| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006329
Identifier: 93006329
GI number: 93006329
Start: 1847178
End: 1847843
Strand: Direct
Name: 93006329
Synonym: Pcryo_1503
Alternate gene names: NA
Gene position: 1847178-1847843 (Clockwise)
Preceding gene: 93006312
Following gene: 93006333
Centisome position: 60.37
GC content: 42.79
Gene sequence:
>666_bases ATGTCTCTCTCAACCGATTATTCCACCTCAAAAAGCCATGCCAATTTATCGTCACTTGATCCAAAAAACATAAGTTTAGA GTATCTCGATTCAGAGGCGCGTGCCGTATTGGATTTTTGGTTTGATAAGGACAATGAACAGTATTGGTTTGAACAAAGCC ATGAATTTGATCAGAAAATAAAAGAGCGGTTTGGTGAAATTTGGCAAGCAGCAAAGCAAGGGGAATGCGTCACTTGGCGC ATTTCAGAAGCAGCAACCGACTGCAACAGCTCCATTACCGCTTTGGCTGGGCGTCTGGCAGAGATCATCGTTTTAGATCA ATTTTCACGCAATTTATGCCGCAATAAAGCGGAAGCCTTTGCGCAAGATGGTATGGCGCTGGTGTTGGCTCAAGAAGTCA TATTGCAGCCACATTTTTCTACCTTACCAATAACATGGCGCAAATTTGCTATTATGCCGTTTATGCATTCAGAATCTTTA AGGATTCATAGTCGCTATCTGCCATTGTTTGAAAAGCTCGATGATGCCATTACGTTAGATTTTGAGCAGCAGCACAAAGA GATTATCGAGCAGTTTGGGCGTTACCCACATCGCAATAACACGTTAGATCGTGAGTCAACGGATGAAGAAGAAGCCTTTT TGCATCAGTGGAACTCGTCGTTTTGA
Upstream 100 bases:
>100_bases TTTGTATTCATAAGGTTTACCTAATAGCTGCTGCTCGTATCATGACAGACATAAATATTTGCGCTATAGTAGACTAAATC TATCATAATTAGAATAGCTT
Downstream 100 bases:
>100_bases CGTGATAACGCTTTCATAGTGGATTGACCATTATATAAAACAAGGGCTGAATCAGATAACTGATTCAGCCCTTGTTTTAT AACTTGTTCTATAATAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSLSTDYSTSKSHANLSSLDPKNISLEYLDSEARAVLDFWFDKDNEQYWFEQSHEFDQKIKERFGEIWQAAKQGECVTWR ISEAATDCNSSITALAGRLAEIIVLDQFSRNLCRNKAEAFAQDGMALVLAQEVILQPHFSTLPITWRKFAIMPFMHSESL RIHSRYLPLFEKLDDAITLDFEQQHKEIIEQFGRYPHRNNTLDRESTDEEEAFLHQWNSSF
Sequences:
>Translated_221_residues MSLSTDYSTSKSHANLSSLDPKNISLEYLDSEARAVLDFWFDKDNEQYWFEQSHEFDQKIKERFGEIWQAAKQGECVTWR ISEAATDCNSSITALAGRLAEIIVLDQFSRNLCRNKAEAFAQDGMALVLAQEVILQPHFSTLPITWRKFAIMPFMHSESL RIHSRYLPLFEKLDDAITLDFEQQHKEIIEQFGRYPHRNNTLDRESTDEEEAFLHQWNSSF >Mature_220_residues SLSTDYSTSKSHANLSSLDPKNISLEYLDSEARAVLDFWFDKDNEQYWFEQSHEFDQKIKERFGEIWQAAKQGECVTWRI SEAATDCNSSITALAGRLAEIIVLDQFSRNLCRNKAEAFAQDGMALVLAQEVILQPHFSTLPITWRKFAIMPFMHSESLR IHSRYLPLFEKLDDAITLDFEQQHKEIIEQFGRYPHRNNTLDRESTDEEEAFLHQWNSSF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25820; Mature: 25689
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSTDYSTSKSHANLSSLDPKNISLEYLDSEARAVLDFWFDKDNEQYWFEQSHEFDQKI CCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH KERFGEIWQAAKQGECVTWRISEAATDCNSSITALAGRLAEIIVLDQFSRNLCRNKAEAF HHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQDGMALVLAQEVILQPHFSTLPITWRKFAIMPFMHSESLRIHSRYLPLFEKLDDAITLD HHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEECC FEQQHKEIIEQFGRYPHRNNTLDRESTDEEEAFLHQWNSSF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SLSTDYSTSKSHANLSSLDPKNISLEYLDSEARAVLDFWFDKDNEQYWFEQSHEFDQKI CCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH KERFGEIWQAAKQGECVTWRISEAATDCNSSITALAGRLAEIIVLDQFSRNLCRNKAEAF HHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQDGMALVLAQEVILQPHFSTLPITWRKFAIMPFMHSESLRIHSRYLPLFEKLDDAITLD HHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEECC FEQQHKEIIEQFGRYPHRNNTLDRESTDEEEAFLHQWNSSF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA