| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is ygjP [H]
Identifier: 93006663
GI number: 93006663
Start: 2270032
End: 2270520
Strand: Reverse
Name: ygjP [H]
Synonym: Pcryo_1839
Alternate gene names: 93006663
Gene position: 2270520-2270032 (Counterclockwise)
Preceding gene: 93006666
Following gene: 93006662
Centisome position: 74.2
GC content: 42.54
Gene sequence:
>489_bases GTGACCACCTTAAAATATATTGCTCATTATTCTGAGGATATCCAAAATCAAGCTGCCATGTTGATTAGTAGTGGCAAGTT GGGCGATTATTTGGATAAAAACTATCCCGAGAGACACCAAATCCAAAACGACAAAGCGTTATATCACTATATTAATGACA TAAAAAATCAGTATATGCGCAAAAGCAATCCATTGTCTCAAGTGACTTATAACAGTAAGCTCACCGTACTCAAACATGCG CTGGGTATTCATACTTACCAGTCTCGCGTGCAAGGCAGTAAGCTTAAAGCGCACAATAGCATTACGGTCGCAAGCTTATT CAAAGAGGCGCCGCCTGAGTTTTTGCGGATGATTGTTGTTCATGAGTTGGCGCACTTTAAGGAGCAGGAGCATAACAAAG CGTTCTATCAGCTGTGCTGTCATATGGAGCCTGATTATCATCAGTTGGAGCTGGATACGCGTTTGTGGTTGCAATGGCGC GAATGCTGA
Upstream 100 bases:
>100_bases CAGCCATTATCTATTTGAGCAAACTATTAAAGCAAAAAAATATCCTTACCGTATAATTGATATAGATAAATATCGCGCAT CAAGATAAAGGACAAAAGCA
Downstream 100 bases:
>100_bases TCTATCGTGGTTGGCATAATAAGGTGGATGAATAGGATAGGCTATGGTGTCGTCAGCGCAACAAGGGACTTTAGGCCATA AGCAAACCTGGCTCCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTTLKYIAHYSEDIQNQAAMLISSGKLGDYLDKNYPERHQIQNDKALYHYINDIKNQYMRKSNPLSQVTYNSKLTVLKHA LGIHTYQSRVQGSKLKAHNSITVASLFKEAPPEFLRMIVVHELAHFKEQEHNKAFYQLCCHMEPDYHQLELDTRLWLQWR EC
Sequences:
>Translated_162_residues MTTLKYIAHYSEDIQNQAAMLISSGKLGDYLDKNYPERHQIQNDKALYHYINDIKNQYMRKSNPLSQVTYNSKLTVLKHA LGIHTYQSRVQGSKLKAHNSITVASLFKEAPPEFLRMIVVHELAHFKEQEHNKAFYQLCCHMEPDYHQLELDTRLWLQWR EC >Mature_161_residues TTLKYIAHYSEDIQNQAAMLISSGKLGDYLDKNYPERHQIQNDKALYHYINDIKNQYMRKSNPLSQVTYNSKLTVLKHAL GIHTYQSRVQGSKLKAHNSITVASLFKEAPPEFLRMIVVHELAHFKEQEHNKAFYQLCCHMEPDYHQLELDTRLWLQWRE C
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=157, Percent_Identity=59.2356687898089, Blast_Score=199, Evalue=9e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 19166; Mature: 19035
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLKYIAHYSEDIQNQAAMLISSGKLGDYLDKNYPERHQIQNDKALYHYINDIKNQYMR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHH KSNPLSQVTYNSKLTVLKHALGIHTYQSRVQGSKLKAHNSITVASLFKEAPPEFLRMIVV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHH HELAHFKEQEHNKAFYQLCCHMEPDYHQLELDTRLWLQWREC HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHEEECCC >Mature Secondary Structure TTLKYIAHYSEDIQNQAAMLISSGKLGDYLDKNYPERHQIQNDKALYHYINDIKNQYMR CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHH KSNPLSQVTYNSKLTVLKHALGIHTYQSRVQGSKLKAHNSITVASLFKEAPPEFLRMIVV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHH HELAHFKEQEHNKAFYQLCCHMEPDYHQLELDTRLWLQWREC HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]