| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is arsR [C]
Identifier: 93006212
GI number: 93006212
Start: 1695866
End: 1696189
Strand: Direct
Name: arsR [C]
Synonym: Pcryo_1386
Alternate gene names: 93006212
Gene position: 1695866-1696189 (Clockwise)
Preceding gene: 93006208
Following gene: 93006218
Centisome position: 55.42
GC content: 38.89
Gene sequence:
>324_bases ATGTCTAATAATAATTCTATGATACAACCACTTGAGTTGTTTAAAGTATTATCTGACCCTACGCGCTTGAAGATTTTCCA AATCCTATATAATAAAGAATCACGCTGCGTCGGTGAGTTAGTAGAGATACTTGATCAACCACAGCCAACGATATCCCGCC ATCTCAATCATTTAAAAAAACTGGGCATCCTAAATTGTGTTCGTGATGGAACTTGGATGTGGTACGAGGTCGCAAATGAC TTGCCAGAATGGTGTCAAGACATCTTGGACACTACCTATAAGCAGATATCAATCAAAGAAAGAGCCATGCTAAAACTAGC CTAA
Upstream 100 bases:
>100_bases ATGGCGACGAACTGTAAATTTGCTCATTTTTTAATCGATTTTAAGGATAACTGCTGTTATATTGTCCTCCTATTAACTAA ATATACATTGGAATTGACCC
Downstream 100 bases:
>100_bases TGCTAATAGGCAGTGAAAATTTTGCTTAGATAACTTTGGCTTATATTAGCCGCATAAAAAAGACCTCATGATGAGGTCTT TTTTATGTGCTATCGCTAGC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSNNNSMIQPLELFKVLSDPTRLKIFQILYNKESRCVGELVEILDQPQPTISRHLNHLKKLGILNCVRDGTWMWYEVAND LPEWCQDILDTTYKQISIKERAMLKLA
Sequences:
>Translated_107_residues MSNNNSMIQPLELFKVLSDPTRLKIFQILYNKESRCVGELVEILDQPQPTISRHLNHLKKLGILNCVRDGTWMWYEVAND LPEWCQDILDTTYKQISIKERAMLKLA >Mature_106_residues SNNNSMIQPLELFKVLSDPTRLKIFQILYNKESRCVGELVEILDQPQPTISRHLNHLKKLGILNCVRDGTWMWYEVANDL PEWCQDILDTTYKQISIKERAMLKLA
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=100, Percent_Identity=37, Blast_Score=72, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 12547; Mature: 12416
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNNSMIQPLELFKVLSDPTRLKIFQILYNKESRCVGELVEILDQPQPTISRHLNHLKK CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LGILNCVRDGTWMWYEVANDLPEWCQDILDTTYKQISIKERAMLKLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNNNSMIQPLELFKVLSDPTRLKIFQILYNKESRCVGELVEILDQPQPTISRHLNHLKK CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH LGILNCVRDGTWMWYEVANDLPEWCQDILDTTYKQISIKERAMLKLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]