| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309014
Identifier: 94309014
GI number: 94309014
Start: 76725
End: 77372
Strand: Reverse
Name: 94309014
Synonym: Rmet_0069
Alternate gene names: NA
Gene position: 77372-76725 (Counterclockwise)
Preceding gene: 94309015
Following gene: 94309013
Centisome position: 1.97
GC content: 69.14
Gene sequence:
>648_bases ATGACCATCGCCTCCGCTCTCCGATTCACCGCGCTGGGCCTGCTGATCGCACTGTCGGGCTGCAGCGTGCTGTCCTCGCA GCCGCCTTCGACCACCTATGACTTCGGCCCGCTGGCAGCGGCGCCATCTCAGCCGCCGGCACCGTTGCCAAAGCTGCGCA TCACGCAGACCGACGGGCCGGTCTGGATGGACGGCAGCGGCATCTACTACCGGCTCCAGTACACGCAGGCGCAGCGGCTG CAGGCTTACTCGACGCAGCGTTGGGTAGACTCCCCGCAGCACCTGTTCAACGATCGCCTCCGCGACGCGGTGGCCGCTCG CGGCCCGCTGTCATGGTCGGGCGATACGACGATCCCGGCGCTCAAGGTCGACCTGCTCGCCTTCGAACAGGTTTTCGACT CCCCGACCAGCAGCCGCGGCGTGGTTCGAGCCCGCGCGACGGTCTACCACAAGGGCTTGATCGGACAGAAAACGTTCGTC GCCGAACAGCCGGCGCCAAGCGCGGACGGCCAGGGTGGCGTCAAGGCACTTTCGGCCGGCGTCGATGCCGTAATCGCCGC GATCCTCGACTGGACCGCGACGCTCCCGCTCGATGGCGCGCAGGCATCGAGCGCGCCGCCGGCCCCGCCGGCTCCGCAGC GCCGATGA
Upstream 100 bases:
>100_bases TCGGCGGGCCATCGCCCACGCCTGGCCCGGGCGAGCCGGGTTTCCAGGCGCCCTGATCCGCAGCGCCCAACATTTGACGG TAACTCGACGGAAATTCACC
Downstream 100 bases:
>100_bases GCGTAGAGTGGTAGCCGTGTCGGTCACATTGCTCGCCGTCTTACCGTAGTCATGGCACAGGCAACGCCCCCGCCCTCTCC CCACTCCCCCGCGCCTCCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: ABC-Type Transport System Auxiliary Component-Like Protein; Transcriptional Regulator; ABC-Type Transporter Auxiliary Component; Exported Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGPVWMDGSGIYYRLQYTQAQRL QAYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIPALKVDLLAFEQVFDSPTSSRGVVRARATVYHKGLIGQKTFV AEQPAPSADGQGGVKALSAGVDAVIAAILDWTATLPLDGAQASSAPPAPPAPQRR
Sequences:
>Translated_215_residues MTIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGPVWMDGSGIYYRLQYTQAQRL QAYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIPALKVDLLAFEQVFDSPTSSRGVVRARATVYHKGLIGQKTFV AEQPAPSADGQGGVKALSAGVDAVIAAILDWTATLPLDGAQASSAPPAPPAPQRR >Mature_214_residues TIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGPVWMDGSGIYYRLQYTQAQRLQ AYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIPALKVDLLAFEQVFDSPTSSRGVVRARATVYHKGLIGQKTFVA EQPAPSADGQGGVKALSAGVDAVIAAILDWTATLPLDGAQASSAPPAPPAPQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22737; Mature: 22606
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGP CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VWMDGSGIYYRLQYTQAQRLQAYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIPA EEECCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH LKVDLLAFEQVFDSPTSSRGVVRARATVYHKGLIGQKTFVAEQPAPSADGQGGVKALSAG HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHH VDAVIAAILDWTATLPLDGAQASSAPPAPPAPQRR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGP CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VWMDGSGIYYRLQYTQAQRLQAYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIPA EEECCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH LKVDLLAFEQVFDSPTSSRGVVRARATVYHKGLIGQKTFVAEQPAPSADGQGGVKALSAG HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHH VDAVIAAILDWTATLPLDGAQASSAPPAPPAPQRR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA