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The map label for this gene is rocF [H]

Identifier: 93006618

GI number: 93006618

Start: 2218310

End: 2219269

Strand: Reverse

Name: rocF [H]

Synonym: Pcryo_1794

Alternate gene names: 93006618

Gene position: 2219269-2218310 (Counterclockwise)

Preceding gene: 93006619

Following gene: 93006617

Centisome position: 72.53

GC content: 35.62

Gene sequence:

>960_bases
ATGACTGATATGATGAAAAATATAAGAATAGTAGAAGTTTATTCAGATATCGCAGGATATAAAAAAGGCGCCTCTCTAGG
CATTGATGCATTAAAAGCATCATCGAAAGAGCTTAATGCAGATTATTTTGAAAAATTGCAATTCGACAGTATTGAGGATG
ATAGTAATAACGAAGGAGAATCACAATTTGCGCATGCAAAATATGCTGATGTGATTGAACCGATTATCTCTAAATTAGCA
CATAAAATAAAAGATATAAGAAATGAGAATAAATTCCCAATTGTCTTAGCTGGAGATCATTCTAGCTGCGCAGGAACAAT
GCATGGCCTAAAAATGGCGCATCCTGATGCTGAAATTGGTGTGGTCTATATAGACGCACATGCTGACTTTCATTCACCAT
ACACCAGTGGATCAGGGAACATGCATGGCATGCCTTTGGCGATGGCTTGTGCGATCGATAATTTGGAATGTCAGCGTAAC
GAACTCTCTGAAAAAGAAACAGAGTATTGGGAAAAATTAAAATTTATGGCATCAAGCGAACCATCAATCAAGCCAGAAAA
TGTGGTCTTTTGTGCCGTTAGAGATTATCAAGAAGAAGAAATGGATTTAATTAGAAGGCATAAAATTCCTTTATATAGCG
TTGCTGAGATAACTCAGAAAGGAATCAGTTCCACAGTAGAGGAAATCTTCAAAAAATTGGAATATTGTGATCATATCTAT
GTCTCATTTGATGTTGATAGTGTTGATCCTTTATATGTGCCAGGAACCGGTACGCCTGCAATGAATGGTCTGTCGTATGA
ACAGGCAATGCAACTTAACATAGAGTTAATCAAGAATAAGAAAGTATGCTGTTGGGAGATGGCAGAAATCAATCCTTTAT
ATAATAATTCAAAAGATGACTCTACCAGAATATTTAAGATTTTAGAAAAAGTGACACAGTCTCTTTTAAATAACTATTAG

Upstream 100 bases:

>100_bases
TTTTTTTAAATATATCTACTAATTTTCAAGAGCTTTAATATATAAAAACGAATTTAATTTAACTGCTGTAAAAATTATTT
TATTTAATAGAGACAAAATC

Downstream 100 bases:

>100_bases
TATAAATTATTTAAAATGAGTTAAAGAATCTAGCATAAAAAAATATATTTATGCTAGTTAAAAAATGGACTGCGAGTAAA
AATAATATGGACATTATTAA

Product: arginase/agmatinase/formiminoglutamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTDMMKNIRIVEVYSDIAGYKKGASLGIDALKASSKELNADYFEKLQFDSIEDDSNNEGESQFAHAKYADVIEPIISKLA
HKIKDIRNENKFPIVLAGDHSSCAGTMHGLKMAHPDAEIGVVYIDAHADFHSPYTSGSGNMHGMPLAMACAIDNLECQRN
ELSEKETEYWEKLKFMASSEPSIKPENVVFCAVRDYQEEEMDLIRRHKIPLYSVAEITQKGISSTVEEIFKKLEYCDHIY
VSFDVDSVDPLYVPGTGTPAMNGLSYEQAMQLNIELIKNKKVCCWEMAEINPLYNNSKDDSTRIFKILEKVTQSLLNNY

Sequences:

>Translated_319_residues
MTDMMKNIRIVEVYSDIAGYKKGASLGIDALKASSKELNADYFEKLQFDSIEDDSNNEGESQFAHAKYADVIEPIISKLA
HKIKDIRNENKFPIVLAGDHSSCAGTMHGLKMAHPDAEIGVVYIDAHADFHSPYTSGSGNMHGMPLAMACAIDNLECQRN
ELSEKETEYWEKLKFMASSEPSIKPENVVFCAVRDYQEEEMDLIRRHKIPLYSVAEITQKGISSTVEEIFKKLEYCDHIY
VSFDVDSVDPLYVPGTGTPAMNGLSYEQAMQLNIELIKNKKVCCWEMAEINPLYNNSKDDSTRIFKILEKVTQSLLNNY
>Mature_318_residues
TDMMKNIRIVEVYSDIAGYKKGASLGIDALKASSKELNADYFEKLQFDSIEDDSNNEGESQFAHAKYADVIEPIISKLAH
KIKDIRNENKFPIVLAGDHSSCAGTMHGLKMAHPDAEIGVVYIDAHADFHSPYTSGSGNMHGMPLAMACAIDNLECQRNE
LSEKETEYWEKLKFMASSEPSIKPENVVFCAVRDYQEEEMDLIRRHKIPLYSVAEITQKGISSTVEEIFKKLEYCDHIYV
SFDVDSVDPLYVPGTGTPAMNGLSYEQAMQLNIELIKNKKVCCWEMAEINPLYNNSKDDSTRIFKILEKVTQSLLNNY

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family [H]

Homologues:

Organism=Homo sapiens, GI10947139, Length=283, Percent_Identity=27.208480565371, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI4502215, Length=210, Percent_Identity=30.4761904761905, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71996843, Length=306, Percent_Identity=25.4901960784314, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6325146, Length=262, Percent_Identity=29.0076335877863, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24638886, Length=299, Percent_Identity=26.4214046822742, Blast_Score=98, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014033
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.1 [H]

Molecular weight: Translated: 36009; Mature: 35878

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMMKNIRIVEVYSDIAGYKKGASLGIDALKASSKELNADYFEKLQFDSIEDDSNNEGE
CCCHHHCCEEEEEHHHHHHCCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCCCCCCH
SQFAHAKYADVIEPIISKLAHKIKDIRNENKFPIVLAGDHSSCAGTMHGLKMAHPDAEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCEECCCCCCEE
VVYIDAHADFHSPYTSGSGNMHGMPLAMACAIDNLECQRNELSEKETEYWEKLKFMASSE
EEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSIKPENVVFCAVRDYQEEEMDLIRRHKIPLYSVAEITQKGISSTVEEIFKKLEYCDHIY
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
VSFDVDSVDPLYVPGTGTPAMNGLSYEQAMQLNIELIKNKKVCCWEMAEINPLYNNSKDD
EEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEHHHCCCCCCCCCCH
STRIFKILEKVTQSLLNNY
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDMMKNIRIVEVYSDIAGYKKGASLGIDALKASSKELNADYFEKLQFDSIEDDSNNEGE
CCHHHCCEEEEEHHHHHHCCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCCCCCCH
SQFAHAKYADVIEPIISKLAHKIKDIRNENKFPIVLAGDHSSCAGTMHGLKMAHPDAEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCEECCCCCCEE
VVYIDAHADFHSPYTSGSGNMHGMPLAMACAIDNLECQRNELSEKETEYWEKLKFMASSE
EEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSIKPENVVFCAVRDYQEEEMDLIRRHKIPLYSVAEITQKGISSTVEEIFKKLEYCDHIY
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
VSFDVDSVDPLYVPGTGTPAMNGLSYEQAMQLNIELIKNKKVCCWEMAEINPLYNNSKDD
EEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEHHHCCCCCCCCCCH
STRIFKILEKVTQSLLNNY
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9339546 [H]