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The map label for this gene is ypfJ [H]

Identifier: 93007119

GI number: 93007119

Start: 2822712

End: 2823596

Strand: Reverse

Name: ypfJ [H]

Synonym: Pcryo_2295

Alternate gene names: 93007119

Gene position: 2823596-2822712 (Counterclockwise)

Preceding gene: 93007121

Following gene: 93007115

Centisome position: 92.28

GC content: 47.23

Gene sequence:

>885_bases
ATGAAATGGCAAGGCAGACGTGGCAGTACTAATGTGCGTACTAGTAGTGGTGGCGGTAAGCTAATGGGCGGCGGTATCGG
CGGTATCATTATTGCTGGTATTTTATGGCTAGTGTTTGGGGTAAATCCCATGACCGCATTGCAAACAGGTCAAGAGGTCG
CAGGCGGTGGTAATACATCTACTGAACCAGCTACCAGTGACGATCGGGATACACAGTTTGTCAAAGTTGTCTTGGCAGAT
ACTGAAGAGGTTTGGCATCAAATATTCAATGAGGGGGGTAGTACATATAAAGAGCCGTCACTGATTTTGTTTAATGGGCA
AGTCAGTTCTGCTTGTGGTAGTGCCAGTTCAGCGACTGGTCCTTTTTATTGCCCAGGTGATCAAACGGTCTATTTAGATA
CGTCGTTTTTCGTAGAGATGCGTCAAAAGCTTGGTATCTCTGGTGATATCCAAAACTCCGGGGATAGTGACAATCAGAAC
AAAGCGGGCGATTTTGCCCAAGCCTATGTGATCTCCCATGAAGTAGGTCACCATGTACAGACTTTGCTTGGTATTACTCA
GCAAGTAAATGAGGCCAGCCGTCAAGTGACTCGGGCACAAGCAAATAAATTGTCTGTCCTACAAGAGCTACAAGCTGATT
GCTTTGCTGGTGTTTGGGCGCAGCGCAATCAAGAGCGCGTACAGTTTTTAGAAGCAGGTGATATCGACGAAGCTATCAAT
GCTGCTGGTCAGATTGGTGATGATCGCTTAGCACGTGCAGGAGGCGGGGCGGTAGTACCTGATAACTTTACTCATGGTAC
TAGCCAACAGCGTGTAGAGTGGTTTACGCGCGGTCTAGAGAGCGGTAATGTGCAAACTTGTGATACGTTTAGCGGTGCTT
TATAG

Upstream 100 bases:

>100_bases
TATCAAGATATGACATCAAAGGATTGAGCTAAAAACTATATAACATGAATCATGATCGATATGAGTGGCATAAGATATCG
TATTTTTTGGGAGAAGGATT

Downstream 100 bases:

>100_bases
CACTGATTATTATAAAACCAGTTATATTGATTGGTATAGTTAAAATATCTCAAAAACGCTACAGTGCTGCTGGTATAAAT
TTTTTGCAGCCTCTGTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKWQGRRGSTNVRTSSGGGKLMGGGIGGIIIAGILWLVFGVNPMTALQTGQEVAGGGNTSTEPATSDDRDTQFVKVVLAD
TEEVWHQIFNEGGSTYKEPSLILFNGQVSSACGSASSATGPFYCPGDQTVYLDTSFFVEMRQKLGISGDIQNSGDSDNQN
KAGDFAQAYVISHEVGHHVQTLLGITQQVNEASRQVTRAQANKLSVLQELQADCFAGVWAQRNQERVQFLEAGDIDEAIN
AAGQIGDDRLARAGGGAVVPDNFTHGTSQQRVEWFTRGLESGNVQTCDTFSGAL

Sequences:

>Translated_294_residues
MKWQGRRGSTNVRTSSGGGKLMGGGIGGIIIAGILWLVFGVNPMTALQTGQEVAGGGNTSTEPATSDDRDTQFVKVVLAD
TEEVWHQIFNEGGSTYKEPSLILFNGQVSSACGSASSATGPFYCPGDQTVYLDTSFFVEMRQKLGISGDIQNSGDSDNQN
KAGDFAQAYVISHEVGHHVQTLLGITQQVNEASRQVTRAQANKLSVLQELQADCFAGVWAQRNQERVQFLEAGDIDEAIN
AAGQIGDDRLARAGGGAVVPDNFTHGTSQQRVEWFTRGLESGNVQTCDTFSGAL
>Mature_294_residues
MKWQGRRGSTNVRTSSGGGKLMGGGIGGIIIAGILWLVFGVNPMTALQTGQEVAGGGNTSTEPATSDDRDTQFVKVVLAD
TEEVWHQIFNEGGSTYKEPSLILFNGQVSSACGSASSATGPFYCPGDQTVYLDTSFFVEMRQKLGISGDIQNSGDSDNQN
KAGDFAQAYVISHEVGHHVQTLLGITQQVNEASRQVTRAQANKLSVLQELQADCFAGVWAQRNQERVQFLEAGDIDEAIN
AAGQIGDDRLARAGGGAVVPDNFTHGTSQQRVEWFTRGLESGNVQTCDTFSGAL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=305, Percent_Identity=44.2622950819672, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31285; Mature: 31285

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQGRRGSTNVRTSSGGGKLMGGGIGGIIIAGILWLVFGVNPMTALQTGQEVAGGGNTS
CCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCC
TEPATSDDRDTQFVKVVLADTEEVWHQIFNEGGSTYKEPSLILFNGQVSSACGSASSATG
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCCCC
PFYCPGDQTVYLDTSFFVEMRQKLGISGDIQNSGDSDNQNKAGDFAQAYVISHEVGHHVQ
CEECCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLLGITQQVNEASRQVTRAQANKLSVLQELQADCFAGVWAQRNQERVQFLEAGDIDEAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
AAGQIGDDRLARAGGGAVVPDNFTHGTSQQRVEWFTRGLESGNVQTCDTFSGAL
HHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MKWQGRRGSTNVRTSSGGGKLMGGGIGGIIIAGILWLVFGVNPMTALQTGQEVAGGGNTS
CCCCCCCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCC
TEPATSDDRDTQFVKVVLADTEEVWHQIFNEGGSTYKEPSLILFNGQVSSACGSASSATG
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCCCC
PFYCPGDQTVYLDTSFFVEMRQKLGISGDIQNSGDSDNQNKAGDFAQAYVISHEVGHHVQ
CEECCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TLLGITQQVNEASRQVTRAQANKLSVLQELQADCFAGVWAQRNQERVQFLEAGDIDEAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
AAGQIGDDRLARAGGGAVVPDNFTHGTSQQRVEWFTRGLESGNVQTCDTFSGAL
HHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]