| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is lip2 [H]
Identifier: 93007282
GI number: 93007282
Start: 3037053
End: 3038504
Strand: Direct
Name: lip2 [H]
Synonym: Pcryo_2458
Alternate gene names: 93007282
Gene position: 3037053-3038504 (Clockwise)
Preceding gene: 93007279
Following gene: 93007292
Centisome position: 99.25
GC content: 42.84
Gene sequence:
>1452_bases ATGTCTAACTCAACAGTACTATCAGTCAACACCTTACTCAATAAAGCGGTGAAGACCCTAAATCTTATGTCATTTGGACA AGATAAGAACCCCAAAAGCACTGATATCAATATATCAGCTGAAATAATGGATATAGATGAGAGTGCTTTGCAAGATAGTC GCGAGGATAAAGGCTTATCTATTAAAGAAAAGATACTCGAGCACCATCTGATGACCAACTATCAACCGCATCTACTGCAC TATGCCATAAAAAGCTTTGGCTGCTTACCTACGCCGATTCTTGAGAGTTTGATAAAGTGTTTAGATGGACCTACTTCAAA GCAATACTTGCATGTTGATGCCCATCTGCGCTTAATACTTGCAGTCAATAGCAAGCTAAAAACGCCTTTGCAGCTGATAG AGATGTCTGAGCTGCGTAAACGCTTTGCAACAGATGCGGTCGCTATGCAAGCACCAAAAGTATGGCAGCAGGCTTCTGAC AACTTGCTTAGCAATTTGAAACAGTTTCATAAAAAAGGCGATAGCGCCATCAGTTGGCAAGATAGAACGATTGCCAATGC CGACGACGGTGATATGACCATTCGCTGCTATCAAAATGAGACCTCTGATAATGGTTTTGGCTTTAAAAAAGAGCAGACCA GTAATCCTGATGAGACCGTGCTATTGTTTTTTCATGGTGGTGGATTTTGTATTGGTGACCTTAATACCCATCATGAATTT TGTCATGCTATTTGTGAGCAGACGGGTTGGCCGGTCATTAGTGTTGATTATCGCTTAGCACCTGAACACCCTGCCCCTGC TGCCGTAAGAGACTGTATCAGTGCCTATGCTTGGTTAGCTGAACATTGTGAAGAATTTGGTGCTTTGCCATCACGCATTG TATTAGCAGGTGATAGCGCAGGTGGTGGATTATCTACTTTGATGGCTCAGCAAATCATCACGCCAAATAAAGAGGCTTGG TTGGATCTAGGTGATGAAGGTCAAAAGACCTTTGATATATTACAAGGTTTACCACATCCTATGGCACAGATGCCCTTATA TCCTGTGACCGATATTGAGACCGATTATCCAAGCTGGGAATTATATGGTGAAGGTCTACTACTCGACCATGCTGATGTTG CCATTTTTGATGCCGCTTGTTTAGAAAATAGTCCGTTACCGCGTCAGCATATCCTGACCTCACCGATGCTTGGGGACAAT CGACAGGTTTGTCCCAGTTATGTCGTTGCAGCAGAATTAGATGTCTTACGTGATGAAGCGTTTGCTTATGCCGATCAGCT AAAGAGTTATGGTATAGCCGTACAAACCCATACGGTACTTGGCGCACCGCATGGATTTATTCACTTTATGAGCGTTCATC AAAGATTAGGGCAAGAAACTCAGCATATCATCACAGGGTTTGCTAATTTTGTGCGTGAAATCATAAAAACAAGGGCGCTA TTGAGCGCTTAA
Upstream 100 bases:
>100_bases GACTGCATAACAGTCATTACACATTTGCCAAATGTCAGCAAAATACTAACAGTGAATACTTACCATTAATAAGTATTCAC CATGATTTTTAAGAGGTGTT
Downstream 100 bases:
>100_bases TGAGAATTTTAATATTTGAGTGCTTATTGATCTTAAGTTTGAGTACCTACATTGGTACCTGTAAGATTGATTATCCAAAT CTCTGATCGGGAGCCTAGTC
Product: alpha/beta hydrolase fold protein-3
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSNSTVLSVNTLLNKAVKTLNLMSFGQDKNPKSTDINISAEIMDIDESALQDSREDKGLSIKEKILEHHLMTNYQPHLLH YAIKSFGCLPTPILESLIKCLDGPTSKQYLHVDAHLRLILAVNSKLKTPLQLIEMSELRKRFATDAVAMQAPKVWQQASD NLLSNLKQFHKKGDSAISWQDRTIANADDGDMTIRCYQNETSDNGFGFKKEQTSNPDETVLLFFHGGGFCIGDLNTHHEF CHAICEQTGWPVISVDYRLAPEHPAPAAVRDCISAYAWLAEHCEEFGALPSRIVLAGDSAGGGLSTLMAQQIITPNKEAW LDLGDEGQKTFDILQGLPHPMAQMPLYPVTDIETDYPSWELYGEGLLLDHADVAIFDAACLENSPLPRQHILTSPMLGDN RQVCPSYVVAAELDVLRDEAFAYADQLKSYGIAVQTHTVLGAPHGFIHFMSVHQRLGQETQHIITGFANFVREIIKTRAL LSA
Sequences:
>Translated_483_residues MSNSTVLSVNTLLNKAVKTLNLMSFGQDKNPKSTDINISAEIMDIDESALQDSREDKGLSIKEKILEHHLMTNYQPHLLH YAIKSFGCLPTPILESLIKCLDGPTSKQYLHVDAHLRLILAVNSKLKTPLQLIEMSELRKRFATDAVAMQAPKVWQQASD NLLSNLKQFHKKGDSAISWQDRTIANADDGDMTIRCYQNETSDNGFGFKKEQTSNPDETVLLFFHGGGFCIGDLNTHHEF CHAICEQTGWPVISVDYRLAPEHPAPAAVRDCISAYAWLAEHCEEFGALPSRIVLAGDSAGGGLSTLMAQQIITPNKEAW LDLGDEGQKTFDILQGLPHPMAQMPLYPVTDIETDYPSWELYGEGLLLDHADVAIFDAACLENSPLPRQHILTSPMLGDN RQVCPSYVVAAELDVLRDEAFAYADQLKSYGIAVQTHTVLGAPHGFIHFMSVHQRLGQETQHIITGFANFVREIIKTRAL LSA >Mature_482_residues SNSTVLSVNTLLNKAVKTLNLMSFGQDKNPKSTDINISAEIMDIDESALQDSREDKGLSIKEKILEHHLMTNYQPHLLHY AIKSFGCLPTPILESLIKCLDGPTSKQYLHVDAHLRLILAVNSKLKTPLQLIEMSELRKRFATDAVAMQAPKVWQQASDN LLSNLKQFHKKGDSAISWQDRTIANADDGDMTIRCYQNETSDNGFGFKKEQTSNPDETVLLFFHGGGFCIGDLNTHHEFC HAICEQTGWPVISVDYRLAPEHPAPAAVRDCISAYAWLAEHCEEFGALPSRIVLAGDSAGGGLSTLMAQQIITPNKEAWL DLGDEGQKTFDILQGLPHPMAQMPLYPVTDIETDYPSWELYGEGLLLDHADVAIFDAACLENSPLPRQHILTSPMLGDNR QVCPSYVVAAELDVLRDEAFAYADQLKSYGIAVQTHTVLGAPHGFIHFMSVHQRLGQETQHIITGFANFVREIIKTRALL SA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21328446, Length=97, Percent_Identity=40.2061855670103, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI157041239, Length=133, Percent_Identity=30.8270676691729, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI61966717, Length=306, Percent_Identity=23.8562091503268, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI206597554, Length=309, Percent_Identity=26.537216828479, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI68299767, Length=292, Percent_Identity=24.3150684931507, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI157041237, Length=80, Percent_Identity=35, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI1786682, Length=271, Percent_Identity=28.0442804428044, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17567059, Length=319, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI72001146, Length=206, Percent_Identity=28.1553398058252, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71996133, Length=167, Percent_Identity=30.5389221556886, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17540028, Length=154, Percent_Identity=30.5194805194805, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533410, Length=92, Percent_Identity=34.7826086956522, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533412, Length=92, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656084, Length=98, Percent_Identity=38.7755102040816, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24656076, Length=98, Percent_Identity=38.7755102040816, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI20130169, Length=98, Percent_Identity=38.7755102040816, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 53574; Mature: 53443
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS01173 LIPASE_GDXG_HIS ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSTVLSVNTLLNKAVKTLNLMSFGQDKNPKSTDINISAEIMDIDESALQDSREDKGLS CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCC IKEKILEHHLMTNYQPHLLHYAIKSFGCLPTPILESLIKCLDGPTSKQYLHVDAHLRLIL HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECHHEEEEE AVNSKLKTPLQLIEMSELRKRFATDAVAMQAPKVWQQASDNLLSNLKQFHKKGDSAISWQ EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DRTIANADDGDMTIRCYQNETSDNGFGFKKEQTSNPDETVLLFFHGGGFCIGDLNTHHEF CCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCHHHHH CHAICEQTGWPVISVDYRLAPEHPAPAAVRDCISAYAWLAEHCEEFGALPSRIVLAGDSA HHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC GGGLSTLMAQQIITPNKEAWLDLGDEGQKTFDILQGLPHPMAQMPLYPVTDIETDYPSWE CCHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCE LYGEGLLLDHADVAIFDAACLENSPLPRQHILTSPMLGDNRQVCPSYVVAAELDVLRDEA EECCCEEEECCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FAYADQLKSYGIAVQTHTVLGAPHGFIHFMSVHQRLGQETQHIITGFANFVREIIKTRAL HHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LSA HCC >Mature Secondary Structure SNSTVLSVNTLLNKAVKTLNLMSFGQDKNPKSTDINISAEIMDIDESALQDSREDKGLS CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCC IKEKILEHHLMTNYQPHLLHYAIKSFGCLPTPILESLIKCLDGPTSKQYLHVDAHLRLIL HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECHHEEEEE AVNSKLKTPLQLIEMSELRKRFATDAVAMQAPKVWQQASDNLLSNLKQFHKKGDSAISWQ EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DRTIANADDGDMTIRCYQNETSDNGFGFKKEQTSNPDETVLLFFHGGGFCIGDLNTHHEF CCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCHHHHH CHAICEQTGWPVISVDYRLAPEHPAPAAVRDCISAYAWLAEHCEEFGALPSRIVLAGDSA HHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC GGGLSTLMAQQIITPNKEAWLDLGDEGQKTFDILQGLPHPMAQMPLYPVTDIETDYPSWE CCHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCE LYGEGLLLDHADVAIFDAACLENSPLPRQHILTSPMLGDNRQVCPSYVVAAELDVLRDEA EECCCEEEECCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FAYADQLKSYGIAVQTHTVLGAPHGFIHFMSVHQRLGQETQHIITGFANFVREIIKTRAL HHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LSA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]