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The map label for this gene is ysgA [C]

Identifier: 93007105

GI number: 93007105

Start: 2800896

End: 2801633

Strand: Direct

Name: ysgA [C]

Synonym: Pcryo_2281

Alternate gene names: 93007105

Gene position: 2800896-2801633 (Clockwise)

Preceding gene: 93007103

Following gene: 93007106

Centisome position: 91.54

GC content: 45.53

Gene sequence:

>738_bases
ATGTCAATTAAGACGTTTGAATTAATCAGTACCACTGAAAATGGTATTCAATTGATTAGCTATGTCGCATTACCAGAAAA
TGCGACAGATGATAATCCTGTCGCTGGCATTTTGGTCGCGCCCGAATGGTGGGGCGTAGTCGAGCATCCAAAGAATGTCA
CTGAACGCTTAGCAAAAGCAGGCTACGCCGCGGTCGCTATGGACGTATACGGTGAAGGTAAACTGACTTCTGATGCTGCA
CAAGCAAATCTGTGGATGGAGCAAGTATTAGCCGATCAAGATATGCTGATGGCGCGCTGCCGTTTGATTCTCAATGACTT
TAGTGATCAACTAGCCGTTGATAGCGATAAGTTAGGTGCAATTGGCTATTGCTTTGGTGGCAAAATCGTCCTTGATATGG
CGCGCGAAGGTATGCCCTTAAAAGCAGTCGCTACTTTCCACGGCAACCCATCACCGAAGCAGCCTGCCAATGAGCAGTTC
ACTGCTAAAGTATTGGTTGCTCATGGTCGTGATGACTCTATGGTATCTATGGATGCGATAGAAGGTCTTAAGTCAGAGCT
AGATGCGGCGAACGTTGATTACACTATTGATGTTTATGATGGTGCTAAGCATGGCTTTACCAATCCAAATGCGGATGAGC
GCGCTGCTAAAAATGATGTTGATCTTGGTTATAACGAAACGGCGGCCAAACAGAGCTGGGACAATATGCTGGAGTTTATG
AAAGACAATTTGGCATAA

Upstream 100 bases:

>100_bases
TGGGCGTTATGGTAGTAAAGGTCAGCAAATAGATCACTCAAAAAATACAGATATCTGATACTTATAACGTAAATTTCATT
ACCTAAAAAAGGACAATACT

Downstream 100 bases:

>100_bases
TAGCTTTTTATACTACTTTGACATTCAATAAGCTTATTTAAGCCCTTTCAATTTCGTTGAATAAGCTCATTTGTGGCGTG
TTGGGCGCGTCACTCTTGTG

Product: dienelactone hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSIKTFELISTTENGIQLISYVALPENATDDNPVAGILVAPEWWGVVEHPKNVTERLAKAGYAAVAMDVYGEGKLTSDAA
QANLWMEQVLADQDMLMARCRLILNDFSDQLAVDSDKLGAIGYCFGGKIVLDMAREGMPLKAVATFHGNPSPKQPANEQF
TAKVLVAHGRDDSMVSMDAIEGLKSELDAANVDYTIDVYDGAKHGFTNPNADERAAKNDVDLGYNETAAKQSWDNMLEFM
KDNLA

Sequences:

>Translated_245_residues
MSIKTFELISTTENGIQLISYVALPENATDDNPVAGILVAPEWWGVVEHPKNVTERLAKAGYAAVAMDVYGEGKLTSDAA
QANLWMEQVLADQDMLMARCRLILNDFSDQLAVDSDKLGAIGYCFGGKIVLDMAREGMPLKAVATFHGNPSPKQPANEQF
TAKVLVAHGRDDSMVSMDAIEGLKSELDAANVDYTIDVYDGAKHGFTNPNADERAAKNDVDLGYNETAAKQSWDNMLEFM
KDNLA
>Mature_244_residues
SIKTFELISTTENGIQLISYVALPENATDDNPVAGILVAPEWWGVVEHPKNVTERLAKAGYAAVAMDVYGEGKLTSDAAQ
ANLWMEQVLADQDMLMARCRLILNDFSDQLAVDSDKLGAIGYCFGGKIVLDMAREGMPLKAVATFHGNPSPKQPANEQFT
AKVLVAHGRDDSMVSMDAIEGLKSELDAANVDYTIDVYDGAKHGFTNPNADERAAKNDVDLGYNETAAKQSWDNMLEFMK
DNLA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=252, Percent_Identity=28.968253968254, Blast_Score=88, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17532655, Length=245, Percent_Identity=31.0204081632653, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17532653, Length=215, Percent_Identity=32.5581395348837, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI193204305, Length=211, Percent_Identity=29.8578199052133, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17536419, Length=229, Percent_Identity=28.3842794759825, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534829, Length=153, Percent_Identity=34.640522875817, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17536415, Length=133, Percent_Identity=27.8195488721804, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 26666; Mature: 26535

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKTFELISTTENGIQLISYVALPENATDDNPVAGILVAPEWWGVVEHPKNVTERLAKA
CCCEEEEEECCCCCHHEEEHEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHC
GYAAVAMDVYGEGKLTSDAAQANLWMEQVLADQDMLMARCRLILNDFSDQLAVDSDKLGA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCCE
IGYCFGGKIVLDMAREGMPLKAVATFHGNPSPKQPANEQFTAKVLVAHGRDDSMVSMDAI
EEEEECCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHH
EGLKSELDAANVDYTIDVYDGAKHGFTNPNADERAAKNDVDLGYNETAAKQSWDNMLEFM
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
KDNLA
HHCCC
>Mature Secondary Structure 
SIKTFELISTTENGIQLISYVALPENATDDNPVAGILVAPEWWGVVEHPKNVTERLAKA
CCEEEEEECCCCCHHEEEHEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHC
GYAAVAMDVYGEGKLTSDAAQANLWMEQVLADQDMLMARCRLILNDFSDQLAVDSDKLGA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCCE
IGYCFGGKIVLDMAREGMPLKAVATFHGNPSPKQPANEQFTAKVLVAHGRDDSMVSMDAI
EEEEECCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHH
EGLKSELDAANVDYTIDVYDGAKHGFTNPNADERAAKNDVDLGYNETAAKQSWDNMLEFM
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
KDNLA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]