| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is prpE [H]
Identifier: 93006344
GI number: 93006344
Start: 1866163
End: 1868208
Strand: Reverse
Name: prpE [H]
Synonym: Pcryo_1518
Alternate gene names: 93006344
Gene position: 1868208-1866163 (Counterclockwise)
Preceding gene: 93006345
Following gene: 93006343
Centisome position: 61.06
GC content: 46.87
Gene sequence:
>2046_bases ATGAGCGCGCAAACCGCCACTGCAGTGACCAATCAAATGTCAGCCCCAACATTTCAAGCACTAAATACGACTCAAACCTT TGCTGAGATTTATCAGTCTTCTATTGAAAATAAAGAAGAGTTTTGGGCTGAGCAAGCCAAGCGTATCTATTGGCATAAAG AGCCTGAGCAAATCCTTGATGACAGTAATTTGCCATTTGCGCAGTGGTTTGTTGGCGGCGAGACCAATCTTTGCTATAAC TGTGTCGATCGTCACCTTGAAGAACGTGCAGAACAGGATGCCTTTATTTGGCTGTCATCAGAGATTAATCAAGAACTCGT AGAAACCTATCCTGCTGTAGTCGATGCTTTTAAAGACTTGGGTAATAACGTTGAGTTCTATACCGACTACACCAAGCGCC GCCTGACTTATAACGACCTTTATAAAGAAGTGAATTATTTTGCCGATGTATTAAAGCGTTACGGTATTGAGAAGGGCGAT CGTGTCATCATTTATATGCCGATGATTTTAGAGGCCGCTTATGCAATGCTCGCCTGTGCGCGTATCGGTGCAGTGCATTC GGTGGTATTTGGTGGCTTTGCTGCCCATAATTTAGCCATTCGTATGGATGATGCTGAAGCAAAAATGGTCATCACAGTGG ATGCAGGTTTGCGTGGTGGTAAAGTCGTCAACTATAAAAACCTTGTCAATCAAGGTATCGAGCAGGCAACCACTAAGCCT GAGCATGTAGTAGTGGTCAATCGTGGTATTTTGCCGTTTGACGTAAAAGAGCTAGATGTGGATTATGCCACTGAACGCCG TATCAGCTGTGAAGCCAATGCTATCGTCGAGCCTGTATGGCTTGAGTCTAATACGCCATCGTATCTGCTTTATACCTCTG GTACGACGGGCACACCAAAAGGTGTGCAACGTGATACCGGTGGTCATGCAGTAGCACTGACCACATCGATAGACTATATC TACGACGGTAAGGCAGGCGAGACGTTTTGGGCGATATCTGATATCGGTTGGGCCGTTGGGCATTCTTATACCATTTATGC GCCATTGCTTGCTGGCATGACCAGTGTTATGTATGAAGGCTTACCGCATCTACCAAACCCTGGTATCTGGTGGCGTATTG TGGAGGCCAACAAGGTCAATATCTTATTCACCGCACCAACTGGTGTGCGTATGCTGAAAAAGCAAGATGAGACATGGATG ACCCGTTACGATGTCTCAAGCGTCAAATCCTTCTTTTTGGCAGGTGAGCCACTAGATGAGTCTACTGCCAGCTGGCTGAC CAAGCATTTGGGTGTACCGATTTTAGACCATTATTGGCAGACAGAATCAGGTTGGCCTATTCTGAGTAATACTCCTAGGT TCGCTGATAAACCGCACAAACAAGGCTCACCTGGCTATCCTATGTATGGCTACGATGCGCAGGTCATCAATGAAGAAACT GGCGAGCCGTGTAAAGCGGGTGAAAAAGGTTTACTGGCGATTCGTGCGCCCTTACCACCGGGTTGTTTGACCACAGTTTG GGGTAATGATAAGCGCTTTATTGACAGCTACTTTAGCTTAGCGGATAGCAATCAATATTCGACATCGGACTATGCAGTCG TTGACGAGGACGGTTATTTTCATATCCTTGGTCGTACCGATGATGTCATCAACGTCGCCGGTCATAGACTGGGAACCCAA GAGATTGAAGAGGCAATCAGTATGCATGCAGAGGTCGCAGAGTGTGCGGTCGTGGGTATTCAAGATGAACTAAAAGGCGA GCTGCCGATTGCTTTTTGCGTGTTAAAAGATCATGAACTGGTGGCAACCACTGAAAACCGCTTTCGCCTTGAGCAGCAAG TGATCGGTGCGGTGGTGAAATCCTTAGGCGGTATCGCGCGACCTGCTGCGATTTATTTCCCGCAAGCATTACCAAAGACG CGCTCTGGTAAGATATTGCGCCGTGCTATTCGGGCGTTAGCAGAGGATAAACCCACTGGTGATATGTCTACCCTTGATAA TCCAACGGCTATTGATGCGGTCAAGCAATCTATGAAGGATTACTAG
Upstream 100 bases:
>100_bases ATTTAGTAAGGATAGCTGGCCGGGATAGCCAGTCTTATATTATGATATTATCGGACAAATCACATCGCATTACCCATCAT TTATGCTAAGGACAGCTATT
Downstream 100 bases:
>100_bases GCGCATTTTCAGGCACGTTTTAAAACTACCTTTATCTAAAAAAGCTCATGAATGCTCATGGGCTTTTTTATTGTCGTTAA TAGCTTATGGATTATGGTAT
Product: propionyl-CoA synthetase
Products: NA
Alternate protein names: Propionyl-CoA synthetase [H]
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MSAQTATAVTNQMSAPTFQALNTTQTFAEIYQSSIENKEEFWAEQAKRIYWHKEPEQILDDSNLPFAQWFVGGETNLCYN CVDRHLEERAEQDAFIWLSSEINQELVETYPAVVDAFKDLGNNVEFYTDYTKRRLTYNDLYKEVNYFADVLKRYGIEKGD RVIIYMPMILEAAYAMLACARIGAVHSVVFGGFAAHNLAIRMDDAEAKMVITVDAGLRGGKVVNYKNLVNQGIEQATTKP EHVVVVNRGILPFDVKELDVDYATERRISCEANAIVEPVWLESNTPSYLLYTSGTTGTPKGVQRDTGGHAVALTTSIDYI YDGKAGETFWAISDIGWAVGHSYTIYAPLLAGMTSVMYEGLPHLPNPGIWWRIVEANKVNILFTAPTGVRMLKKQDETWM TRYDVSSVKSFFLAGEPLDESTASWLTKHLGVPILDHYWQTESGWPILSNTPRFADKPHKQGSPGYPMYGYDAQVINEET GEPCKAGEKGLLAIRAPLPPGCLTTVWGNDKRFIDSYFSLADSNQYSTSDYAVVDEDGYFHILGRTDDVINVAGHRLGTQ EIEEAISMHAEVAECAVVGIQDELKGELPIAFCVLKDHELVATTENRFRLEQQVIGAVVKSLGGIARPAAIYFPQALPKT RSGKILRRAIRALAEDKPTGDMSTLDNPTAIDAVKQSMKDY
Sequences:
>Translated_681_residues MSAQTATAVTNQMSAPTFQALNTTQTFAEIYQSSIENKEEFWAEQAKRIYWHKEPEQILDDSNLPFAQWFVGGETNLCYN CVDRHLEERAEQDAFIWLSSEINQELVETYPAVVDAFKDLGNNVEFYTDYTKRRLTYNDLYKEVNYFADVLKRYGIEKGD RVIIYMPMILEAAYAMLACARIGAVHSVVFGGFAAHNLAIRMDDAEAKMVITVDAGLRGGKVVNYKNLVNQGIEQATTKP EHVVVVNRGILPFDVKELDVDYATERRISCEANAIVEPVWLESNTPSYLLYTSGTTGTPKGVQRDTGGHAVALTTSIDYI YDGKAGETFWAISDIGWAVGHSYTIYAPLLAGMTSVMYEGLPHLPNPGIWWRIVEANKVNILFTAPTGVRMLKKQDETWM TRYDVSSVKSFFLAGEPLDESTASWLTKHLGVPILDHYWQTESGWPILSNTPRFADKPHKQGSPGYPMYGYDAQVINEET GEPCKAGEKGLLAIRAPLPPGCLTTVWGNDKRFIDSYFSLADSNQYSTSDYAVVDEDGYFHILGRTDDVINVAGHRLGTQ EIEEAISMHAEVAECAVVGIQDELKGELPIAFCVLKDHELVATTENRFRLEQQVIGAVVKSLGGIARPAAIYFPQALPKT RSGKILRRAIRALAEDKPTGDMSTLDNPTAIDAVKQSMKDY >Mature_680_residues SAQTATAVTNQMSAPTFQALNTTQTFAEIYQSSIENKEEFWAEQAKRIYWHKEPEQILDDSNLPFAQWFVGGETNLCYNC VDRHLEERAEQDAFIWLSSEINQELVETYPAVVDAFKDLGNNVEFYTDYTKRRLTYNDLYKEVNYFADVLKRYGIEKGDR VIIYMPMILEAAYAMLACARIGAVHSVVFGGFAAHNLAIRMDDAEAKMVITVDAGLRGGKVVNYKNLVNQGIEQATTKPE HVVVVNRGILPFDVKELDVDYATERRISCEANAIVEPVWLESNTPSYLLYTSGTTGTPKGVQRDTGGHAVALTTSIDYIY DGKAGETFWAISDIGWAVGHSYTIYAPLLAGMTSVMYEGLPHLPNPGIWWRIVEANKVNILFTAPTGVRMLKKQDETWMT RYDVSSVKSFFLAGEPLDESTASWLTKHLGVPILDHYWQTESGWPILSNTPRFADKPHKQGSPGYPMYGYDAQVINEETG EPCKAGEKGLLAIRAPLPPGCLTTVWGNDKRFIDSYFSLADSNQYSTSDYAVVDEDGYFHILGRTDDVINVAGHRLGTQE IEEAISMHAEVAECAVVGIQDELKGELPIAFCVLKDHELVATTENRFRLEQQVIGAVVKSLGGIARPAAIYFPQALPKTR SGKILRRAIRALAEDKPTGDMSTLDNPTAIDAVKQSMKDY
Specific function: Catalyzes the synthesis of propionyl-CoA from propionate and CoA. Also converts acetate to acetyl-CoA but with a lower specific activity [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI13375727, Length=658, Percent_Identity=38.2978723404255, Blast_Score=451, Evalue=1e-127, Organism=Homo sapiens, GI8923896, Length=686, Percent_Identity=35.7142857142857, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI253970489, Length=702, Percent_Identity=35.042735042735, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI28416953, Length=650, Percent_Identity=35.5384615384615, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI122937307, Length=511, Percent_Identity=28.9628180039139, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI38505220, Length=526, Percent_Identity=27.3764258555133, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI42544132, Length=527, Percent_Identity=27.3244781783681, Blast_Score=160, Evalue=5e-39, Organism=Homo sapiens, GI58082049, Length=543, Percent_Identity=25.9668508287293, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI115511026, Length=532, Percent_Identity=26.3157894736842, Blast_Score=146, Evalue=8e-35, Organism=Homo sapiens, GI157311624, Length=554, Percent_Identity=25.0902527075812, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI157311622, Length=554, Percent_Identity=25.0902527075812, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI31982927, Length=669, Percent_Identity=23.3183856502242, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI195947378, Length=412, Percent_Identity=24.2718446601942, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI156151445, Length=549, Percent_Identity=24.408014571949, Blast_Score=81, Evalue=4e-15, Organism=Escherichia coli, GI1786529, Length=656, Percent_Identity=50.3048780487805, Blast_Score=678, Evalue=0.0, Organism=Escherichia coli, GI1790505, Length=672, Percent_Identity=36.7559523809524, Blast_Score=421, Evalue=1e-118, Organism=Escherichia coli, GI1788107, Length=598, Percent_Identity=25.4180602006689, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI145693145, Length=547, Percent_Identity=24.1316270566728, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786810, Length=535, Percent_Identity=23.7383177570093, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI221142682, Length=535, Percent_Identity=23.1775700934579, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1789201, Length=544, Percent_Identity=22.2426470588235, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71982997, Length=671, Percent_Identity=33.6810730253353, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI71983001, Length=671, Percent_Identity=33.6810730253353, Blast_Score=356, Evalue=3e-98, Organism=Caenorhabditis elegans, GI17569507, Length=681, Percent_Identity=21.43906020558, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71985884, Length=579, Percent_Identity=23.3160621761658, Blast_Score=117, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17538037, Length=552, Percent_Identity=24.2753623188406, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17531443, Length=545, Percent_Identity=24.5871559633028, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17557194, Length=547, Percent_Identity=24.8628884826325, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17558820, Length=538, Percent_Identity=23.2342007434944, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32563687, Length=530, Percent_Identity=22.8301886792453, Blast_Score=96, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17559526, Length=567, Percent_Identity=23.9858906525573, Blast_Score=93, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71996755, Length=528, Percent_Identity=21.5909090909091, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17560308, Length=613, Percent_Identity=23.0016313213703, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560140, Length=536, Percent_Identity=22.0149253731343, Blast_Score=77, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319264, Length=679, Percent_Identity=36.5243004418262, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6323182, Length=682, Percent_Identity=35.4838709677419, Blast_Score=402, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6319699, Length=565, Percent_Identity=22.6548672566372, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355225, Length=672, Percent_Identity=36.0119047619048, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI24667955, Length=679, Percent_Identity=35.640648011782, Blast_Score=395, Evalue=1e-110, Organism=Drosophila melanogaster, GI62472339, Length=563, Percent_Identity=38.1882770870337, Blast_Score=361, Evalue=1e-99, Organism=Drosophila melanogaster, GI24667959, Length=517, Percent_Identity=37.137330754352, Blast_Score=322, Evalue=5e-88, Organism=Drosophila melanogaster, GI21355181, Length=588, Percent_Identity=24.8299319727891, Blast_Score=119, Evalue=1e-26, Organism=Drosophila melanogaster, GI18859661, Length=536, Percent_Identity=22.5746268656716, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356441, Length=390, Percent_Identity=25.1282051282051, Blast_Score=68, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR012694 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.17 [H]
Molecular weight: Translated: 75915; Mature: 75784
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQTATAVTNQMSAPTFQALNTTQTFAEIYQSSIENKEEFWAEQAKRIYWHKEPEQILD CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHC DSNLPFAQWFVGGETNLCYNCVDRHLEERAEQDAFIWLSSEINQELVETYPAVVDAFKDL CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH GNNVEFYTDYTKRRLTYNDLYKEVNYFADVLKRYGIEKGDRVIIYMPMILEAAYAMLACA CCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHH RIGAVHSVVFGGFAAHNLAIRMDDAEAKMVITVDAGLRGGKVVNYKNLVNQGIEQATTKP HHHHHHHHHHCCHHHCEEEEEEECCCCEEEEEEECCCCCCEEECHHHHHHHHHHHHCCCC EHVVVVNRGILPFDVKELDVDYATERRISCEANAIVEPVWLESNTPSYLLYTSGTTGTPK CEEEEEECCCCCCCHHHCCCCHHHCCCCCCCCCCEECEEEECCCCCCEEEEECCCCCCCC GVQRDTGGHAVALTTSIDYIYDGKAGETFWAISDIGWAVGHSYTIYAPLLAGMTSVMYEG CCCCCCCCCEEEEEEEEEEEECCCCCCEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHCC LPHLPNPGIWWRIVEANKVNILFTAPTGVRMLKKQDETWMTRYDVSSVKSFFLAGEPLDE CCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH STASWLTKHLGVPILDHYWQTESGWPILSNTPRFADKPHKQGSPGYPMYGYDAQVINEET HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCC GEPCKAGEKGLLAIRAPLPPGCLTTVWGNDKRFIDSYFSLADSNQYSTSDYAVVDEDGYF CCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEE HILGRTDDVINVAGHRLGTQEIEEAISMHAEVAECAVVGIQDELKGELPIAFCVLKDHEL EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCEEEEEEECCEE VATTENRFRLEQQVIGAVVKSLGGIARPAAIYFPQALPKTRSGKILRRAIRALAEDKPTG EEECCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCC DMSTLDNPTAIDAVKQSMKDY CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SAQTATAVTNQMSAPTFQALNTTQTFAEIYQSSIENKEEFWAEQAKRIYWHKEPEQILD CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHC DSNLPFAQWFVGGETNLCYNCVDRHLEERAEQDAFIWLSSEINQELVETYPAVVDAFKDL CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH GNNVEFYTDYTKRRLTYNDLYKEVNYFADVLKRYGIEKGDRVIIYMPMILEAAYAMLACA CCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHH RIGAVHSVVFGGFAAHNLAIRMDDAEAKMVITVDAGLRGGKVVNYKNLVNQGIEQATTKP HHHHHHHHHHCCHHHCEEEEEEECCCCEEEEEEECCCCCCEEECHHHHHHHHHHHHCCCC EHVVVVNRGILPFDVKELDVDYATERRISCEANAIVEPVWLESNTPSYLLYTSGTTGTPK CEEEEEECCCCCCCHHHCCCCHHHCCCCCCCCCCEECEEEECCCCCCEEEEECCCCCCCC GVQRDTGGHAVALTTSIDYIYDGKAGETFWAISDIGWAVGHSYTIYAPLLAGMTSVMYEG CCCCCCCCCEEEEEEEEEEEECCCCCCEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHCC LPHLPNPGIWWRIVEANKVNILFTAPTGVRMLKKQDETWMTRYDVSSVKSFFLAGEPLDE CCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH STASWLTKHLGVPILDHYWQTESGWPILSNTPRFADKPHKQGSPGYPMYGYDAQVINEET HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCC GEPCKAGEKGLLAIRAPLPPGCLTTVWGNDKRFIDSYFSLADSNQYSTSDYAVVDEDGYF CCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEE HILGRTDDVINVAGHRLGTQEIEEAISMHAEVAECAVVGIQDELKGELPIAFCVLKDHEL EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCEEEEEEECCEE VATTENRFRLEQQVIGAVVKSLGGIARPAAIYFPQALPKTRSGKILRRAIRALAEDKPTG EEECCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCC DMSTLDNPTAIDAVKQSMKDY CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9006051; 10411265; 11677609; 10482501 [H]