BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is rhlB [H]

Identifier: 93006300

GI number: 93006300

Start: 1813967

End: 1815121

Strand: Reverse

Name: rhlB [H]

Synonym: Pcryo_1474

Alternate gene names: 93006300

Gene position: 1815121-1813967 (Counterclockwise)

Preceding gene: 93006301

Following gene: 93006292

Centisome position: 59.32

GC content: 44.5

Gene sequence:

>1155_bases
TTGAGTAACTTTACGACGTTTACGGATTTGCCACTTTCAGCAGCGACCTTGCGTGCAGTAAGTGACTTAGGTTTTACTGA
ATTGACGCCGATTCAAGCAAAAATACTGCCGCATACGCTGGCAAACCAAGATGCGATCGGACAGGCGCAGACGGGTACGG
GCAAGACGGCTACATTTTTATTGACCATTATGGAGGCGTTACTTAAGCGTCCGTTTGCTGCTGATGAAGAACGTCATTTA
GGTGAGCCACGTGCTGTCGTTATGGCACCTACCCGTGAGCTTGCTCAGCAAATATTCGATGATTGTATCGCTTTGACCAA
ATATACTTCTTTGCATAGCGTCTGTATTATGGGTGGTACCAATTATGAAACCCAGCAGCATGAGCTTGAGCGTCAATACG
TCGATATCTTGATTGCCACACCTGGTCGTTTGATTGATTTAATGCACAAAGGTATGGTTTATCTTGATCGCGTAGAAGTA
TTAGTATTAGATGAAGCAGACCGCATGCTCGATATGGGGTTTATACCTGATATCAAACGCTTAGTCGGTCGCATGCCACC
CAATACCGACCGTCAAAGTTTATTGTTTTCTGCTACCTTTAACCAAGATGTGATGGGTTTGGCTTATCGCTGGTTACATG
AGCCAGAGTTTGTCGAAATTGAGCCTGAGCATAAAACCAGTGAGCTGGTAGACCAACATTTTTATCTCTTAACCGAAGAT
CAGAAGCTAGAAGCGGTTGAGCGTATTATCACGGATAGTACGGTAGAGAAAGTGATTATTTTTGCCAATCGTAAAGACCA
AGTAAAGCGCCTATATCATAAGCTGCGTCAGGGACATAAAATTGTCATGTTATCAGGCGATGTGATTCAGCAAAAACGCG
AGAAATATCTACAGCGCTTTAAAGACGGGCATGCCTCTGTTTTGGTCGCGACCGATGTAGCAGGGCGCGGTATTCATGTT
GATGATGTCAGTCATGTGATTAATTATACCTTACCAGACCAGCCAGATGACTATGTACACCGTATCGGTCGTACTGGGCG
CGCTGGGCAAACCGGTATTAGTATTAGCTTTGTCAGCGAAGATGATGCCTTTAATATACCAGCATTAGAGAAGCATTTGG
ATACGAAGTTTAAGCTTGAGCAGTGGCAGCCTTAA

Upstream 100 bases:

>100_bases
TGGGGCTTGCCTGCTGACTAATCGTTGCTATAAACCGTTAAGCCTTATAGCCTCTCATTTATTTATGATACACAAGCGAT
TTATATAAAAGGATATTTTT

Downstream 100 bases:

>100_bases
TCAGATTTTTTTAATTAAGCTCTAAAGTCTTTAGACAGTAAAAAGCCCTTGATAAATCATTAAGGGCTTTTTTTATGCAT
GTAATATTGGTTATAACATT

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSNFTTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIMEALLKRPFAADEERHL
GEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYETQQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEV
LVLDEADRMLDMGFIPDIKRLVGRMPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTED
QKLEAVERIITDSTVEKVIIFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRFKDGHASVLVATDVAGRGIHV
DDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDDAFNIPALEKHLDTKFKLEQWQP

Sequences:

>Translated_384_residues
MSNFTTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIMEALLKRPFAADEERHL
GEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYETQQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEV
LVLDEADRMLDMGFIPDIKRLVGRMPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTED
QKLEAVERIITDSTVEKVIIFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRFKDGHASVLVATDVAGRGIHV
DDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDDAFNIPALEKHLDTKFKLEQWQP
>Mature_383_residues
SNFTTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFLLTIMEALLKRPFAADEERHLG
EPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGTNYETQQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEVL
VLDEADRMLDMGFIPDIKRLVGRMPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTEDQ
KLEAVERIITDSTVEKVIIFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRFKDGHASVLVATDVAGRGIHVD
DVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSEDDAFNIPALEKHLDTKFKLEQWQP

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=38.3812010443864, Blast_Score=252, Evalue=3e-67,
Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=40.974212034384, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI262118318, Length=386, Percent_Identity=37.8238341968912, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI262231852, Length=386, Percent_Identity=37.8238341968912, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI13518015, Length=386, Percent_Identity=37.8238341968912, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI216548263, Length=386, Percent_Identity=37.8238341968912, Blast_Score=235, Evalue=4e-62,
Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=39.3939393939394, Blast_Score=235, Evalue=4e-62,
Organism=Homo sapiens, GI148613856, Length=344, Percent_Identity=40.6976744186046, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI38201710, Length=344, Percent_Identity=40.6976744186046, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=36.3881401617251, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=36.3881401617251, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=36.3881401617251, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=36.1930294906166, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=36.1930294906166, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=37.431693989071, Blast_Score=221, Evalue=6e-58,
Organism=Homo sapiens, GI224593278, Length=362, Percent_Identity=37.8453038674033, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=32.8, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI164664518, Length=375, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI21071032, Length=370, Percent_Identity=36.4864864864865, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI45446747, Length=343, Percent_Identity=37.6093294460641, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI45446743, Length=343, Percent_Identity=37.6093294460641, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI55749865, Length=374, Percent_Identity=35.2941176470588, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=34.6456692913386, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=35.6545961002786, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=34.5844504021448, Blast_Score=194, Evalue=8e-50,
Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=33.4210526315789, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI31542656, Length=385, Percent_Identity=34.025974025974, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=33.7765957446808, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=362, Percent_Identity=32.8729281767956, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=33.5917312661499, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=33.0749354005168, Blast_Score=184, Evalue=9e-47,
Organism=Homo sapiens, GI41327779, Length=394, Percent_Identity=31.4720812182741, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=32.3369565217391, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=32.3369565217391, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=33.2432432432432, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI164419732, Length=392, Percent_Identity=33.1632653061224, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI41327776, Length=358, Percent_Identity=33.7988826815642, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=31.6526610644258, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=33.1395348837209, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI21040371, Length=395, Percent_Identity=29.620253164557, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.0459770114943, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI4758112, Length=393, Percent_Identity=28.7531806615776, Blast_Score=165, Evalue=5e-41,
Organism=Homo sapiens, GI18375623, Length=393, Percent_Identity=28.7531806615776, Blast_Score=165, Evalue=5e-41,
Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=31.2849162011173, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI17505907, Length=402, Percent_Identity=29.1044776119403, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=31.2849162011173, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=28.428927680798, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=32.8358208955224, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=25.6064690026954, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI154759257, Length=401, Percent_Identity=27.930174563591, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=29.4573643410853, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI9966805, Length=393, Percent_Identity=29.5165394402036, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI20336298, Length=272, Percent_Identity=31.25, Blast_Score=112, Evalue=6e-25,
Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=44.5910290237467, Blast_Score=320, Evalue=7e-89,
Organism=Escherichia coli, GI1787016, Length=358, Percent_Identity=43.2960893854749, Blast_Score=288, Evalue=3e-79,
Organism=Escherichia coli, GI87082221, Length=361, Percent_Identity=39.3351800554017, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1787605, Length=387, Percent_Identity=35.9173126614987, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1788930, Length=377, Percent_Identity=37.9310344827586, Blast_Score=219, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=40.5405405405405, Blast_Score=257, Evalue=8e-69,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=40.0544959128065, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=40.0544959128065, Blast_Score=249, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=40.0544959128065, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI71995718, Length=373, Percent_Identity=39.142091152815, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI115533224, Length=361, Percent_Identity=38.5041551246537, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=34.1333333333333, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17552642, Length=375, Percent_Identity=35.2, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17509811, Length=377, Percent_Identity=33.9522546419098, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17537549, Length=367, Percent_Identity=37.6021798365123, Blast_Score=207, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=380, Percent_Identity=31.8421052631579, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507881, Length=397, Percent_Identity=33.5012594458438, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507121, Length=375, Percent_Identity=32, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17555296, Length=374, Percent_Identity=34.2245989304813, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=35.8333333333333, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=34.0482573726542, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=33.9378238341969, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=34.2175066312997, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=30.8310991957105, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=35.0282485875706, Blast_Score=194, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=31.1977715877437, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=375, Percent_Identity=31.7333333333333, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=31.1977715877437, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=34.6590909090909, Blast_Score=177, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI193208216, Length=397, Percent_Identity=33.7531486146096, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17536099, Length=403, Percent_Identity=33.0024813895782, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=412, Percent_Identity=31.3106796116505, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17507641, Length=399, Percent_Identity=31.328320802005, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=403, Percent_Identity=33.0024813895782, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=33.2506203473945, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=30.5912596401028, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI115532548, Length=389, Percent_Identity=30.5912596401028, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=31.4666666666667, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=28.3422459893048, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17553716, Length=371, Percent_Identity=26.4150943396226, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=416, Percent_Identity=26.4423076923077, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI193206561, Length=362, Percent_Identity=25.9668508287293, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17556951, Length=367, Percent_Identity=25.0681198910082, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=29.9093655589124, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=381, Percent_Identity=27.2965879265092, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=221, Percent_Identity=31.6742081447964, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17557982, Length=349, Percent_Identity=27.5071633237822, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI25148205, Length=336, Percent_Identity=25.8928571428571, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17566630, Length=310, Percent_Identity=26.4516129032258, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=41.8367346938776, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565430, Length=374, Percent_Identity=23.5294117647059, Blast_Score=90, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=39.4179894179894, Blast_Score=250, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=38.9041095890411, Blast_Score=237, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=38.4615384615385, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=38.0952380952381, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=32.4468085106383, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=369, Percent_Identity=34.6883468834688, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=381, Percent_Identity=36.4829396325459, Blast_Score=210, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320041, Length=373, Percent_Identity=32.171581769437, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=34.1597796143251, Blast_Score=203, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=367, Percent_Identity=34.6049046321526, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=392, Percent_Identity=32.9081632653061, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6319714, Length=386, Percent_Identity=33.160621761658, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6320173, Length=418, Percent_Identity=31.8181818181818, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=373, Percent_Identity=34.0482573726542, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=32.8, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=32.8, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=33.59375, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6320119, Length=379, Percent_Identity=30.6068601583113, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=403, Percent_Identity=32.5062034739454, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=30.4225352112676, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=440, Percent_Identity=30.4545454545455, Blast_Score=153, Evalue=4e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=369, Percent_Identity=29.2682926829268, Blast_Score=146, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.8765133171913, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322876, Length=403, Percent_Identity=27.0471464019851, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=26.5714285714286, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6321374, Length=378, Percent_Identity=26.7195767195767, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24584994, Length=368, Percent_Identity=39.4021739130435, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI28574962, Length=349, Percent_Identity=42.1203438395415, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=36.7688022284123, Blast_Score=226, Evalue=1e-59,
Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=37.2340425531915, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI18857967, Length=380, Percent_Identity=36.0526315789474, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644479, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI281361218, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644481, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644483, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644487, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI45551833, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644485, Length=375, Percent_Identity=36.2666666666667, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=36.9318181818182, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=38.3522727272727, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI21356161, Length=380, Percent_Identity=36.0526315789474, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24645031, Length=374, Percent_Identity=32.8877005347594, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=33.972602739726, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24583281, Length=375, Percent_Identity=32.2666666666667, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI281365720, Length=304, Percent_Identity=40.7894736842105, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=34.4444444444444, Blast_Score=193, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24583279, Length=375, Percent_Identity=32.2666666666667, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI17977678, Length=382, Percent_Identity=32.7225130890052, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=33.9779005524862, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=33.9779005524862, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=33.9779005524862, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=33.9779005524862, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI17136814, Length=386, Percent_Identity=33.6787564766839, Blast_Score=181, Evalue=7e-46,
Organism=Drosophila melanogaster, GI28575014, Length=380, Percent_Identity=29.7368421052632, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI24642822, Length=401, Percent_Identity=31.1720698254364, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=31.9088319088319, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=31.9088319088319, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24666101, Length=351, Percent_Identity=34.1880341880342, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI21355559, Length=382, Percent_Identity=30.8900523560209, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=30.2197802197802, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=30.2197802197802, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=30.2197802197802, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=28.9592760180996, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI19920478, Length=344, Percent_Identity=31.6860465116279, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24643725, Length=413, Percent_Identity=28.8135593220339, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI17647335, Length=368, Percent_Identity=29.3478260869565, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=31.5151515151515, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI17136666, Length=425, Percent_Identity=28.4705882352941, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=25.5681818181818, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI28571338, Length=232, Percent_Identity=32.3275862068966, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI18859659, Length=232, Percent_Identity=32.3275862068966, Blast_Score=109, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 43578; Mature: 43447

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFTTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFL
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHH
LTIMEALLKRPFAADEERHLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGT
HHHHHHHHHCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NYETQQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKR
CCCHHHHHHHHHHHEEEEECCHHHHHHHHCCCEEEEEEEEEEECCCHHHHHCCCCHHHHH
LVGRMPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTED
HHCCCCCCCCHHHEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHEEEEECC
QKLEAVERIITDSTVEKVIIFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRF
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
KDGHASVLVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSE
CCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECC
DDAFNIPALEKHLDTKFKLEQWQP
CCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SNFTTFTDLPLSAATLRAVSDLGFTELTPIQAKILPHTLANQDAIGQAQTGTGKTATFL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHH
LTIMEALLKRPFAADEERHLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGT
HHHHHHHHHCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NYETQQHELERQYVDILIATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKR
CCCHHHHHHHHHHHEEEEECCHHHHHHHHCCCEEEEEEEEEEECCCHHHHHCCCCHHHHH
LVGRMPPNTDRQSLLFSATFNQDVMGLAYRWLHEPEFVEIEPEHKTSELVDQHFYLLTED
HHCCCCCCCCHHHEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHEEEEECC
QKLEAVERIITDSTVEKVIIFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRF
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
KDGHASVLVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSE
CCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECC
DDAFNIPALEKHLDTKFKLEQWQP
CCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]