| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is msrAB [H]
Identifier: 93006253
GI number: 93006253
Start: 1753471
End: 1754721
Strand: Reverse
Name: msrAB [H]
Synonym: Pcryo_1427
Alternate gene names: 93006253
Gene position: 1754721-1753471 (Counterclockwise)
Preceding gene: 93006254
Following gene: 93006252
Centisome position: 57.35
GC content: 44.04
Gene sequence:
>1251_bases ATGACACACCGATTATTAGTGAATTATAAATTACCAGCTAAAGTCGTGGGTATGGCGATAGTAGCGAGCAGTGTCTTTTA TGTCGGTTGCGCCTCCACTGAAAAACCGCCTACCATAAAAGATGTTTCCATTGACAATCCTTATGCGCCTACTGACCCTA ATTTAGCAGTAGCGACGGTCGCTGGTGGCTGCTTTTGGTGTGTCGAGGCGGGTTATGAAAAGATTCCTGGTGTGGTAGAG GTGGTGTCAGGTTATACAGGTGGCGAATCTAAAAACCCAACTTATAAACAAGTATCAGCAGGTGGTACGGGTCATACGGA AGCGGCTCAAGTTTATTATGATCCGACCAAGATTACCTACAATGGTATCGTTCAAGCACTATGGCGAATCGCTGATCCTA CTGATGATAAAGGTCAGTTTGTAGATAGAGGCACCCAGTATCGCCCAGCTATTTTTTATAATAGTGAGCAAGAAAAACAG ATAGCCGAAGCTGCCAAGCAATCGCTGCAAGCCTCTGGCGTCTATAAAAAGCCAGTCGTAATCGAGATTGTGCCTGTTAG CGAATTTTATCCAGCAGAAGAGTATCATCAGGATTATTACAAAAAGAATCCACTACGTTATAAGGCCTATACGTTTAACT CTGGTCGCTACCAGTTCATTGAAAGTGTCTATGGCAAAAAATATGAGTTAGATTTCAACCAATTCAAACCGACTGTAACC AGTGCAAAGTCAGCAATGTCGAATACCTCGTCAGCTGCAGTAAAGCCGTCGACAGTTAAGACAAGTGCAGGCTTTGACCC AGATACCTTTGTAAAACCGACAAAAGCTGATCTTAAAAAATCACTAAGTGACATTCAATATAAAGTCTCTCAGGAAGATA GTACTGAGCGCGCTTTTGATAACGAATATTGGGATAATAAAGAACCTGGACTGTATGTCGATGTAGTATCAGGTGAACCA TTATATTCGTCTCGTGATCAATACAAGTCCGGTACAGGTTGGCCGAGCTTTACTCGTCCACTGAATGCTAGCTTTGTCGT AGAAAAGGCAGATCGAGGAATATTTGGCACCCGTACCGAGATTCGTAGCCGTTATGCAGATTCACACGTCGGTCATGTAT TTGACGATGGTCCGGCACCGACGGGTAAGCGCTATTGCATGAACTCAGCAGCAATGCGTTTTATCCCACTGGCGCAGATG GAAGCGGCTGGCTATGGTAGATGGATCAATGACGTAAAATCAGCTAGCTAA
Upstream 100 bases:
>100_bases CCATTCATTAAATATGGTGTATATAAACAACACTTTAGGAATATTTCTGTGAGACCTAAGGGTTACGATGGTTACATGAT ATTACCCTTAGGAGCCTTTC
Downstream 100 bases:
>100_bases TTCCCTTACTGTCATAAGAAATCAAAAACCGCTTATCATATCAGTAGTTAACTACTGATATGATAAGCGGTTTTTGTATG TGATGCTATATAGTCTTATT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase; Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTHRLLVNYKLPAKVVGMAIVASSVFYVGCASTEKPPTIKDVSIDNPYAPTDPNLAVATVAGGCFWCVEAGYEKIPGVVE VVSGYTGGESKNPTYKQVSAGGTGHTEAAQVYYDPTKITYNGIVQALWRIADPTDDKGQFVDRGTQYRPAIFYNSEQEKQ IAEAAKQSLQASGVYKKPVVIEIVPVSEFYPAEEYHQDYYKKNPLRYKAYTFNSGRYQFIESVYGKKYELDFNQFKPTVT SAKSAMSNTSSAAVKPSTVKTSAGFDPDTFVKPTKADLKKSLSDIQYKVSQEDSTERAFDNEYWDNKEPGLYVDVVSGEP LYSSRDQYKSGTGWPSFTRPLNASFVVEKADRGIFGTRTEIRSRYADSHVGHVFDDGPAPTGKRYCMNSAAMRFIPLAQM EAAGYGRWINDVKSAS
Sequences:
>Translated_416_residues MTHRLLVNYKLPAKVVGMAIVASSVFYVGCASTEKPPTIKDVSIDNPYAPTDPNLAVATVAGGCFWCVEAGYEKIPGVVE VVSGYTGGESKNPTYKQVSAGGTGHTEAAQVYYDPTKITYNGIVQALWRIADPTDDKGQFVDRGTQYRPAIFYNSEQEKQ IAEAAKQSLQASGVYKKPVVIEIVPVSEFYPAEEYHQDYYKKNPLRYKAYTFNSGRYQFIESVYGKKYELDFNQFKPTVT SAKSAMSNTSSAAVKPSTVKTSAGFDPDTFVKPTKADLKKSLSDIQYKVSQEDSTERAFDNEYWDNKEPGLYVDVVSGEP LYSSRDQYKSGTGWPSFTRPLNASFVVEKADRGIFGTRTEIRSRYADSHVGHVFDDGPAPTGKRYCMNSAAMRFIPLAQM EAAGYGRWINDVKSAS >Mature_415_residues THRLLVNYKLPAKVVGMAIVASSVFYVGCASTEKPPTIKDVSIDNPYAPTDPNLAVATVAGGCFWCVEAGYEKIPGVVEV VSGYTGGESKNPTYKQVSAGGTGHTEAAQVYYDPTKITYNGIVQALWRIADPTDDKGQFVDRGTQYRPAIFYNSEQEKQI AEAAKQSLQASGVYKKPVVIEIVPVSEFYPAEEYHQDYYKKNPLRYKAYTFNSGRYQFIESVYGKKYELDFNQFKPTVTS AKSAMSNTSSAAVKPSTVKTSAGFDPDTFVKPTKADLKKSLSDIQYKVSQEDSTERAFDNEYWDNKEPGLYVDVVSGEPL YSSRDQYKSGTGWPSFTRPLNASFVVEKADRGIFGTRTEIRSRYADSHVGHVFDDGPAPTGKRYCMNSAAMRFIPLAQME AAGYGRWINDVKSAS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0229
COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrB Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI301336164, Length=123, Percent_Identity=45.5284552845528, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI301336162, Length=123, Percent_Identity=45.5284552845528, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI73089054, Length=123, Percent_Identity=45.5284552845528, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI37620216, Length=123, Percent_Identity=45.5284552845528, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI117606353, Length=129, Percent_Identity=39.5348837209302, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI6912516, Length=153, Percent_Identity=36.6013071895425, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI208609995, Length=160, Percent_Identity=35.625, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=36.4485981308411, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=39.8692810457516, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788077, Length=123, Percent_Identity=43.9024390243902, Blast_Score=113, Evalue=2e-26, Organism=Caenorhabditis elegans, GI115532676, Length=122, Percent_Identity=36.8852459016393, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17553450, Length=122, Percent_Identity=36.8852459016393, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17533973, Length=137, Percent_Identity=33.5766423357664, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320881, Length=159, Percent_Identity=37.7358490566038, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI45553335, Length=122, Percent_Identity=44.2622950819672, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI21356369, Length=122, Percent_Identity=44.2622950819672, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24645799, Length=122, Percent_Identity=44.2622950819672, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24645804, Length=133, Percent_Identity=41.3533834586466, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI221378664, Length=125, Percent_Identity=43.2, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24645801, Length=133, Percent_Identity=41.3533834586466, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI221378662, Length=132, Percent_Identity=40.9090909090909, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24664627, Length=174, Percent_Identity=33.9080459770115, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI45553131, Length=139, Percent_Identity=35.9712230215827, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24664631, Length=162, Percent_Identity=33.9506172839506, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.11; =1.8.4.12 [H]
Molecular weight: Translated: 46054; Mature: 45923
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRLLVNYKLPAKVVGMAIVASSVFYVGCASTEKPPTIKDVSIDNPYAPTDPNLAVATV CCCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEE AGGCFWCVEAGYEKIPGVVEVVSGYTGGESKNPTYKQVSAGGTGHTEAAQVYYDPTKITY CCCEEEEEHHCHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEH NGIVQALWRIADPTDDKGQFVDRGTQYRPAIFYNSEQEKQIAEAAKQSLQASGVYKKPVV HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEE IEIVPVSEFYPAEEYHQDYYKKNPLRYKAYTFNSGRYQFIESVYGKKYELDFNQFKPTVT EEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCEEEECHHHHCCHHH SAKSAMSNTSSAAVKPSTVKTSAGFDPDTFVKPTKADLKKSLSDIQYKVSQEDSTERAFD HHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHC NEYWDNKEPGLYVDVVSGEPLYSSRDQYKSGTGWPSFTRPLNASFVVEKADRGIFGTRTE CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHH IRSRYADSHVGHVFDDGPAPTGKRYCMNSAAMRFIPLAQMEAAGYGRWINDVKSAS HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure THRLLVNYKLPAKVVGMAIVASSVFYVGCASTEKPPTIKDVSIDNPYAPTDPNLAVATV CCEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEE AGGCFWCVEAGYEKIPGVVEVVSGYTGGESKNPTYKQVSAGGTGHTEAAQVYYDPTKITY CCCEEEEEHHCHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEH NGIVQALWRIADPTDDKGQFVDRGTQYRPAIFYNSEQEKQIAEAAKQSLQASGVYKKPVV HHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEE IEIVPVSEFYPAEEYHQDYYKKNPLRYKAYTFNSGRYQFIESVYGKKYELDFNQFKPTVT EEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCEEEECHHHHCCHHH SAKSAMSNTSSAAVKPSTVKTSAGFDPDTFVKPTKADLKKSLSDIQYKVSQEDSTERAFD HHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHC NEYWDNKEPGLYVDVVSGEPLYSSRDQYKSGTGWPSFTRPLNASFVVEKADRGIFGTRTE CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHH IRSRYADSHVGHVFDDGPAPTGKRYCMNSAAMRFIPLAQMEAAGYGRWINDVKSAS HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]