGTCGCCGCCCGCCTGCAGCTCG
ACATCAGCTACGTGTACTTCCTGCGCCAGTTGCCCGATGCAGTGCCGGTTGCCAACCTGTGGTTCGGCCTGTGCAAGGGC
GTGGTCTTCGGCATGCTGATCGCGCTGACGGCCTGCCACTTCGGCCTGCGCGTCAAACCCAATACGCAGAGCCTGGGCCA
GGGCACGACCGCATCGGTGGTGACGTCGATCACCGTGGTCATCATCGCCGACGCCGTGTTCGCAATCCTGTTCAAGGACA
TCGGCATATGA

Upstream 100 bases:

>100_bases
TCTGGCGAGATTGTAGCCGCCACCGTGTCAGAAGGTGTCTGATCGCCATGCCGGCGGCCAGTAGCATAGAATCGAGACTC
GCCCATCACATCAGCCTCAT

Downstream 100 bases:

>100_bases
GTCCAACCATTGAGCGCGGCACCCCGCGCGAGACGATCATCGAGGTGCGCAACCTCGAGAAGCGCTTCGGCGACAACGTG
GTCCACAAGGATCTGAACCT

Product: ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MERQPTPVIEISRQDTDFRVQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGHM
PDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVGASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQRGPWREIS
ANIYNVGYKALGITALVAFLIGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRV
TEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAVPVANLWFGLCKG
VVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFAILFKDIGI

Sequences:

>Translated_376_residues
MERQPTPVIEISRQDTDFRVQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGHM
PDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVGASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQRGPWREIS
ANIYNVGYKALGITALVAFLIGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRV
TEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAVPVANLWFGLCKG
VVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFAILFKDIGI
>Mature_376_residues
MERQPTPVIEISRQDTDFRVQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGHM
PDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVGASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQRGPWREIS
ANIYNVGYKALGITALVAFLIGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRV
TEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAVPVANLWFGLCKG
VVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFAILFKDIGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=214, Percent_Identity=33.1775700934579, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40933; Mature: 40933

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQPTPVIEISRQDTDFRVQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDG
CCCCCCCEEEEECCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH
ITRLDHIGAQLIWQAWNGHMPDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHH
ASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQRGPWREISANIYNVGYKALGITALVAFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHH
IGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRV
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
TEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQLPDAVPVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHH
IIADAVFAILFKDIGI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERQPTPVIEISRQDTDFRVQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDG
CCCCCCCEEEEECCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH
ITRLDHIGAQLIWQAWNGHMPDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHH
ASVLSFLAQLGVGVTMLGQLVFDLLRFLRAPQRGPWREISANIYNVGYKALGITALVAFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHH
IGIVLSYLSANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRV
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
TEELDAMSVMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYF
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQLPDAVPVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCHHHHHHHHHHH
IIADAVFAILFKDIGI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]