Click here to switch to the map view.

The map label for this gene is alpA [C]

Identifier: 93006442

GI number: 93006442

Start: 1990596

End: 1990847

Strand: Reverse

Name: alpA [C]

Synonym: Pcryo_1618

Alternate gene names: 93006442

Gene position: 1990847-1990596 (Counterclockwise)

Preceding gene: 93006443

Following gene: 93006437

Centisome position: 65.06

GC content: 40.08

Gene sequence:

>252_bases
ATGGAAAACTTAAATATAGCACAACCATTTATTGAGCAATGCAACCATATTCCTCAGCTACTTAGCCTCAAAGCCGTTAA
AGAATATACAGGTATCAGCCGCTCGACTATCTATGCAATGGCCGATGTAAATTCTGCTCAATATGATCCAACGTTCCCTA
AAAAGGTGCAACTGACACAAGTGAGGGTAGCTTGGGTAGCAAGTGAGATTGCAGAGTGGATTAATGAAAAAATTGAAGCA
AGATCAGCTTAG

Upstream 100 bases:

>100_bases
ATAAGGGAAGCGTTAGGACAGCATAGGACGCCGTAAATAAATATGGGACTCCGTAACTGTATGAGAACAGACGCTCTCAT
TCACTCACAAGGAGATAATC

Downstream 100 bases:

>100_bases
TTATTAAGTGAACCGTCTTACTTAAAAGTGAGACGGTTATTTTTTTTGTTTAATGCCTAATAATGAGCGTAACGTTACGA
CTGTGGCATGATTGGTCCCA

Product: phage transcriptional regulator AlpA

Products: NA

Alternate protein names: Prophage Regulatory Protein AlpA; Phage Transcriptional Regulator

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MENLNIAQPFIEQCNHIPQLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKVQLTQVRVAWVASEIAEWINEKIEA
RSA

Sequences:

>Translated_83_residues
MENLNIAQPFIEQCNHIPQLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKVQLTQVRVAWVASEIAEWINEKIEA
RSA
>Mature_83_residues
MENLNIAQPFIEQCNHIPQLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKVQLTQVRVAWVASEIAEWINEKIEA
RSA

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9409; Mature: 9409

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLNIAQPFIEQCNHIPQLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKVQLTQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCCHHHH
VRVAWVASEIAEWINEKIEARSA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENLNIAQPFIEQCNHIPQLLSLKAVKEYTGISRSTIYAMADVNSAQYDPTFPKKVQLTQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCCHHHH
VRVAWVASEIAEWINEKIEARSA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA