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The map label for this gene is ybeQ [H]

Identifier: 93006283

GI number: 93006283

Start: 1797249

End: 1797905

Strand: Direct

Name: ybeQ [H]

Synonym: Pcryo_1457

Alternate gene names: 93006283

Gene position: 1797249-1797905 (Clockwise)

Preceding gene: 93006280

Following gene: 93006285

Centisome position: 58.74

GC content: 36.83

Gene sequence:

>657_bases
ATGATCTTTTCTAAGTCTAAAATGACAACTACCCTTCTTTTTCTTTTATCTTCACCATTTTTGTTGATGGGTTGCCAACA
AATTCAAAGTGCAACTAATCAACAAGCTTTACAGACGCAATTGAAGGTTAAGAAAGAAAGTGATGTTGCAAAGCTACAAA
GACTGGCAGAACAAGGCGATGTAAAATCGCAGTTTAATCTTGCCGAGAGATATAGAGAAGGTATAGAAATAAATATAGAT
TGTGACAAAGCAACCTATTGGTACAATAAAGCAGCTAATGAAGGAGATATAGCGGCTCAGTCCAACTTAGGCGTCATGTA
CAGTCTAGGTTACTGTGTATCTCAAGACTATAATAAAGCAGTATATTGGTACACGAAAGCAGCTGATCAAGGAGACGTAG
CGGCTCAGTTCACTCTAGGTGACTTATACCACAAAGGTTATGGTGTGCCGCAAGATTATAATAAAGCAATTTATTGGTAC
ACAAAAGCAGCTAGTCAAGACTATCCATTTGCTCAATATGCTATAGCCACTATGTACGAAAAAGGTCAGGGCGTACGTCA
AGATTATGCTATTGCTAAAGAATGGTATGACAAAGCATGTGATATTGGATTTCAATCATCAGGTTGCGATGAATATAAGA
CTAATTATAGTAAATAA

Upstream 100 bases:

>100_bases
AAAAACATAGCCCCTCAAGAAAGGCTTTTTTTGCTAGTAGACTAAGTTTTTTAGCAAATGGTATGATTAACGAATAAACC
ACAGTTAGTGACGCGACTCT

Downstream 100 bases:

>100_bases
TTTTGAATAGAGAAGAGTTGACTTAGATTAATTTTCCTGAGGTATACCCCAATGGAACCAGCTATTTCACCCTCTAAACC
TATTAACAGACCACTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIFSKSKMTTTLLFLLSSPFLLMGCQQIQSATNQQALQTQLKVKKESDVAKLQRLAEQGDVKSQFNLAERYREGIEINID
CDKATYWYNKAANEGDIAAQSNLGVMYSLGYCVSQDYNKAVYWYTKAADQGDVAAQFTLGDLYHKGYGVPQDYNKAIYWY
TKAASQDYPFAQYAIATMYEKGQGVRQDYAIAKEWYDKACDIGFQSSGCDEYKTNYSK

Sequences:

>Translated_218_residues
MIFSKSKMTTTLLFLLSSPFLLMGCQQIQSATNQQALQTQLKVKKESDVAKLQRLAEQGDVKSQFNLAERYREGIEINID
CDKATYWYNKAANEGDIAAQSNLGVMYSLGYCVSQDYNKAVYWYTKAADQGDVAAQFTLGDLYHKGYGVPQDYNKAIYWY
TKAASQDYPFAQYAIATMYEKGQGVRQDYAIAKEWYDKACDIGFQSSGCDEYKTNYSK
>Mature_218_residues
MIFSKSKMTTTLLFLLSSPFLLMGCQQIQSATNQQALQTQLKVKKESDVAKLQRLAEQGDVKSQFNLAERYREGIEINID
CDKATYWYNKAANEGDIAAQSNLGVMYSLGYCVSQDYNKAVYWYTKAADQGDVAAQFTLGDLYHKGYGVPQDYNKAIYWY
TKAASQDYPFAQYAIATMYEKGQGVRQDYAIAKEWYDKACDIGFQSSGCDEYKTNYSK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=153, Percent_Identity=35.9477124183007, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI151301150, Length=151, Percent_Identity=34.4370860927152, Blast_Score=81, Evalue=9e-16,
Organism=Escherichia coli, GI87081769, Length=153, Percent_Identity=43.1372549019608, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786867, Length=124, Percent_Identity=36.2903225806452, Blast_Score=75, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6319410, Length=172, Percent_Identity=31.3953488372093, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355295, Length=154, Percent_Identity=35.7142857142857, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 24752; Mature: 24752

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSKSKMTTTLLFLLSSPFLLMGCQQIQSATNQQALQTQLKVKKESDVAKLQRLAEQGD
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
VKSQFNLAERYREGIEINIDCDKATYWYNKAANEGDIAAQSNLGVMYSLGYCVSQDYNKA
CHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCEECCCCCEEEEHHHHHCCCCCCE
VYWYTKAADQGDVAAQFTLGDLYHKGYGVPQDYNKAIYWYTKAASQDYPFAQYAIATMYE
EEEEEECCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
KGQGVRQDYAIAKEWYDKACDIGFQSSGCDEYKTNYSK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MIFSKSKMTTTLLFLLSSPFLLMGCQQIQSATNQQALQTQLKVKKESDVAKLQRLAEQGD
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
VKSQFNLAERYREGIEINIDCDKATYWYNKAANEGDIAAQSNLGVMYSLGYCVSQDYNKA
CHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCEECCCCCEEEEHHHHHCCCCCCE
VYWYTKAADQGDVAAQFTLGDLYHKGYGVPQDYNKAIYWYTKAASQDYPFAQYAIATMYE
EEEEEECCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
KGQGVRQDYAIAKEWYDKACDIGFQSSGCDEYKTNYSK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]