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The map label for this gene is pilJ [H]

Identifier: 93006922

GI number: 93006922

Start: 2571430

End: 2572851

Strand: Reverse

Name: pilJ [H]

Synonym: Pcryo_2098

Alternate gene names: 93006922

Gene position: 2572851-2571430 (Counterclockwise)

Preceding gene: 93006923

Following gene: 93006921

Centisome position: 84.08

GC content: 45.08

Gene sequence:

>1422_bases
ATGAGTGATGTTATAAATAACCCTGTAAGCGGTGTAAATAAAGCTGCGACAAATGCAAACAGTCAATGGAAACTATTACT
AGGCGGTTGTGCTCTAGTGGCTATGGGTGCTCTATTGGCGCTGATCAATGCCATATCCTCGGTCAGTGAGTATTTAACCG
ATTTCAATCAAGCTGTCATAATACCGGTAGTTGTCTTTGTGCTCAGTGTACTGGGTATCTTTTTCGCTTTTTATAAGTTG
CTACAGCAGCGCGGTGGCTCAGAACGTCTCCTTATTGAAAAAGAGACCTTACGTCGTCGTCAAGAAGCGGAAGCTGAGTC
TGAACGTGCGCGCCAAATCCAAGAAGAAAACGAGCGTAACCAGATTGCTATTTTGCGCCTACTTGATGAGTTGGGTGATT
TGGCAGACGGAGATTTGACGGTCAATGCAACAGTATCAGAAGACTTCACTGGTGCAATTGCCGACTCTGTCAACTTTGCT
ATCGACCAACTACGCCAATTGGTACTGGTTATTAACAGTACCGCAGATCGCGTTTCGCAGTCATCAGAGCAAACACAGAT
GAATGCAGTCGAGCTTGCGGCAGCCTCTGAGCATCAAGCACAAGAAATCGCTGGTGTATCTGCGGCTATTAATGAGATGA
CGGTGTCTATTGACCAAGTTTCAAATAACGCTGCAGAATCTGCAACGGTTGCTCAGCGTTCGGTTGCCATCTCTTACAAT
GGAGCAGAAGTAGTACAGCGCTCTATTGAAGGTATGAACGTTATCCGTGATCAGATTCAAGAAACCTCGAAACGTATTAA
ACGTCTTGGTGAGTCTTCGCAGGAAATTGGTGATATCGTTGGTTTGATTAACGATATTGCAGACCAAACTAACGTTTTGG
CATTAAACGCAGCGATTCAGGCATCGATGGCAGGTGAAGCAGGACGAGGATTTGCGGTTGTTGCTGATGAGGTTCAGCGT
CTTGCTGAGCGTTCGGCAAATGCAACCAAACAGATTGAGACGTTGGTAAAAACCATTCAAGCAGATACCAGTGAAGCGGT
CATGTCGATGGAATCAACGACGTCTGAAGTCGTACGTGGTGCGCGGTTGGCAAAAGATGCGGGTGAAGCACTAGAAGAGG
TGCAAACCGTTTCTAATACTTTGGCGGATCTTATTCAGAATATTTCAAATGCTGCTCTGCAACAGGCGGAGTCGGCAGGT
CATATTTCTCATACTATGAACATTATTCAAGATATTACCTCTCAAACGTCTTCTGGTACGATGGCGACTGCACGTTCTAT
TGGTGAGCTAAGCGAAATGGCTGCAGCACTACAAGAATCAGTCACCGGCTTTAAAATATCAAATGATGATGAGCAGTTGA
ATCATGAAAGCATGGATCATGAATATCTCGATATGGATGAGAGAGTCTCAGCCAGTATGTAA

Upstream 100 bases:

>100_bases
ATTCATACAGGCTTTGTTCATCACGGTTGTTTTGATAACACTATGATTTCAGAGTCAGTCACAATAAGACTTTGATGATT
GTTTGAAAGGAATAAGTGCG

Downstream 100 bases:

>100_bases
TAACTGTCGATAATAGCTATAATTTTTCCTATGGAAATGTTAACCAAATTGCTGCTCTAAATAGACATTATAAAATTTGG
AGCAGCAACATTAATAGCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSDVINNPVSGVNKAATNANSQWKLLLGGCALVAMGALLALINAISSVSEYLTDFNQAVIIPVVVFVLSVLGIFFAFYKL
LQQRGGSERLLIEKETLRRRQEAEAESERARQIQEENERNQIAILRLLDELGDLADGDLTVNATVSEDFTGAIADSVNFA
IDQLRQLVLVINSTADRVSQSSEQTQMNAVELAAASEHQAQEIAGVSAAINEMTVSIDQVSNNAAESATVAQRSVAISYN
GAEVVQRSIEGMNVIRDQIQETSKRIKRLGESSQEIGDIVGLINDIADQTNVLALNAAIQASMAGEAGRGFAVVADEVQR
LAERSANATKQIETLVKTIQADTSEAVMSMESTTSEVVRGARLAKDAGEALEEVQTVSNTLADLIQNISNAALQQAESAG
HISHTMNIIQDITSQTSSGTMATARSIGELSEMAAALQESVTGFKISNDDEQLNHESMDHEYLDMDERVSASM

Sequences:

>Translated_473_residues
MSDVINNPVSGVNKAATNANSQWKLLLGGCALVAMGALLALINAISSVSEYLTDFNQAVIIPVVVFVLSVLGIFFAFYKL
LQQRGGSERLLIEKETLRRRQEAEAESERARQIQEENERNQIAILRLLDELGDLADGDLTVNATVSEDFTGAIADSVNFA
IDQLRQLVLVINSTADRVSQSSEQTQMNAVELAAASEHQAQEIAGVSAAINEMTVSIDQVSNNAAESATVAQRSVAISYN
GAEVVQRSIEGMNVIRDQIQETSKRIKRLGESSQEIGDIVGLINDIADQTNVLALNAAIQASMAGEAGRGFAVVADEVQR
LAERSANATKQIETLVKTIQADTSEAVMSMESTTSEVVRGARLAKDAGEALEEVQTVSNTLADLIQNISNAALQQAESAG
HISHTMNIIQDITSQTSSGTMATARSIGELSEMAAALQESVTGFKISNDDEQLNHESMDHEYLDMDERVSASM
>Mature_472_residues
SDVINNPVSGVNKAATNANSQWKLLLGGCALVAMGALLALINAISSVSEYLTDFNQAVIIPVVVFVLSVLGIFFAFYKLL
QQRGGSERLLIEKETLRRRQEAEAESERARQIQEENERNQIAILRLLDELGDLADGDLTVNATVSEDFTGAIADSVNFAI
DQLRQLVLVINSTADRVSQSSEQTQMNAVELAAASEHQAQEIAGVSAAINEMTVSIDQVSNNAAESATVAQRSVAISYNG
AEVVQRSIEGMNVIRDQIQETSKRIKRLGESSQEIGDIVGLINDIADQTNVLALNAAIQASMAGEAGRGFAVVADEVQRL
AERSANATKQIETLVKTIQADTSEAVMSMESTTSEVVRGARLAKDAGEALEEVQTVSNTLADLIQNISNAALQQAESAGH
ISHTMNIIQDITSQTSSGTMATARSIGELSEMAAALQESVTGFKISNDDEQLNHESMDHEYLDMDERVSASM

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=326, Percent_Identity=27.6073619631902, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=28.8819875776398, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787690, Length=314, Percent_Identity=28.6624203821656, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=268, Percent_Identity=28.7313432835821, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1789453, Length=391, Percent_Identity=28.1329923273657, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50732; Mature: 50601

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVINNPVSGVNKAATNANSQWKLLLGGCALVAMGALLALINAISSVSEYLTDFNQAVI
CCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IPVVVFVLSVLGIFFAFYKLLQQRGGSERLLIEKETLRRRQEAEAESERARQIQEENERN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
QIAILRLLDELGDLADGDLTVNATVSEDFTGAIADSVNFAIDQLRQLVLVINSTADRVSQ
HHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC
SSEQTQMNAVELAAASEHQAQEIAGVSAAINEMTVSIDQVSNNAAESATVAQRSVAISYN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECC
GAEVVQRSIEGMNVIRDQIQETSKRIKRLGESSQEIGDIVGLINDIADQTNVLALNAAIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHH
ASMAGEAGRGFAVVADEVQRLAERSANATKQIETLVKTIQADTSEAVMSMESTTSEVVRG
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLAKDAGEALEEVQTVSNTLADLIQNISNAALQQAESAGHISHTMNIIQDITSQTSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
MATARSIGELSEMAAALQESVTGFKISNDDEQLNHESMDHEYLDMDERVSASM
HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCHHHCCCHHCCCHHHHHCCC
>Mature Secondary Structure 
SDVINNPVSGVNKAATNANSQWKLLLGGCALVAMGALLALINAISSVSEYLTDFNQAVI
CCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IPVVVFVLSVLGIFFAFYKLLQQRGGSERLLIEKETLRRRQEAEAESERARQIQEENERN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
QIAILRLLDELGDLADGDLTVNATVSEDFTGAIADSVNFAIDQLRQLVLVINSTADRVSQ
HHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC
SSEQTQMNAVELAAASEHQAQEIAGVSAAINEMTVSIDQVSNNAAESATVAQRSVAISYN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECC
GAEVVQRSIEGMNVIRDQIQETSKRIKRLGESSQEIGDIVGLINDIADQTNVLALNAAIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHH
ASMAGEAGRGFAVVADEVQRLAERSANATKQIETLVKTIQADTSEAVMSMESTTSEVVRG
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLAKDAGEALEEVQTVSNTLADLIQNISNAALQQAESAGHISHTMNIIQDITSQTSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
MATARSIGELSEMAAALQESVTGFKISNDDEQLNHESMDHEYLDMDERVSASM
HHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCHHHCCCHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]