| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006356
Identifier: 93006356
GI number: 93006356
Start: 1880788
End: 1881471
Strand: Reverse
Name: 93006356
Synonym: Pcryo_1530
Alternate gene names: NA
Gene position: 1881471-1880788 (Counterclockwise)
Preceding gene: 93006357
Following gene: 93006355
Centisome position: 61.49
GC content: 44.74
Gene sequence:
>684_bases ATGTCAAAACTCTCATCATCAATGACACATCATCATACCCAAGCTGGCTTTACACTGGTTGAAATCGTCGTCGTCGTGGT TATTTTGTCTATATTCGCTGGCATGATGAGCTTATCAGTAGGTAGTAGTGAATCGCGTAAAAATCGTGCTTTTTATGAGC ATCTGACGGATTCATTGAGTTATGTTAGGCTGTTATCGGCTGAACGTATGCAGCCGATGGGTTTGAGTCTGCAAGCCAAT AAGCAAGGTCAAATTACCCCTGTGATTGTCACTCTATCTAATCCTTATGTGGCTTATCAAACTGATACCTCGGCGTCTTC TAGTGGAGACAGTACGCCTAAGAATTCAATGGAGCTATCTGCTGATTTATCCAATATGTCTAGTGGGATTAAAGACAAGC TACCAACACCAAGCTGGGGGCTTGAGTCCGAAGTCACTTTACCTGAGCTGCCTGCTGGGGTGAGCTTAGCCATACAAAGC CTAGATGCTGGTAATATGTCAAATAGAGGACAAATCCAAGCACTGCAACCTTGGTTTACAGATCAAACAGTGCCGCAAGT ATTATGGTTTGGTACAGGGCAAGCAGCACCGGTGACTATTGAAGTACGCCATAATTCGCGTCTGGTAGGTGAGGTCATTA CGATTATGCCCGATGGCAGTGTGTCGATAGGTCAAGGGCAATAA
Upstream 100 bases:
>100_bases TTAACCTTTACTTGATACAATCAATCCTCTCTCCCGTTTTATATCTCACCCAATATAACGTCATTTTTAATGGAATGACG CCATTCAAGATGACTTTTGT
Downstream 100 bases:
>100_bases CCGATGATAAATAATGACAGAGCCAAACCTAACCATGTAAACCGAAAGCCAAAACTACCAAAGCATGAGAGCGGATTTAC CTTGATTGAGGTGATGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSKLSSSMTHHHTQAGFTLVEIVVVVVILSIFAGMMSLSVGSSESRKNRAFYEHLTDSLSYVRLLSAERMQPMGLSLQAN KQGQITPVIVTLSNPYVAYQTDTSASSSGDSTPKNSMELSADLSNMSSGIKDKLPTPSWGLESEVTLPELPAGVSLAIQS LDAGNMSNRGQIQALQPWFTDQTVPQVLWFGTGQAAPVTIEVRHNSRLVGEVITIMPDGSVSIGQGQ
Sequences:
>Translated_227_residues MSKLSSSMTHHHTQAGFTLVEIVVVVVILSIFAGMMSLSVGSSESRKNRAFYEHLTDSLSYVRLLSAERMQPMGLSLQAN KQGQITPVIVTLSNPYVAYQTDTSASSSGDSTPKNSMELSADLSNMSSGIKDKLPTPSWGLESEVTLPELPAGVSLAIQS LDAGNMSNRGQIQALQPWFTDQTVPQVLWFGTGQAAPVTIEVRHNSRLVGEVITIMPDGSVSIGQGQ >Mature_226_residues SKLSSSMTHHHTQAGFTLVEIVVVVVILSIFAGMMSLSVGSSESRKNRAFYEHLTDSLSYVRLLSAERMQPMGLSLQANK QGQITPVIVTLSNPYVAYQTDTSASSSGDSTPKNSMELSADLSNMSSGIKDKLPTPSWGLESEVTLPELPAGVSLAIQSL DAGNMSNRGQIQALQPWFTDQTVPQVLWFGTGQAAPVTIEVRHNSRLVGEVITIMPDGSVSIGQGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24324; Mature: 24193
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSSSMTHHHTQAGFTLVEIVVVVVILSIFAGMMSLSVGSSESRKNRAFYEHLTDSLS CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YVRLLSAERMQPMGLSLQANKQGQITPVIVTLSNPYVAYQTDTSASSSGDSTPKNSMELS HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEH ADLSNMSSGIKDKLPTPSWGLESEVTLPELPAGVSLAIQSLDAGNMSNRGQIQALQPWFT HHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC DQTVPQVLWFGTGQAAPVTIEVRHNSRLVGEVITIMPDGSVSIGQGQ CCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCEECCCCC >Mature Secondary Structure SKLSSSMTHHHTQAGFTLVEIVVVVVILSIFAGMMSLSVGSSESRKNRAFYEHLTDSLS CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YVRLLSAERMQPMGLSLQANKQGQITPVIVTLSNPYVAYQTDTSASSSGDSTPKNSMELS HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEH ADLSNMSSGIKDKLPTPSWGLESEVTLPELPAGVSLAIQSLDAGNMSNRGQIQALQPWFT HHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC DQTVPQVLWFGTGQAAPVTIEVRHNSRLVGEVITIMPDGSVSIGQGQ CCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA