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The map label for this gene is hrpA [H]

Identifier: 93006245

GI number: 93006245

Start: 1741710

End: 1745975

Strand: Reverse

Name: hrpA [H]

Synonym: Pcryo_1419

Alternate gene names: 93006245

Gene position: 1745975-1741710 (Counterclockwise)

Preceding gene: 93006246

Following gene: 93006244

Centisome position: 57.06

GC content: 45.24

Gene sequence:

>4266_bases
ATGCCTGATACTTCAACAGAAAATCAAGAAAAAATCCAGCCTGTACAAGCCGAAAATCTGAACGCCGAGACAAAAAATAC
GCAGAAAGAGAGTGTGAATGCTCAACAGGTTATTTCTGTTGCTAATTTACCCGTGCTCGCGAAGGATGAGTATTATCTCA
GTCGCCTTGAGCGTGAGCTGGCACGGGCAAAACCGTCTGCTAATAAAAATAGCAATACGGATGGCAAACACAACGTTAAA
AGTAGCAATGATTTGGATAAAAAACACGCCCAATATGAGCAATTAAAGGCTCGCTCGCAGCAAGCGGTGCAAGCGCGTAT
AGAGAGCATTCCAGATAGGCTGGCAGAAAAACTGAATCAGGATCTCCCTGTTAGCCAACGTGGTGATGATTTGATTCAGG
CAATCATCGATAACCAAGTGATTATCGTTGCAGGTGAGACAGGCTCCGGTAAAACTACGCAACTGCCTAAGTTAGCAATG
TTAGCAGGGCGCGGTATACGTGGCCAAATAGGGCATACACAGCCTCGACGACTGGCGGCACGCAGTGTGGCAAACCGTAT
CGCTGAAGAATTGGGCGAGCAGCTTGGTAATACGGTCAGCTTCAAGATTCGCTTTAACGAGCAGGGCACGGCGCAATCTG
TCGTTAAACTAATGACTGATGGTATTTTGCTTGCTGAACTTGGTCATGATCGTTTTTTGAGTAAATACGATACTATTATT
ATTGATGAAGCCCATGAGCGTAGTTTAAACATTGACTTTATTATGGGTTATTTAAAAAAACTGCTGCCAAAGCGCCCTGA
TTTAAAAGTCATTATTACCTCAGCGACACTGGACACTAAACGCTTTAGTGAATACTTTAGTCGCTACGATAATAAGCTTA
AACGGCAAATTCCTGCGCCTATTTTTAATGTCGAAGGACGAAGCTTCCCTGTCGAAGTGCGTTATCGTCCGTTAACAGAT
GAGCCCGTAACCAGCTCAGACGATGATAGCTATGATGACTTTGAAGAAAATCTGCCACGTGCGGTGGTTGCTGCAGTGGA
AGAATGCTTTAGCGATGCACAAAATAAAGGTCATGCCGATCAAGCAGATATCTTGATATTTGCTGCAACTGAAGCTGAGA
TTCGTGAGCTCCAAGAGGTGCTTGAGCGTCATGGACCTAAACATACAGAAGTGTTGCCACTATTTGCACGGCAGACTTAT
GAAGAGCAACAGCGTATCTTTCAGCCATCAGGTCGCGGCCGACGTATTGTTATCGCGACTAACGTCGCTGAGACGGCATT
GACCGTACCCGGCATTCGCTATGTGATTGATTTGGGTTTTGCGCGTATATCACGCTATTCTTATCGTTCGCGCGTACAGC
GTTTACCAATTGAAGCCATCTCGCAAGCTGCTGCCAATCAGCGTAAAGGGCGTTGTGGTCGTGTTGCGCCGGGTGTTTGT
ATTCGTTTATATAGCGAAGAGGACTTTACTGGTCGTCCTGAATTTACGGAACCTGAGATTTTACGCACTAACTTAGCATC
CGTTATTTTACAAATGGCAAATCTGCGCCTAGGAAGCGTCGATGATTTCGCCTTCATTGAGCCACCTGACAGTCGCTTGG
TTACTGATGGACATAAATTGCTTGATGAGTTAGGCGCGATTACTGCTAAAAACGACGTACCTTCAGCTAAACAAACTAAC
AAGCCAAAATCAAAACAGGGTCTGGATCATCTGGTTCTGACACCGACTGGTCAAAAGATGGCACGTATGCCAATCGATCC
AAGGCTGGCACGTATGCTGGTAGCTGGTAGCGATTTTGACTGTATCCGAGAAATGCTCATTGTCGTTGCGGCGCTTGCTG
TCCAAGATTCACGCGAGCGGCCAGTAAATAAGCGCCAGCAAGCGGATCAGAAGCATGCTGAATTTCGCCAAGATGACTCT
GATTTTTTATTCTATTTAAGTCTGTGGAAAGCCCTGTTTGAGAAAGACGAAGATGGCAATAAGTTGTCTGGCAATCAGCG
TAAGCAGTTTACGAAGAAAAACTATCTAAGCTTCCCGCGTGTACGTGAGTGGAGTCAAACCCATCGTCAGTTAGTACAAA
TGGTCACTGAGCTTAAGCTGACTGATGCTAACGAGGCAAAAACTGCTGACAAGAATGCCTCGAAAGAAGTGACTCACAGT
GACCCTACCGCGATTGAAGATGAAGAACTCAAAGCTGTTAAATACGGCAATTTACATCGCGCATTATTAACAGGTCTATT
GTCTACGATTGCTCACAAAACTGAAAATCGCGGTGAATACTTAGCCGCTCGCCAGCAGAAAGCCAAAATATTCCCAGCCA
GTACGGTTTTTAAGCAAATACCACCTTGGGTCATGGCTTTTGAAGTGGTCGAAACCTCACAAGTCTTTATGCGTACCGTT
GCCAAGATTGAACCAGAATGGATTATCTCAGCCGCCGGTAACTTATTAAAGTATCACTACTTTGAGCCACATTGGTCGAA
GAAGACGGGGCGTGTCAAAGCTTATGCCCAGATCAGTTTATTCGGGCTGATTATTATCAGTAAGCAACTGACCAACTATG
AGCAAGTTAATCTAAGCGAGTCGCGCGAGATATTTATCCGTGACGGTCTGGTTACTGGAAATTTAGGTAGACAAGCACCG
TTCTTACAGCATAATATGGATAAAATTGCTGACATTGAACGCATCGAGGATAAATTACGCCGCCGTGATTTATTGGTCGA
TGAAGAGTCCTTGTATCAGTTTTATGATAAAAAAATCCCCGATCATATTGCGAGCCGCAAAACGTTTGAAGACTGGCGTG
CCGAAGTTGAAAAAACCGATACTAAGTATCTGTTCTTTACCGATGAAGACGTGCTTAATAGCCAAGCGCCAACGACAGGC
GATTTCCCAGAAGTGTGGAAACTTGGCGATTTAAAGTTGCCACTACGCTATATTTTTGATCCAGCGAGCGATGATGATGG
GGTGACCATCCGTGTGCCACTTGTCGCGCTACCGCAGCTTGATGCGATTGAGCTGTTATGGGGTGTACCCGGTTGGCGTT
ATGAGCTGGTATTACAGTTATTAAAATCATTACCAAAAGACATTCGTCGTCAGATTGTACCTATTCCTGATACTGCCGAT
AGCTTGTTTGATGAATTGCAGCCTGCGGGTGGACAGGGGTTATTAAAACAGCTTTGCCAAGCACTTAACCGCCGTGGCAT
TATGTCAGTTACTACAGAGCATTTTAATCCGTCTAGTATTGATCGTTATTTGCAGCCACAAATCTGCGTGGTCGATGATA
AGAACCGTATCATCGAAAAAGGACGCGATCTGCAAACGCTACAGATTCGCCATGCTTCTCAGACGCGCCAAGCGGTGAAT
GAGCAGCAAGGCGCGCATACAGAATTTCCTGAGCACTTTGCCTTTAGTAAAAACCATCATAGCGCAGGTGTGGTTATGAA
GCAGTTTGCTGCTTTGGTTGCTGACGAGGCAGGTGAAGCGGTATCTATCCATCAATATACCGATGTTAATGCAGCACTGC
AGGCGCACCGTATCGGGGTGTTAACGCTAATCAAAAGCAGACTTGGCTCAAAGAAAAAACAGCTGACCAGTCAAGTTGAT
AACATATTTAAACTGGCATTCGCACCGCTTGGCGATATGGAAAAGCTTAAGACTATCATTATTGATGCGACTTTAGATGC
AACACTCGAAGAGCACTATGTATTGTTTGATCATACGGCAGACCTACCTGAGAGTGCTAATGATGTTGCGGTTGGACTCA
GTGAGGAGCTACCCTTTACTCCTGAAGAGTATAGCCAAACGCTCGATGTGCTACTAAGTAACTTCTTGCTGATTGGTCAA
ACGGTTATAAAAACGCTCAAAAGCGTTTATACCCGCTGGCAACGTATTCGCCAAAGCATGCTAATGCTTGATCGAGAGAT
ATTTGGCGAGTCTATTGAAGATATTGAAGATCAGTTAGCAGATTTGCATTTGGCTGATTTTGTTTATCGTATGGATTATA
GCCACTGGCAGCAGTATCCACGCTATCTGGAAGCGCTAGAGATTCGTATCGACCGCCTTGAGCACAATGTCGAAGCTGAC
CTCGATGGCGTCTATGCCCTTGACTTACATATGGAAAGACTTGCAGGACGTGCTAATGATAAAGCCATCAGCGATTACCG
CTGGATGGTCGAGGAGTACCGCATTCAACTGTTTGCTCAGCCGATGAAAACCCGTATGGCGGTATCGCCCAAGCGTCTAA
GTAAGATATGGGATAAAATGAGTTAG

Upstream 100 bases:

>100_bases
AGCAACAACTCAAGTCTAGGCCATACACGAGTAACTTGAATCGCAGCTCAATTATCCCCATAATCTAACAACTCCTAAAT
AATAAATAGCCTAAGTAAAT

Downstream 100 bases:

>100_bases
CATAAAAGTAAGTACTTCAGTAACCGTTCGCAAATTTTTATGGTCATGCTTTTAGTTGCTAGTTGCTAGTTGCTAGTTGC
TAGTTGCTAGTTGCTAGTTG

Product: ATP-dependent helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1421; Mature: 1420

Protein sequence:

>1421_residues
MPDTSTENQEKIQPVQAENLNAETKNTQKESVNAQQVISVANLPVLAKDEYYLSRLERELARAKPSANKNSNTDGKHNVK
SSNDLDKKHAQYEQLKARSQQAVQARIESIPDRLAEKLNQDLPVSQRGDDLIQAIIDNQVIIVAGETGSGKTTQLPKLAM
LAGRGIRGQIGHTQPRRLAARSVANRIAEELGEQLGNTVSFKIRFNEQGTAQSVVKLMTDGILLAELGHDRFLSKYDTII
IDEAHERSLNIDFIMGYLKKLLPKRPDLKVIITSATLDTKRFSEYFSRYDNKLKRQIPAPIFNVEGRSFPVEVRYRPLTD
EPVTSSDDDSYDDFEENLPRAVVAAVEECFSDAQNKGHADQADILIFAATEAEIRELQEVLERHGPKHTEVLPLFARQTY
EEQQRIFQPSGRGRRIVIATNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVC
IRLYSEEDFTGRPEFTEPEILRTNLASVILQMANLRLGSVDDFAFIEPPDSRLVTDGHKLLDELGAITAKNDVPSAKQTN
KPKSKQGLDHLVLTPTGQKMARMPIDPRLARMLVAGSDFDCIREMLIVVAALAVQDSRERPVNKRQQADQKHAEFRQDDS
DFLFYLSLWKALFEKDEDGNKLSGNQRKQFTKKNYLSFPRVREWSQTHRQLVQMVTELKLTDANEAKTADKNASKEVTHS
DPTAIEDEELKAVKYGNLHRALLTGLLSTIAHKTENRGEYLAARQQKAKIFPASTVFKQIPPWVMAFEVVETSQVFMRTV
AKIEPEWIISAAGNLLKYHYFEPHWSKKTGRVKAYAQISLFGLIIISKQLTNYEQVNLSESREIFIRDGLVTGNLGRQAP
FLQHNMDKIADIERIEDKLRRRDLLVDEESLYQFYDKKIPDHIASRKTFEDWRAEVEKTDTKYLFFTDEDVLNSQAPTTG
DFPEVWKLGDLKLPLRYIFDPASDDDGVTIRVPLVALPQLDAIELLWGVPGWRYELVLQLLKSLPKDIRRQIVPIPDTAD
SLFDELQPAGGQGLLKQLCQALNRRGIMSVTTEHFNPSSIDRYLQPQICVVDDKNRIIEKGRDLQTLQIRHASQTRQAVN
EQQGAHTEFPEHFAFSKNHHSAGVVMKQFAALVADEAGEAVSIHQYTDVNAALQAHRIGVLTLIKSRLGSKKKQLTSQVD
NIFKLAFAPLGDMEKLKTIIIDATLDATLEEHYVLFDHTADLPESANDVAVGLSEELPFTPEEYSQTLDVLLSNFLLIGQ
TVIKTLKSVYTRWQRIRQSMLMLDREIFGESIEDIEDQLADLHLADFVYRMDYSHWQQYPRYLEALEIRIDRLEHNVEAD
LDGVYALDLHMERLAGRANDKAISDYRWMVEEYRIQLFAQPMKTRMAVSPKRLSKIWDKMS

Sequences:

>Translated_1421_residues
MPDTSTENQEKIQPVQAENLNAETKNTQKESVNAQQVISVANLPVLAKDEYYLSRLERELARAKPSANKNSNTDGKHNVK
SSNDLDKKHAQYEQLKARSQQAVQARIESIPDRLAEKLNQDLPVSQRGDDLIQAIIDNQVIIVAGETGSGKTTQLPKLAM
LAGRGIRGQIGHTQPRRLAARSVANRIAEELGEQLGNTVSFKIRFNEQGTAQSVVKLMTDGILLAELGHDRFLSKYDTII
IDEAHERSLNIDFIMGYLKKLLPKRPDLKVIITSATLDTKRFSEYFSRYDNKLKRQIPAPIFNVEGRSFPVEVRYRPLTD
EPVTSSDDDSYDDFEENLPRAVVAAVEECFSDAQNKGHADQADILIFAATEAEIRELQEVLERHGPKHTEVLPLFARQTY
EEQQRIFQPSGRGRRIVIATNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVC
IRLYSEEDFTGRPEFTEPEILRTNLASVILQMANLRLGSVDDFAFIEPPDSRLVTDGHKLLDELGAITAKNDVPSAKQTN
KPKSKQGLDHLVLTPTGQKMARMPIDPRLARMLVAGSDFDCIREMLIVVAALAVQDSRERPVNKRQQADQKHAEFRQDDS
DFLFYLSLWKALFEKDEDGNKLSGNQRKQFTKKNYLSFPRVREWSQTHRQLVQMVTELKLTDANEAKTADKNASKEVTHS
DPTAIEDEELKAVKYGNLHRALLTGLLSTIAHKTENRGEYLAARQQKAKIFPASTVFKQIPPWVMAFEVVETSQVFMRTV
AKIEPEWIISAAGNLLKYHYFEPHWSKKTGRVKAYAQISLFGLIIISKQLTNYEQVNLSESREIFIRDGLVTGNLGRQAP
FLQHNMDKIADIERIEDKLRRRDLLVDEESLYQFYDKKIPDHIASRKTFEDWRAEVEKTDTKYLFFTDEDVLNSQAPTTG
DFPEVWKLGDLKLPLRYIFDPASDDDGVTIRVPLVALPQLDAIELLWGVPGWRYELVLQLLKSLPKDIRRQIVPIPDTAD
SLFDELQPAGGQGLLKQLCQALNRRGIMSVTTEHFNPSSIDRYLQPQICVVDDKNRIIEKGRDLQTLQIRHASQTRQAVN
EQQGAHTEFPEHFAFSKNHHSAGVVMKQFAALVADEAGEAVSIHQYTDVNAALQAHRIGVLTLIKSRLGSKKKQLTSQVD
NIFKLAFAPLGDMEKLKTIIIDATLDATLEEHYVLFDHTADLPESANDVAVGLSEELPFTPEEYSQTLDVLLSNFLLIGQ
TVIKTLKSVYTRWQRIRQSMLMLDREIFGESIEDIEDQLADLHLADFVYRMDYSHWQQYPRYLEALEIRIDRLEHNVEAD
LDGVYALDLHMERLAGRANDKAISDYRWMVEEYRIQLFAQPMKTRMAVSPKRLSKIWDKMS
>Mature_1420_residues
PDTSTENQEKIQPVQAENLNAETKNTQKESVNAQQVISVANLPVLAKDEYYLSRLERELARAKPSANKNSNTDGKHNVKS
SNDLDKKHAQYEQLKARSQQAVQARIESIPDRLAEKLNQDLPVSQRGDDLIQAIIDNQVIIVAGETGSGKTTQLPKLAML
AGRGIRGQIGHTQPRRLAARSVANRIAEELGEQLGNTVSFKIRFNEQGTAQSVVKLMTDGILLAELGHDRFLSKYDTIII
DEAHERSLNIDFIMGYLKKLLPKRPDLKVIITSATLDTKRFSEYFSRYDNKLKRQIPAPIFNVEGRSFPVEVRYRPLTDE
PVTSSDDDSYDDFEENLPRAVVAAVEECFSDAQNKGHADQADILIFAATEAEIRELQEVLERHGPKHTEVLPLFARQTYE
EQQRIFQPSGRGRRIVIATNVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCI
RLYSEEDFTGRPEFTEPEILRTNLASVILQMANLRLGSVDDFAFIEPPDSRLVTDGHKLLDELGAITAKNDVPSAKQTNK
PKSKQGLDHLVLTPTGQKMARMPIDPRLARMLVAGSDFDCIREMLIVVAALAVQDSRERPVNKRQQADQKHAEFRQDDSD
FLFYLSLWKALFEKDEDGNKLSGNQRKQFTKKNYLSFPRVREWSQTHRQLVQMVTELKLTDANEAKTADKNASKEVTHSD
PTAIEDEELKAVKYGNLHRALLTGLLSTIAHKTENRGEYLAARQQKAKIFPASTVFKQIPPWVMAFEVVETSQVFMRTVA
KIEPEWIISAAGNLLKYHYFEPHWSKKTGRVKAYAQISLFGLIIISKQLTNYEQVNLSESREIFIRDGLVTGNLGRQAPF
LQHNMDKIADIERIEDKLRRRDLLVDEESLYQFYDKKIPDHIASRKTFEDWRAEVEKTDTKYLFFTDEDVLNSQAPTTGD
FPEVWKLGDLKLPLRYIFDPASDDDGVTIRVPLVALPQLDAIELLWGVPGWRYELVLQLLKSLPKDIRRQIVPIPDTADS
LFDELQPAGGQGLLKQLCQALNRRGIMSVTTEHFNPSSIDRYLQPQICVVDDKNRIIEKGRDLQTLQIRHASQTRQAVNE
QQGAHTEFPEHFAFSKNHHSAGVVMKQFAALVADEAGEAVSIHQYTDVNAALQAHRIGVLTLIKSRLGSKKKQLTSQVDN
IFKLAFAPLGDMEKLKTIIIDATLDATLEEHYVLFDHTADLPESANDVAVGLSEELPFTPEEYSQTLDVLLSNFLLIGQT
VIKTLKSVYTRWQRIRQSMLMLDREIFGESIEDIEDQLADLHLADFVYRMDYSHWQQYPRYLEALEIRIDRLEHNVEADL
DGVYALDLHMERLAGRANDKAISDYRWMVEEYRIQLFAQPMKTRMAVSPKRLSKIWDKMS

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=706, Percent_Identity=34.8441926345609, Blast_Score=388, Evalue=1e-107,
Organism=Homo sapiens, GI68509926, Length=774, Percent_Identity=32.687338501292, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI20544129, Length=733, Percent_Identity=31.2414733969986, Blast_Score=358, Evalue=2e-98,
Organism=Homo sapiens, GI256000749, Length=733, Percent_Identity=33.8335607094134, Blast_Score=357, Evalue=4e-98,
Organism=Homo sapiens, GI255982614, Length=735, Percent_Identity=33.8775510204082, Blast_Score=357, Evalue=5e-98,
Organism=Homo sapiens, GI299829255, Length=697, Percent_Identity=30.8464849354376, Blast_Score=328, Evalue=2e-89,
Organism=Homo sapiens, GI17999539, Length=702, Percent_Identity=31.6239316239316, Blast_Score=327, Evalue=4e-89,
Organism=Homo sapiens, GI20336302, Length=708, Percent_Identity=30.7909604519774, Blast_Score=322, Evalue=2e-87,
Organism=Homo sapiens, GI38158022, Length=598, Percent_Identity=32.6086956521739, Blast_Score=318, Evalue=2e-86,
Organism=Homo sapiens, GI261878478, Length=729, Percent_Identity=30.5898491083676, Blast_Score=305, Evalue=2e-82,
Organism=Homo sapiens, GI67782362, Length=781, Percent_Identity=25.3521126760563, Blast_Score=244, Evalue=3e-64,
Organism=Homo sapiens, GI167830433, Length=772, Percent_Identity=26.0362694300518, Blast_Score=241, Evalue=5e-63,
Organism=Homo sapiens, GI167830436, Length=767, Percent_Identity=26.5971316818774, Blast_Score=238, Evalue=5e-62,
Organism=Homo sapiens, GI166851804, Length=614, Percent_Identity=29.3159609120521, Blast_Score=237, Evalue=8e-62,
Organism=Homo sapiens, GI261878481, Length=706, Percent_Identity=28.1869688385269, Blast_Score=229, Evalue=1e-59,
Organism=Homo sapiens, GI20336290, Length=716, Percent_Identity=27.6536312849162, Blast_Score=228, Evalue=2e-59,
Organism=Homo sapiens, GI20336294, Length=716, Percent_Identity=27.6536312849162, Blast_Score=228, Evalue=3e-59,
Organism=Homo sapiens, GI20336300, Length=723, Percent_Identity=24.3430152143845, Blast_Score=197, Evalue=8e-50,
Organism=Homo sapiens, GI163914394, Length=724, Percent_Identity=22.9281767955801, Blast_Score=159, Evalue=2e-38,
Organism=Homo sapiens, GI29029601, Length=463, Percent_Identity=28.2937365010799, Blast_Score=155, Evalue=3e-37,
Organism=Homo sapiens, GI39777586, Length=476, Percent_Identity=26.2605042016807, Blast_Score=151, Evalue=4e-36,
Organism=Homo sapiens, GI269847874, Length=213, Percent_Identity=37.0892018779343, Blast_Score=140, Evalue=7e-33,
Organism=Homo sapiens, GI100913206, Length=196, Percent_Identity=34.6938775510204, Blast_Score=122, Evalue=3e-27,
Organism=Escherichia coli, GI145693127, Length=1368, Percent_Identity=40.1315789473684, Blast_Score=935, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=481, Percent_Identity=32.6403326403326, Blast_Score=221, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17535281, Length=709, Percent_Identity=35.8251057827927, Blast_Score=395, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI25144243, Length=721, Percent_Identity=32.4549237170596, Blast_Score=352, Evalue=6e-97,
Organism=Caenorhabditis elegans, GI17531507, Length=735, Percent_Identity=32.2448979591837, Blast_Score=349, Evalue=5e-96,
Organism=Caenorhabditis elegans, GI32565154, Length=715, Percent_Identity=32.4475524475524, Blast_Score=346, Evalue=6e-95,
Organism=Caenorhabditis elegans, GI17554326, Length=704, Percent_Identity=33.2386363636364, Blast_Score=336, Evalue=6e-92,
Organism=Caenorhabditis elegans, GI17556386, Length=717, Percent_Identity=30.9623430962343, Blast_Score=325, Evalue=9e-89,
Organism=Caenorhabditis elegans, GI71990212, Length=706, Percent_Identity=30.8781869688385, Blast_Score=287, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI71996313, Length=606, Percent_Identity=32.3432343234323, Blast_Score=276, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI86562256, Length=635, Percent_Identity=27.0866141732283, Blast_Score=193, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17507503, Length=368, Percent_Identity=28.2608695652174, Blast_Score=140, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17552054, Length=288, Percent_Identity=32.2916666666667, Blast_Score=135, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321318, Length=715, Percent_Identity=33.8461538461538, Blast_Score=378, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6320850, Length=720, Percent_Identity=33.6111111111111, Blast_Score=369, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6324338, Length=763, Percent_Identity=31.1926605504587, Blast_Score=311, Evalue=6e-85,
Organism=Saccharomyces cerevisiae, GI6322939, Length=720, Percent_Identity=33.6111111111111, Blast_Score=294, Evalue=7e-80,
Organism=Saccharomyces cerevisiae, GI6322772, Length=782, Percent_Identity=28.5166240409207, Blast_Score=283, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6323451, Length=595, Percent_Identity=27.563025210084, Blast_Score=192, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6323776, Length=231, Percent_Identity=37.2294372294372, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI20129977, Length=710, Percent_Identity=35.6338028169014, Blast_Score=394, Evalue=1e-109,
Organism=Drosophila melanogaster, GI19921728, Length=708, Percent_Identity=34.0395480225989, Blast_Score=375, Evalue=1e-103,
Organism=Drosophila melanogaster, GI19921526, Length=731, Percent_Identity=32.5581395348837, Blast_Score=360, Evalue=3e-99,
Organism=Drosophila melanogaster, GI18859729, Length=726, Percent_Identity=31.6804407713499, Blast_Score=327, Evalue=3e-89,
Organism=Drosophila melanogaster, GI45550174, Length=707, Percent_Identity=30.6930693069307, Blast_Score=319, Evalue=8e-87,
Organism=Drosophila melanogaster, GI19920696, Length=719, Percent_Identity=30.0417246175243, Blast_Score=302, Evalue=1e-81,
Organism=Drosophila melanogaster, GI24643238, Length=623, Percent_Identity=30.3370786516854, Blast_Score=284, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24585491, Length=657, Percent_Identity=29.6803652968037, Blast_Score=257, Evalue=4e-68,
Organism=Drosophila melanogaster, GI24585920, Length=545, Percent_Identity=31.1926605504587, Blast_Score=229, Evalue=7e-60,
Organism=Drosophila melanogaster, GI17136342, Length=545, Percent_Identity=31.1926605504587, Blast_Score=229, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24642763, Length=575, Percent_Identity=28.5217391304348, Blast_Score=206, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17136508, Length=562, Percent_Identity=29.3594306049822, Blast_Score=203, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24641139, Length=724, Percent_Identity=27.2099447513812, Blast_Score=197, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24641942, Length=572, Percent_Identity=26.5734265734266, Blast_Score=181, Evalue=2e-45,
Organism=Drosophila melanogaster, GI17136242, Length=271, Percent_Identity=37.2693726937269, Blast_Score=155, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 161613; Mature: 161482

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTSTENQEKIQPVQAENLNAETKNTQKESVNAQQVISVANLPVLAKDEYYLSRLEREL
CCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCHHHHHHHHCCCEEECCHHHHHHHHHHH
ARAKPSANKNSNTDGKHNVKSSNDLDKKHAQYEQLKARSQQAVQARIESIPDRLAEKLNQ
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLPVSQRGDDLIQAIIDNQVIIVAGETGSGKTTQLPKLAMLAGRGIRGQIGHTQPRRLAA
CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH
RSVANRIAEELGEQLGNTVSFKIRFNEQGTAQSVVKLMTDGILLAELGHDRFLSKYDTII
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCCHHHHHHHCEEE
IDEAHERSLNIDFIMGYLKKLLPKRPDLKVIITSATLDTKRFSEYFSRYDNKLKRQIPAP
EECHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
IFNVEGRSFPVEVRYRPLTDEPVTSSDDDSYDDFEENLPRAVVAAVEECFSDAQNKGHAD
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC
QADILIFAATEAEIRELQEVLERHGPKHTEVLPLFARQTYEEQQRIFQPSGRGRRIVIAT
CCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
NVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVC
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEE
IRLYSEEDFTGRPEFTEPEILRTNLASVILQMANLRLGSVDDFAFIEPPDSRLVTDGHKL
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCHHHH
LDELGAITAKNDVPSAKQTNKPKSKQGLDHLVLTPTGQKMARMPIDPRLARMLVAGSDFD
HHHHCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCHH
CIREMLIVVAALAVQDSRERPVNKRQQADQKHAEFRQDDSDFLFYLSLWKALFEKDEDGN
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
KLSGNQRKQFTKKNYLSFPRVREWSQTHRQLVQMVTELKLTDANEAKTADKNASKEVTHS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
DPTAIEDEELKAVKYGNLHRALLTGLLSTIAHKTENRGEYLAARQQKAKIFPASTVFKQI
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHC
PPWVMAFEVVETSQVFMRTVAKIEPEWIISAAGNLLKYHYFEPHWSKKTGRVKAYAQISL
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEHHHHH
FGLIIISKQLTNYEQVNLSESREIFIRDGLVTGNLGRQAPFLQHNMDKIADIERIEDKLR
HHHHHHHHHHCCCHHCCCCCCCEEEEECCEEECCCCCCCCHHHHCHHHHHHHHHHHHHHH
RRDLLVDEESLYQFYDKKIPDHIASRKTFEDWRAEVEKTDTKYLFFTDEDVLNSQAPTTG
HHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC
DFPEVWKLGDLKLPLRYIFDPASDDDGVTIRVPLVALPQLDAIELLWGVPGWRYELVLQL
CCHHHHCCCCCCCCHHHEECCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHH
LKSLPKDIRRQIVPIPDTADSLFDELQPAGGQGLLKQLCQALNRRGIMSVTTEHFNPSSI
HHHCCHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHH
DRYLQPQICVVDDKNRIIEKGRDLQTLQIRHASQTRQAVNEQQGAHTEFPEHFAFSKNHH
HHHCCCCEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
SAGVVMKQFAALVADEAGEAVSIHQYTDVNAALQAHRIGVLTLIKSRLGSKKKQLTSQVD
HHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NIFKLAFAPLGDMEKLKTIIIDATLDATLEEHYVLFDHTADLPESANDVAVGLSEELPFT
HHHHHHHCCCCCHHHHHHHHEECHHHHHHHHCEEEEECCCCCCCCCCCEEEECCCCCCCC
PEEYSQTLDVLLSNFLLIGQTVIKTLKSVYTRWQRIRQSMLMLDREIFGESIEDIEDQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DLHLADFVYRMDYSHWQQYPRYLEALEIRIDRLEHNVEADLDGVYALDLHMERLAGRAND
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCC
KAISDYRWMVEEYRIQLFAQPMKTRMAVSPKRLSKIWDKMS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PDTSTENQEKIQPVQAENLNAETKNTQKESVNAQQVISVANLPVLAKDEYYLSRLEREL
CCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCHHHHHHHHCCCEEECCHHHHHHHHHHH
ARAKPSANKNSNTDGKHNVKSSNDLDKKHAQYEQLKARSQQAVQARIESIPDRLAEKLNQ
HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLPVSQRGDDLIQAIIDNQVIIVAGETGSGKTTQLPKLAMLAGRGIRGQIGHTQPRRLAA
CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH
RSVANRIAEELGEQLGNTVSFKIRFNEQGTAQSVVKLMTDGILLAELGHDRFLSKYDTII
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCCHHHHHHHCEEE
IDEAHERSLNIDFIMGYLKKLLPKRPDLKVIITSATLDTKRFSEYFSRYDNKLKRQIPAP
EECHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
IFNVEGRSFPVEVRYRPLTDEPVTSSDDDSYDDFEENLPRAVVAAVEECFSDAQNKGHAD
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC
QADILIFAATEAEIRELQEVLERHGPKHTEVLPLFARQTYEEQQRIFQPSGRGRRIVIAT
CCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
NVAETALTVPGIRYVIDLGFARISRYSYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVC
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEE
IRLYSEEDFTGRPEFTEPEILRTNLASVILQMANLRLGSVDDFAFIEPPDSRLVTDGHKL
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEECCHHHH
LDELGAITAKNDVPSAKQTNKPKSKQGLDHLVLTPTGQKMARMPIDPRLARMLVAGSDFD
HHHHCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCHH
CIREMLIVVAALAVQDSRERPVNKRQQADQKHAEFRQDDSDFLFYLSLWKALFEKDEDGN
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
KLSGNQRKQFTKKNYLSFPRVREWSQTHRQLVQMVTELKLTDANEAKTADKNASKEVTHS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
DPTAIEDEELKAVKYGNLHRALLTGLLSTIAHKTENRGEYLAARQQKAKIFPASTVFKQI
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHC
PPWVMAFEVVETSQVFMRTVAKIEPEWIISAAGNLLKYHYFEPHWSKKTGRVKAYAQISL
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEHHHHH
FGLIIISKQLTNYEQVNLSESREIFIRDGLVTGNLGRQAPFLQHNMDKIADIERIEDKLR
HHHHHHHHHHCCCHHCCCCCCCEEEEECCEEECCCCCCCCHHHHCHHHHHHHHHHHHHHH
RRDLLVDEESLYQFYDKKIPDHIASRKTFEDWRAEVEKTDTKYLFFTDEDVLNSQAPTTG
HHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCC
DFPEVWKLGDLKLPLRYIFDPASDDDGVTIRVPLVALPQLDAIELLWGVPGWRYELVLQL
CCHHHHCCCCCCCCHHHEECCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHH
LKSLPKDIRRQIVPIPDTADSLFDELQPAGGQGLLKQLCQALNRRGIMSVTTEHFNPSSI
HHHCCHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHH
DRYLQPQICVVDDKNRIIEKGRDLQTLQIRHASQTRQAVNEQQGAHTEFPEHFAFSKNHH
HHHCCCCEEEECCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
SAGVVMKQFAALVADEAGEAVSIHQYTDVNAALQAHRIGVLTLIKSRLGSKKKQLTSQVD
HHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NIFKLAFAPLGDMEKLKTIIIDATLDATLEEHYVLFDHTADLPESANDVAVGLSEELPFT
HHHHHHHCCCCCHHHHHHHHEECHHHHHHHHCEEEEECCCCCCCCCCCEEEECCCCCCCC
PEEYSQTLDVLLSNFLLIGQTVIKTLKSVYTRWQRIRQSMLMLDREIFGESIEDIEDQLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DLHLADFVYRMDYSHWQQYPRYLEALEIRIDRLEHNVEADLDGVYALDLHMERLAGRAND
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCC
KAISDYRWMVEEYRIQLFAQPMKTRMAVSPKRLSKIWDKMS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]