| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006910
Identifier: 93006910
GI number: 93006910
Start: 2553416
End: 2554864
Strand: Reverse
Name: 93006910
Synonym: Pcryo_2086
Alternate gene names: NA
Gene position: 2554864-2553416 (Counterclockwise)
Preceding gene: 93006911
Following gene: 93006909
Centisome position: 83.5
GC content: 45.0
Gene sequence:
>1449_bases ATGAATATCACGACAGTGACAAGCCGTAAAATCTTACCGACTACTTTAGCTGCTGCACTGACAGGTATATTGATGGTATC AGGTTGTAGCAAACAGTCTGATGAAAAAGCGACCACAGATGTACCAGTTGAAACCGCAGAGAAAACAGCTAGCAAAACTT CATCAGCTGCTGATAAAGCTCATATGGATCGCTTGCTTATCAGTTATGCGGATATGGCACATGCTGCATACAAAGATTCG TTAGAGATGGCAAAGCTTTTACAGAGCGCCGTCAATACTTATGTAGAAACACCAACGCAAGCAAACTTGGATGCTGCAAA AGCCGCTTATAAAGCCGCGCGCCAGCCATACTCACAGACTGAAGTATTTAGATTCGATGAAGGTTTTGTGACTGCCAACG ACAATCGTAATATTGGTAGTACGGACAGCTGGGAGGGGCAGGTGAATGCTTGGCCTTTAGATGAAGCATTGATTGACTAC GTAAGCGCTGACTATGAAGGCGAGTACAATAGTAAAGACAACATCATTAATAGCGATAGCATTAGCGTTGGTAGCCTCAA GCAAGATACCAGTACCATCACGCCTGAGCTGCTCGCAGAGATGAATGAGATTGGTGGTAGTGAATCCAATGTGACCACAG GCTACCATGCTATTGAGTTTATGCTATGGGGTCAAGATACCAATGGCGTCGCTGAAGGTGCTGGCAACCGCCCGTTCAGT GATTATCTAATGACTGACGGTCAATGCACTAGCGGCGAGAGTGTCAATCCTGAGGCTAGTATCTGTGAGCGCCGCGGACA GTATCTAAAAGCAGCAACTCAACTACTGGTTGATGATTTGACCGCGATGGAAGCGCAGTGGCAACCTGACAGTGAAAACA CCTTGCGTAGCGACATGATGGCACGTAGGGATAGCAATAGTTTGCGCCAAATTATGTATCAAATGGGCAGCTTAGCACTT GGGGAGCTTGCCTCTCAGCGCATCCAAGTAGCGTTCGTCACTGGATCTACTGAAGATGAGCATGAGTGTTTTAGTGACTT GACACACTTAAGCTATGCCAATAACGCTCGCGGTATCCAGAATGTCTTTAATGGTAGTTACAAAACAGTCGCGGGCAAAA CCGTAGGTGGTTATGGACTGAAAAACTATCTTATCGATACAGGAAATACTGAAGCTGCTGATAAATTGGCTGCTGATTTT GCAAAAGTAGAAGCCGCCTTTAATGTCATTGTTGAAAAAGGTGAAAAAGAAAATATCAAGATTGATCAGATGATTGCCAC TGTAGGACAGGCGAGTAAACATGGTGTTTCTGCTGAAGAGCAAAACAAGCGTCGCGGTTGGATTGAAACTAGTATCACAA GTTTGCAAGAGCTGACAGCTGGTATTGAAAATGCCGCAAAAGCCGTCGGTATTGACAATTTAGATGCAGATGCAGGTTCG CAGTTTTAA
Upstream 100 bases:
>100_bases ATGCCCGATACAGTGCTGGTTTCGCCTATTTTCATTACTAGTATCGATGTGAAAGATTTATCTTATCTCTTCTTTATTTT GCAGCCCATCAAGGAAATCT
Downstream 100 bases:
>100_bases TTGCTCACTAATCTACTGTCTTAACAGCAAGCATAGCAGTGATTGACATAGCATTGATCGATAATGCCTAATGAGTCGCT AACAGTGAATGAGACTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNITTVTSRKILPTTLAAALTGILMVSGCSKQSDEKATTDVPVETAEKTASKTSSAADKAHMDRLLISYADMAHAAYKDS LEMAKLLQSAVNTYVETPTQANLDAAKAAYKAARQPYSQTEVFRFDEGFVTANDNRNIGSTDSWEGQVNAWPLDEALIDY VSADYEGEYNSKDNIINSDSISVGSLKQDTSTITPELLAEMNEIGGSESNVTTGYHAIEFMLWGQDTNGVAEGAGNRPFS DYLMTDGQCTSGESVNPEASICERRGQYLKAATQLLVDDLTAMEAQWQPDSENTLRSDMMARRDSNSLRQIMYQMGSLAL GELASQRIQVAFVTGSTEDEHECFSDLTHLSYANNARGIQNVFNGSYKTVAGKTVGGYGLKNYLIDTGNTEAADKLAADF AKVEAAFNVIVEKGEKENIKIDQMIATVGQASKHGVSAEEQNKRRGWIETSITSLQELTAGIENAAKAVGIDNLDADAGS QF
Sequences:
>Translated_482_residues MNITTVTSRKILPTTLAAALTGILMVSGCSKQSDEKATTDVPVETAEKTASKTSSAADKAHMDRLLISYADMAHAAYKDS LEMAKLLQSAVNTYVETPTQANLDAAKAAYKAARQPYSQTEVFRFDEGFVTANDNRNIGSTDSWEGQVNAWPLDEALIDY VSADYEGEYNSKDNIINSDSISVGSLKQDTSTITPELLAEMNEIGGSESNVTTGYHAIEFMLWGQDTNGVAEGAGNRPFS DYLMTDGQCTSGESVNPEASICERRGQYLKAATQLLVDDLTAMEAQWQPDSENTLRSDMMARRDSNSLRQIMYQMGSLAL GELASQRIQVAFVTGSTEDEHECFSDLTHLSYANNARGIQNVFNGSYKTVAGKTVGGYGLKNYLIDTGNTEAADKLAADF AKVEAAFNVIVEKGEKENIKIDQMIATVGQASKHGVSAEEQNKRRGWIETSITSLQELTAGIENAAKAVGIDNLDADAGS QF >Mature_482_residues MNITTVTSRKILPTTLAAALTGILMVSGCSKQSDEKATTDVPVETAEKTASKTSSAADKAHMDRLLISYADMAHAAYKDS LEMAKLLQSAVNTYVETPTQANLDAAKAAYKAARQPYSQTEVFRFDEGFVTANDNRNIGSTDSWEGQVNAWPLDEALIDY VSADYEGEYNSKDNIINSDSISVGSLKQDTSTITPELLAEMNEIGGSESNVTTGYHAIEFMLWGQDTNGVAEGAGNRPFS DYLMTDGQCTSGESVNPEASICERRGQYLKAATQLLVDDLTAMEAQWQPDSENTLRSDMMARRDSNSLRQIMYQMGSLAL GELASQRIQVAFVTGSTEDEHECFSDLTHLSYANNARGIQNVFNGSYKTVAGKTVGGYGLKNYLIDTGNTEAADKLAADF AKVEAAFNVIVEKGEKENIKIDQMIATVGQASKHGVSAEEQNKRRGWIETSITSLQELTAGIENAAKAVGIDNLDADAGS QF
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52118; Mature: 52118
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITTVTSRKILPTTLAAALTGILMVSGCSKQSDEKATTDVPVETAEKTASKTSSAADKA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HMDRLLISYADMAHAAYKDSLEMAKLLQSAVNTYVETPTQANLDAAKAAYKAARQPYSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC EVFRFDEGFVTANDNRNIGSTDSWEGQVNAWPLDEALIDYVSADYEGEYNSKDNIINSDS CEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC ISVGSLKQDTSTITPELLAEMNEIGGSESNVTTGYHAIEFMLWGQDTNGVAEGAGNRPFS CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHCCCCCCCCH DYLMTDGQCTSGESVNPEASICERRGQYLKAATQLLVDDLTAMEAQWQPDSENTLRSDMM HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ARRDSNSLRQIMYQMGSLALGELASQRIQVAFVTGSTEDEHECFSDLTHLSYANNARGIQ HHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH NVFNGSYKTVAGKTVGGYGLKNYLIDTGNTEAADKLAADFAKVEAAFNVIVEKGEKENIK HHHCCCCEEECCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IDQMIATVGQASKHGVSAEEQNKRRGWIETSITSLQELTAGIENAAKAVGIDNLDADAGS HHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QF CC >Mature Secondary Structure MNITTVTSRKILPTTLAAALTGILMVSGCSKQSDEKATTDVPVETAEKTASKTSSAADKA CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HMDRLLISYADMAHAAYKDSLEMAKLLQSAVNTYVETPTQANLDAAKAAYKAARQPYSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC EVFRFDEGFVTANDNRNIGSTDSWEGQVNAWPLDEALIDYVSADYEGEYNSKDNIINSDS CEEEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC ISVGSLKQDTSTITPELLAEMNEIGGSESNVTTGYHAIEFMLWGQDTNGVAEGAGNRPFS CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHCCCCCCCCH DYLMTDGQCTSGESVNPEASICERRGQYLKAATQLLVDDLTAMEAQWQPDSENTLRSDMM HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ARRDSNSLRQIMYQMGSLALGELASQRIQVAFVTGSTEDEHECFSDLTHLSYANNARGIQ HHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH NVFNGSYKTVAGKTVGGYGLKNYLIDTGNTEAADKLAADFAKVEAAFNVIVEKGEKENIK HHHCCCCEEECCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IDQMIATVGQASKHGVSAEEQNKRRGWIETSITSLQELTAGIENAAKAVGIDNLDADAGS HHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA