Click here to switch to the map view.

The map label for this gene is 93006194

Identifier: 93006194

GI number: 93006194

Start: 1675579

End: 1677159

Strand: Reverse

Name: 93006194

Synonym: Pcryo_1368

Alternate gene names: NA

Gene position: 1677159-1675579 (Counterclockwise)

Preceding gene: 93006195

Following gene: 93006193

Centisome position: 54.81

GC content: 34.22

Gene sequence:

>1581_bases
ATGACTATTAATAGGACTGTTTACACTAATATTAAATTTGACCCTAGAAATACATTTACACCTCAGCAAATTACAGTTAT
TAAAAAATTAAATATACCCACTGCCCTATTATTTAAAACGGCATCTGAGTTTGATGATAAATATATAAATACAAAAAAAG
ATAAATGGACGTTTACTTTTTCTGGTCAAAAAGCCTCGGTTCAGTTCATAGGTGGTAAACATGAGGTTTTGCTAAAAAAA
TATATACTAGCTTGTTTCGTAAGTAAGAACTCACCAATAGGCCTGAGTCATCTTAATAATATTTTAACCTTATTTTTCTC
GTTTAACATAAAGTCAAGCTCCATATCCTATTCAAAATCTATGGATTTTATGAAGAGAACTACTAACAGTAGAGAGTTTT
ACTTTTTCTTATTCTTTATTAAAACTCTTTGTAGAATTGATTTTCCGGAGTTCGATATTGATAATCTAGAAGATCTAGAG
TTTATACCGAGACCAATTAATAACTCATGGAGTAATTATCAAAATATTGATGCAGTTCTAAAAGATCATGATAAAAACCT
TATAATTAAAGGCATACATGAATTATCTTTTCGTATTACAAGTAATAGCTCAGATAAAGTGCCAATTGGTGAATTACAAG
ACAGTGCTGTATTAGGCCTATGTTATGTTTGTGGTATCCGACCTGTACAGTTAGCTAGACTAGCCGTCGGAGACATTAAT
TTAGACTCCAAATCAAAAAGAAGCAACCTAATGCGTTACAGCATAGCGATACCTTATGCAAAACAGCAAAAACTCATACT
TGATAAGATCCTAATTGCCATTCCACCTGAGTTAGCCAGAATTATGTTGGAATATGAACTTAGGACTCAGAGAAATAAAG
GAGACCAGTTGTTCAATATTGGTAGCAATGCCATTATATTTGTTAATGAAGCTATTAACAGACAAATGGTGAGGTTCGCA
CCTCTGGAAACTCGTAAAGCTATTGAAAGTAATAATATGGTACAGCCTCATTACACCTCTTCTGATTTCCGTCACAATGT
AGGACACTCTTTGGCAATGACAGGAGCAAGTGCAGAAGAAGTTGCTCATATAATGGGACACAACTCTTTAGTGGCCGCTA
AGCATTATATTTTGGCAACACCAGAACTAGCTTTAGTTCGAGAAAAATCTTTAGGGAATAACCCTGTATGGCAAAATATG
ATCTCAATGCTATTAACTGGTGCCATTGTCTCAAAATCTGAATGGCAAGGTAATCAGGTTAGTGGGATTGTGCACAATAC
CCTTTACTCAGAACTAGGCGGTTGTAATCGTTCATATGATGAATGCCCCTTCTCTGAAGTTCGATCATGTTACGGGTGTT
TATATTTTAACCCCTTCAAAGAAGGTAATCATAATTCAGTATTGCAAAGTGTAGAAAGAGAGCATCTTGACTTAATAGAG
TTATCTGACTCAGTCGGTAACTCTAAAAATCCGTTAATTCAAGTATATGAAGCAACTAGCCAAGAAATTAAATCAGTTAT
CGCACGATGTAAAAGCATTGCAATAAATCCAAATGCTATTACGTTAACTAATGTGGAGTGA

Upstream 100 bases:

>100_bases
AAACGATTTATTTCCGAAAATGCTAATAAGGAAAACTTAAGAAGAATCCATACATTAAACAACACAATTGAATCAGATTT
TTATTTTGAGGATACGTCAA

Downstream 100 bases:

>100_bases
TATAAATGGATAATATTTTTCAGAACTACGCTTCTTTTATTAGTGAGCAGAAAACTTTTTTTGAATCAAACCTCTCTAAA
GATTTCCATCATAATTGGGA

Product: phage integrase

Products: NA

Alternate protein names: Integrase Family Protein; Phage-Type Integrase

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTINRTVYTNIKFDPRNTFTPQQITVIKKLNIPTALLFKTASEFDDKYINTKKDKWTFTFSGQKASVQFIGGKHEVLLKK
YILACFVSKNSPIGLSHLNNILTLFFSFNIKSSSISYSKSMDFMKRTTNSREFYFFLFFIKTLCRIDFPEFDIDNLEDLE
FIPRPINNSWSNYQNIDAVLKDHDKNLIIKGIHELSFRITSNSSDKVPIGELQDSAVLGLCYVCGIRPVQLARLAVGDIN
LDSKSKRSNLMRYSIAIPYAKQQKLILDKILIAIPPELARIMLEYELRTQRNKGDQLFNIGSNAIIFVNEAINRQMVRFA
PLETRKAIESNNMVQPHYTSSDFRHNVGHSLAMTGASAEEVAHIMGHNSLVAAKHYILATPELALVREKSLGNNPVWQNM
ISMLLTGAIVSKSEWQGNQVSGIVHNTLYSELGGCNRSYDECPFSEVRSCYGCLYFNPFKEGNHNSVLQSVEREHLDLIE
LSDSVGNSKNPLIQVYEATSQEIKSVIARCKSIAINPNAITLTNVE

Sequences:

>Translated_526_residues
MTINRTVYTNIKFDPRNTFTPQQITVIKKLNIPTALLFKTASEFDDKYINTKKDKWTFTFSGQKASVQFIGGKHEVLLKK
YILACFVSKNSPIGLSHLNNILTLFFSFNIKSSSISYSKSMDFMKRTTNSREFYFFLFFIKTLCRIDFPEFDIDNLEDLE
FIPRPINNSWSNYQNIDAVLKDHDKNLIIKGIHELSFRITSNSSDKVPIGELQDSAVLGLCYVCGIRPVQLARLAVGDIN
LDSKSKRSNLMRYSIAIPYAKQQKLILDKILIAIPPELARIMLEYELRTQRNKGDQLFNIGSNAIIFVNEAINRQMVRFA
PLETRKAIESNNMVQPHYTSSDFRHNVGHSLAMTGASAEEVAHIMGHNSLVAAKHYILATPELALVREKSLGNNPVWQNM
ISMLLTGAIVSKSEWQGNQVSGIVHNTLYSELGGCNRSYDECPFSEVRSCYGCLYFNPFKEGNHNSVLQSVEREHLDLIE
LSDSVGNSKNPLIQVYEATSQEIKSVIARCKSIAINPNAITLTNVE
>Mature_525_residues
TINRTVYTNIKFDPRNTFTPQQITVIKKLNIPTALLFKTASEFDDKYINTKKDKWTFTFSGQKASVQFIGGKHEVLLKKY
ILACFVSKNSPIGLSHLNNILTLFFSFNIKSSSISYSKSMDFMKRTTNSREFYFFLFFIKTLCRIDFPEFDIDNLEDLEF
IPRPINNSWSNYQNIDAVLKDHDKNLIIKGIHELSFRITSNSSDKVPIGELQDSAVLGLCYVCGIRPVQLARLAVGDINL
DSKSKRSNLMRYSIAIPYAKQQKLILDKILIAIPPELARIMLEYELRTQRNKGDQLFNIGSNAIIFVNEAINRQMVRFAP
LETRKAIESNNMVQPHYTSSDFRHNVGHSLAMTGASAEEVAHIMGHNSLVAAKHYILATPELALVREKSLGNNPVWQNMI
SMLLTGAIVSKSEWQGNQVSGIVHNTLYSELGGCNRSYDECPFSEVRSCYGCLYFNPFKEGNHNSVLQSVEREHLDLIEL
SDSVGNSKNPLIQVYEATSQEIKSVIARCKSIAINPNAITLTNVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59570; Mature: 59439

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINRTVYTNIKFDPRNTFTPQQITVIKKLNIPTALLFKTASEFDDKYINTKKDKWTFTF
CCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
SGQKASVQFIGGKHEVLLKKYILACFVSKNSPIGLSHLNNILTLFFSFNIKSSSISYSKS
CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCCCCHHHH
MDFMKRTTNSREFYFFLFFIKTLCRIDFPEFDIDNLEDLEFIPRPINNSWSNYQNIDAVL
HHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
KDHDKNLIIKGIHELSFRITSNSSDKVPIGELQDSAVLGLCYVCGIRPVQLARLAVGDIN
HCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCC
LDSKSKRSNLMRYSIAIPYAKQQKLILDKILIAIPPELARIMLEYELRTQRNKGDQLFNI
CCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEC
GSNAIIFVNEAINRQMVRFAPLETRKAIESNNMVQPHYTSSDFRHNVGHSLAMTGASAEE
CCCEEEEEECHHCCHHHEECCCHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHH
VAHIMGHNSLVAAKHYILATPELALVREKSLGNNPVWQNMISMLLTGAIVSKSEWQGNQV
HHHHHCCCCEEEECEEEEECCCHHEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
SGIVHNTLYSELGGCNRSYDECPFSEVRSCYGCLYFNPFKEGNHNSVLQSVEREHLDLIE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCHHEE
LSDSVGNSKNPLIQVYEATSQEIKSVIARCKSIAINPNAITLTNVE
EHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHEEECCCEEEEECCC
>Mature Secondary Structure 
TINRTVYTNIKFDPRNTFTPQQITVIKKLNIPTALLFKTASEFDDKYINTKKDKWTFTF
CCCCEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
SGQKASVQFIGGKHEVLLKKYILACFVSKNSPIGLSHLNNILTLFFSFNIKSSSISYSKS
CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCCCCHHHH
MDFMKRTTNSREFYFFLFFIKTLCRIDFPEFDIDNLEDLEFIPRPINNSWSNYQNIDAVL
HHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
KDHDKNLIIKGIHELSFRITSNSSDKVPIGELQDSAVLGLCYVCGIRPVQLARLAVGDIN
HCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCC
LDSKSKRSNLMRYSIAIPYAKQQKLILDKILIAIPPELARIMLEYELRTQRNKGDQLFNI
CCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEC
GSNAIIFVNEAINRQMVRFAPLETRKAIESNNMVQPHYTSSDFRHNVGHSLAMTGASAEE
CCCEEEEEECHHCCHHHEECCCHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHH
VAHIMGHNSLVAAKHYILATPELALVREKSLGNNPVWQNMISMLLTGAIVSKSEWQGNQV
HHHHHCCCCEEEECEEEEECCCHHEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
SGIVHNTLYSELGGCNRSYDECPFSEVRSCYGCLYFNPFKEGNHNSVLQSVEREHLDLIE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCHHEE
LSDSVGNSKNPLIQVYEATSQEIKSVIARCKSIAINPNAITLTNVE
EHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA