| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006199
Identifier: 93006199
GI number: 93006199
Start: 1681171
End: 1682181
Strand: Reverse
Name: 93006199
Synonym: Pcryo_1373
Alternate gene names: NA
Gene position: 1682181-1681171 (Counterclockwise)
Preceding gene: 93006200
Following gene: 93006198
Centisome position: 54.98
GC content: 44.02
Gene sequence:
>1011_bases ATGACTGATGCTACGAATGCTAAAACAGCAAAAGTAGAGATTTATGAAAGCGCCGATGGAAAGGCGCAGATAGAGATACG TTTAGAGCACGATACTCTATGGCTCTCGCAAGCCCAATTGGCGACGCTGTTTGAAAAAGACTCTGATACCATAGGATTGC ATCTAAAGAATATTTATAAAGAAGGTGAGTTAGACCTAGAAGCAACTACCGAGCAATCCTCGGTAGTTCGTCAAGAGGGA AATCGACAGGTTCGACGTAACATTCGCTTTTACAATCTAGATGCTATTATTTCTGTGGGTTATCGGGTTAATTCCAAAAA AGGTACTCAGTTCCGTATATGGGCAACCCAGCGCTTACGTGAATACTTGGTCCAAGGCTATACGCTCAACCAAGAGCGCT TTGATAAAAACTCAAGCGAGCTACAACAAGCATTAAATTTAATCAAAAAGACTGCGCAAAGTCCCGAGCTTAAAACCGAT GAAGGACGCGGTTTGGTTGAAATTATCAGTCGTTATACACAGACATTCTTATGGTTACAGCGCTATGATGAAGGTTTGCT TGATAATCCCGCAGGGCAAGAGGGCGGCATCTTACCCAGTCCGACTGAGGCAATGGCAGCGCTGACGGATTTGAAAGCGC AGCTGATAGCAAGGGGCGAGGCGACTGAATTATTCGCCAAACCTCGTGGTGATGGTTTGGACAGTGTACTGGGTAATTTA GAGCAGACGGTGTTTGGCGAGCCTGCATACCCGACCATCGAGAGTAAAGCGGCGCATTTACTGTACTTTATGGTCAAAAA CCATCCTTTTACCGATGGTAATAAACGCAGCGGCGCTTTTTTGTTTGTAGATTTTCTGCATCGGAATAATCGACTGCTCA ATGATAAAGGTGACATGGTTATTAATAACACCGGGCTTGCCGCATTAACCTTGTTGGTTGCCGAGTCTGACCCCAACCAA AAAGAAACCTTGATTAAATTGATTATGAATATGCTGTCATTAGAATCTTGA
Upstream 100 bases:
>100_bases CCAAGTACAGGATAGTCATTGTTATGTACTCTGTCACGTAGTCGCTGTATGATTTATGAATTGAGCATAAGCGCGTATAT TAAGTTAAGGAAAAACCAAG
Downstream 100 bases:
>100_bases TAAATAGGCTTATTGTCAGCATCACTTAACCCCTTAAAAACACATAACGCCAACAATAAAAAGCACATTCTAACGACAAA ATTAAAGGAACTTCAATATG
Product: death-on-curing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTDATNAKTAKVEIYESADGKAQIEIRLEHDTLWLSQAQLATLFEKDSDTIGLHLKNIYKEGELDLEATTEQSSVVRQEG NRQVRRNIRFYNLDAIISVGYRVNSKKGTQFRIWATQRLREYLVQGYTLNQERFDKNSSELQQALNLIKKTAQSPELKTD EGRGLVEIISRYTQTFLWLQRYDEGLLDNPAGQEGGILPSPTEAMAALTDLKAQLIARGEATELFAKPRGDGLDSVLGNL EQTVFGEPAYPTIESKAAHLLYFMVKNHPFTDGNKRSGAFLFVDFLHRNNRLLNDKGDMVINNTGLAALTLLVAESDPNQ KETLIKLIMNMLSLES
Sequences:
>Translated_336_residues MTDATNAKTAKVEIYESADGKAQIEIRLEHDTLWLSQAQLATLFEKDSDTIGLHLKNIYKEGELDLEATTEQSSVVRQEG NRQVRRNIRFYNLDAIISVGYRVNSKKGTQFRIWATQRLREYLVQGYTLNQERFDKNSSELQQALNLIKKTAQSPELKTD EGRGLVEIISRYTQTFLWLQRYDEGLLDNPAGQEGGILPSPTEAMAALTDLKAQLIARGEATELFAKPRGDGLDSVLGNL EQTVFGEPAYPTIESKAAHLLYFMVKNHPFTDGNKRSGAFLFVDFLHRNNRLLNDKGDMVINNTGLAALTLLVAESDPNQ KETLIKLIMNMLSLES >Mature_335_residues TDATNAKTAKVEIYESADGKAQIEIRLEHDTLWLSQAQLATLFEKDSDTIGLHLKNIYKEGELDLEATTEQSSVVRQEGN RQVRRNIRFYNLDAIISVGYRVNSKKGTQFRIWATQRLREYLVQGYTLNQERFDKNSSELQQALNLIKKTAQSPELKTDE GRGLVEIISRYTQTFLWLQRYDEGLLDNPAGQEGGILPSPTEAMAALTDLKAQLIARGEATELFAKPRGDGLDSVLGNLE QTVFGEPAYPTIESKAAHLLYFMVKNHPFTDGNKRSGAFLFVDFLHRNNRLLNDKGDMVINNTGLAALTLLVAESDPNQK ETLIKLIMNMLSLES
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37814; Mature: 37683
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATNAKTAKVEIYESADGKAQIEIRLEHDTLWLSQAQLATLFEKDSDTIGLHLKNIYK CCCCCCCCEEEEEEEECCCCEEEEEEEEECCEEEHHHHHHHHHHHCCCCEEEEHHHHHHC EGELDLEATTEQSSVVRQEGNRQVRRNIRFYNLDAIISVGYRVNSKKGTQFRIWATQRLR CCCCCEEECCHHHHHHHHHCCHHHHHCCCEEEEHEEEEECEEECCCCCCEEEEEHHHHHH EYLVQGYTLNQERFDKNSSELQQALNLIKKTAQSPELKTDEGRGLVEIISRYTQTFLWLQ HHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RYDEGLLDNPAGQEGGILPSPTEAMAALTDLKAQLIARGEATELFAKPRGDGLDSVLGNL HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH EQTVFGEPAYPTIESKAAHLLYFMVKNHPFTDGNKRSGAFLFVDFLHRNNRLLNDKGDMV HHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCEEECCCCCEE INNTGLAALTLLVAESDPNQKETLIKLIMNMLSLES EECCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDATNAKTAKVEIYESADGKAQIEIRLEHDTLWLSQAQLATLFEKDSDTIGLHLKNIYK CCCCCCCEEEEEEEECCCCEEEEEEEEECCEEEHHHHHHHHHHHCCCCEEEEHHHHHHC EGELDLEATTEQSSVVRQEGNRQVRRNIRFYNLDAIISVGYRVNSKKGTQFRIWATQRLR CCCCCEEECCHHHHHHHHHCCHHHHHCCCEEEEHEEEEECEEECCCCCCEEEEEHHHHHH EYLVQGYTLNQERFDKNSSELQQALNLIKKTAQSPELKTDEGRGLVEIISRYTQTFLWLQ HHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RYDEGLLDNPAGQEGGILPSPTEAMAALTDLKAQLIARGEATELFAKPRGDGLDSVLGNL HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH EQTVFGEPAYPTIESKAAHLLYFMVKNHPFTDGNKRSGAFLFVDFLHRNNRLLNDKGDMV HHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCEEECCCCCEE INNTGLAALTLLVAESDPNQKETLIKLIMNMLSLES EECCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA