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The map label for this gene is 93006189

Identifier: 93006189

GI number: 93006189

Start: 1668950

End: 1671577

Strand: Direct

Name: 93006189

Synonym: Pcryo_1363

Alternate gene names: NA

Gene position: 1668950-1671577 (Clockwise)

Preceding gene: 93006188

Following gene: 93006197

Centisome position: 54.54

GC content: 33.11

Gene sequence:

>2628_bases
ATGCTTAAAAACGAATACTTACGCTTTATGAACACTATAAAACTAACTGCAGCGCCAAATGTATCAAAGATGGCTAATTT
AATTCTCGCTAATTTTGATGAGTTGGCGTTATTGGGCACGCATCAAGGTCAGCGAGTAAGAAAAATAGTAGAGCTAACAG
TTACAAGCTGGAATCAGTTATCCGATGAAATCTCACAATCACCAAAAGGTAGTTCTAAAGCTAATCCACTTATAAAGAGA
ATAGTTTCTGTAGAAGTGGGTCCATTTCGGGGTTTTGCTAAAGAAGAGGTATTGATTCTTGATAGCAATATAGTTCTTAT
ATACGGTCCTAATGGGACTGGGAAAACGAGTTTCTGCGAAGCATTAGAATATGGGTTACTTGGAAGTGTTGCTGAGGCTG
ATAACAAGAGATTTAAAAATCAAGATAAATACTTTGAAAATGCCCATACAGAAAGCTTTACTCGTCCCATTCTTTTAGGT
CGTAATGATCAAGACGAAGAAATAGAAATAGAATTTGACCAAGAGCTTTACCAGTTTTGTTTTATTGAAAGAAATCGTAT
TGATAGCTTCTCACGTATAGCAGCTCAGCTACCAGCTAAGCAAACAGAGCTTACCTCAACCTTATTTGGTCTTGATGCAT
TTAACGATTTTGTAAAAGGTTTTTCATTAGCAATTGATCAGAAATATATAGACTTGGTTGGGAAAAAAGCAGAGGAATTG
AGAGTTAAAGAGCGAGAAACTGACATTCATGTTAGAAATAGACATCAGTATCTGGCTGATCTACAAAAAATAAAAGAAGA
TGAGAATAGCCTAGCTAGAACATATAAAGACGGTTATACCTTTTTGCAGATGGATGATGAGCTTAATGGAAAACAGGGTA
GTAGTGGGGAAATAAGTCGTATCGAAGCAGAGCTTCAAAAGCCTATAACATCTAAATCTAACCTGAACCTAGACTCTATG
AATAGCGTTCGACGAGAAATTAGAAATGCTTACTCTAGAATTATGATAAATAATCAGGAGTTAATAGACAACTCAACACA
AATTTCATATAAAAGGTTGTATGAATCAGTACGTGTATTGCAAGATGAAAGCGCTGATAAGTGTCCTGCTTGTGAGACTC
CAATAAATTTATCGACTAGAAATCCCTTTGCTAATGCCATTCTAGAGCTAGAAAAATTAGAGCACCTTGCCAGAATTCAA
GATGAAATACATCTTGAAAAAAAGACACTTAGCGATTCACTAGTAAAGTTAAATAGTATTATTACAGTTTGTGATAACTA
TTCCGATAATGATTTTTTAAAAGAATATTTAAAGGAAAATTCTTCAGAATTAGATATTGAATGGTTTCATAGCTTAGAAA
ATTCCAACTCTAGTGCTCATGCACCAATAGTCTTAATAGAAAGAATAATAAAGAATCAAATGTTAGAAGATTCAAAGATC
ACTCAGAAATTAGAAGAAAAACGAATAAATAACAACGGTTTAGAGAAAATAAGGGCTATATCCAATCAAATAATAAAACT
TAAAGTGAATAAAGAAAATATTAATGAGCAACTAAAAAAAGCTGATGATTTTATAGCTAAATTTGAAAAAGATAATGCTG
AATTAATCGAAGATGTTAACTCAGAAAAAGAAGTGATAGCTAATAATATTCTGATTGCTGAATCTTACAACTTATTGATT
ATATCTCTAAATGATTATAAGAATAACTTACCTATTGATTTAGTTGCAGATTTGGGTGACATGACTACTAAATTATATAA
TGCCTTTAATAGATACGATCAGCCTGAGGAGATGATCGGGAGGATAGATTTACCACTTGCACAAGATGAAAAATTATTAA
TATCTTTCCAAACAACACCTGCTAAGAAACATGATGCATTACATGTACTAAGCGAAGGACATATTAGGTGTTTAGGTTTA
GCCATCTTACTCGCAAAAAATATTAAAAATAATTGCCCTTTGATTATATTTGATGATCCTGTAAATTCTATAGATGATGA
ACATCGGAAGGCTATTCGTGAGACATTATTTAAAGATAGTTTTTTCAAAGATAAACAAGTTATTTTAGCGTGCCATGGCG
AAGAGTTTTTCAAAGATATACATCAGACTATTGGAAAAAAAGCTGCAGAAGAAACTGAATCATATATTTTCTTACGTCAA
AAAGGTGAAAATCATATACAAGTCACCTCTAAACATCGTCCTAAAAATTATATTCTAGCAGCATCGGAGTTATACTTTAA
TGGTGAGTATAAGGATGCCTTAATGTCATCGCGTCGTGCTTTGGAATACTTATGTGACAAAGCATGGTGGCACTACAGCA
ACAATTGTCATATAAGGGATCCGGCTATCAGTGTCGTTAGACGAAACCCTAAAGCACCTTGGGATTTAAACGCATTAGCT
GCAAATATATGTTCTAAAATTAAAAAAGCTAAAGTAGATGTTCCAAATAAAGATGAAATAATTATAAGTCTCGACTTACT
GCTTGGTCTGGGTAAGGATGAAGGTGGTTTACATTGGGCTTATCTAAACAAAGGTACTCATGAAGAAGAGGATCGTGAAG
AATTTGATCACATTACTGTAAAAGAAATAATTGAATCATTAGAAAGAATAGATTCCTCTTTACTGTAG

Upstream 100 bases:

>100_bases
TTCAGGATATTAATGTTTTATTTGCTGCTAGAACTACTTTTATTATGTAATCATTTGCATATAAGTTTAAATCAGGATGA
TTCTGATTAAGAGGGAAATT

Downstream 100 bases:

>100_bases
TAATGATAGTATGTTGAAAGCTAAGTATATTCTTGAGATCATCCCAGATTCTGTGTAACTGCCGTTTAGATTAAATGCTT
ACTGATACGGTCATCAAACA

Product: SMC protein-like protein

Products: NA

Alternate protein names: SMC Protein-Like; SMC Domain Protein

Number of amino acids: Translated: 875; Mature: 875

Protein sequence:

>875_residues
MLKNEYLRFMNTIKLTAAPNVSKMANLILANFDELALLGTHQGQRVRKIVELTVTSWNQLSDEISQSPKGSSKANPLIKR
IVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCEALEYGLLGSVAEADNKRFKNQDKYFENAHTESFTRPILLG
RNDQDEEIEIEFDQELYQFCFIERNRIDSFSRIAAQLPAKQTELTSTLFGLDAFNDFVKGFSLAIDQKYIDLVGKKAEEL
RVKERETDIHVRNRHQYLADLQKIKEDENSLARTYKDGYTFLQMDDELNGKQGSSGEISRIEAELQKPITSKSNLNLDSM
NSVRREIRNAYSRIMINNQELIDNSTQISYKRLYESVRVLQDESADKCPACETPINLSTRNPFANAILELEKLEHLARIQ
DEIHLEKKTLSDSLVKLNSIITVCDNYSDNDFLKEYLKENSSELDIEWFHSLENSNSSAHAPIVLIERIIKNQMLEDSKI
TQKLEEKRINNNGLEKIRAISNQIIKLKVNKENINEQLKKADDFIAKFEKDNAELIEDVNSEKEVIANNILIAESYNLLI
ISLNDYKNNLPIDLVADLGDMTTKLYNAFNRYDQPEEMIGRIDLPLAQDEKLLISFQTTPAKKHDALHVLSEGHIRCLGL
AILLAKNIKNNCPLIIFDDPVNSIDDEHRKAIRETLFKDSFFKDKQVILACHGEEFFKDIHQTIGKKAAEETESYIFLRQ
KGENHIQVTSKHRPKNYILAASELYFNGEYKDALMSSRRALEYLCDKAWWHYSNNCHIRDPAISVVRRNPKAPWDLNALA
ANICSKIKKAKVDVPNKDEIIISLDLLLGLGKDEGGLHWAYLNKGTHEEEDREEFDHITVKEIIESLERIDSSLL

Sequences:

>Translated_875_residues
MLKNEYLRFMNTIKLTAAPNVSKMANLILANFDELALLGTHQGQRVRKIVELTVTSWNQLSDEISQSPKGSSKANPLIKR
IVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCEALEYGLLGSVAEADNKRFKNQDKYFENAHTESFTRPILLG
RNDQDEEIEIEFDQELYQFCFIERNRIDSFSRIAAQLPAKQTELTSTLFGLDAFNDFVKGFSLAIDQKYIDLVGKKAEEL
RVKERETDIHVRNRHQYLADLQKIKEDENSLARTYKDGYTFLQMDDELNGKQGSSGEISRIEAELQKPITSKSNLNLDSM
NSVRREIRNAYSRIMINNQELIDNSTQISYKRLYESVRVLQDESADKCPACETPINLSTRNPFANAILELEKLEHLARIQ
DEIHLEKKTLSDSLVKLNSIITVCDNYSDNDFLKEYLKENSSELDIEWFHSLENSNSSAHAPIVLIERIIKNQMLEDSKI
TQKLEEKRINNNGLEKIRAISNQIIKLKVNKENINEQLKKADDFIAKFEKDNAELIEDVNSEKEVIANNILIAESYNLLI
ISLNDYKNNLPIDLVADLGDMTTKLYNAFNRYDQPEEMIGRIDLPLAQDEKLLISFQTTPAKKHDALHVLSEGHIRCLGL
AILLAKNIKNNCPLIIFDDPVNSIDDEHRKAIRETLFKDSFFKDKQVILACHGEEFFKDIHQTIGKKAAEETESYIFLRQ
KGENHIQVTSKHRPKNYILAASELYFNGEYKDALMSSRRALEYLCDKAWWHYSNNCHIRDPAISVVRRNPKAPWDLNALA
ANICSKIKKAKVDVPNKDEIIISLDLLLGLGKDEGGLHWAYLNKGTHEEEDREEFDHITVKEIIESLERIDSSLL
>Mature_875_residues
MLKNEYLRFMNTIKLTAAPNVSKMANLILANFDELALLGTHQGQRVRKIVELTVTSWNQLSDEISQSPKGSSKANPLIKR
IVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCEALEYGLLGSVAEADNKRFKNQDKYFENAHTESFTRPILLG
RNDQDEEIEIEFDQELYQFCFIERNRIDSFSRIAAQLPAKQTELTSTLFGLDAFNDFVKGFSLAIDQKYIDLVGKKAEEL
RVKERETDIHVRNRHQYLADLQKIKEDENSLARTYKDGYTFLQMDDELNGKQGSSGEISRIEAELQKPITSKSNLNLDSM
NSVRREIRNAYSRIMINNQELIDNSTQISYKRLYESVRVLQDESADKCPACETPINLSTRNPFANAILELEKLEHLARIQ
DEIHLEKKTLSDSLVKLNSIITVCDNYSDNDFLKEYLKENSSELDIEWFHSLENSNSSAHAPIVLIERIIKNQMLEDSKI
TQKLEEKRINNNGLEKIRAISNQIIKLKVNKENINEQLKKADDFIAKFEKDNAELIEDVNSEKEVIANNILIAESYNLLI
ISLNDYKNNLPIDLVADLGDMTTKLYNAFNRYDQPEEMIGRIDLPLAQDEKLLISFQTTPAKKHDALHVLSEGHIRCLGL
AILLAKNIKNNCPLIIFDDPVNSIDDEHRKAIRETLFKDSFFKDKQVILACHGEEFFKDIHQTIGKKAAEETESYIFLRQ
KGENHIQVTSKHRPKNYILAASELYFNGEYKDALMSSRRALEYLCDKAWWHYSNNCHIRDPAISVVRRNPKAPWDLNALA
ANICSKIKKAKVDVPNKDEIIISLDLLLGLGKDEGGLHWAYLNKGTHEEEDREEFDHITVKEIIESLERIDSSLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100270; Mature: 100270

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNEYLRFMNTIKLTAAPNVSKMANLILANFDELALLGTHQGQRVRKIVELTVTSWNQL
CCCHHHHHHHHHEEEECCCCHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
SDEISQSPKGSSKANPLIKRIVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCE
HHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHH
ALEYGLLGSVAEADNKRFKNQDKYFENAHTESFTRPILLGRNDQDEEIEIEFDQELYQFC
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHCCCCEEECCCCCCCEEEEEEHHHHHHHH
FIERNRIDSFSRIAAQLPAKQTELTSTLFGLDAFNDFVKGFSLAIDQKYIDLVGKKAEEL
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RVKERETDIHVRNRHQYLADLQKIKEDENSLARTYKDGYTFLQMDDELNGKQGSSGEISR
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
IEAELQKPITSKSNLNLDSMNSVRREIRNAYSRIMINNQELIDNSTQISYKRLYESVRVL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHCCCCHHHHHHHHHHHHHH
QDESADKCPACETPINLSTRNPFANAILELEKLEHLARIQDEIHLEKKTLSDSLVKLNSI
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITVCDNYSDNDFLKEYLKENSSELDIEWFHSLENSNSSAHAPIVLIERIIKNQMLEDSKI
HHEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHH
TQKLEEKRINNNGLEKIRAISNQIIKLKVNKENINEQLKKADDFIAKFEKDNAELIEDVN
HHHHHHHHCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
SEKEVIANNILIAESYNLLIISLNDYKNNLPIDLVADLGDMTTKLYNAFNRYDQPEEMIG
CHHHHHHHCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
RIDLPLAQDEKLLISFQTTPAKKHDALHVLSEGHIRCLGLAILLAKNIKNNCPLIIFDDP
CCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
VNSIDDEHRKAIRETLFKDSFFKDKQVILACHGEEFFKDIHQTIGKKAAEETESYIFLRQ
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEE
KGENHIQVTSKHRPKNYILAASELYFNGEYKDALMSSRRALEYLCDKAWWHYSNNCHIRD
CCCCEEEEECCCCCCCEEEEEHHEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEC
PAISVVRRNPKAPWDLNALAANICSKIKKAKVDVPNKDEIIISLDLLLGLGKDEGGLHWA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCEEEE
YLNKGTHEEEDREEFDHITVKEIIESLERIDSSLL
EECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNEYLRFMNTIKLTAAPNVSKMANLILANFDELALLGTHQGQRVRKIVELTVTSWNQL
CCCHHHHHHHHHEEEECCCCHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
SDEISQSPKGSSKANPLIKRIVSVEVGPFRGFAKEEVLILDSNIVLIYGPNGTGKTSFCE
HHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCHHHHH
ALEYGLLGSVAEADNKRFKNQDKYFENAHTESFTRPILLGRNDQDEEIEIEFDQELYQFC
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHCCCCEEECCCCCCCEEEEEEHHHHHHHH
FIERNRIDSFSRIAAQLPAKQTELTSTLFGLDAFNDFVKGFSLAIDQKYIDLVGKKAEEL
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RVKERETDIHVRNRHQYLADLQKIKEDENSLARTYKDGYTFLQMDDELNGKQGSSGEISR
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
IEAELQKPITSKSNLNLDSMNSVRREIRNAYSRIMINNQELIDNSTQISYKRLYESVRVL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHHCCCCHHHHHHHHHHHHHH
QDESADKCPACETPINLSTRNPFANAILELEKLEHLARIQDEIHLEKKTLSDSLVKLNSI
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITVCDNYSDNDFLKEYLKENSSELDIEWFHSLENSNSSAHAPIVLIERIIKNQMLEDSKI
HHEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHH
TQKLEEKRINNNGLEKIRAISNQIIKLKVNKENINEQLKKADDFIAKFEKDNAELIEDVN
HHHHHHHHCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
SEKEVIANNILIAESYNLLIISLNDYKNNLPIDLVADLGDMTTKLYNAFNRYDQPEEMIG
CHHHHHHHCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
RIDLPLAQDEKLLISFQTTPAKKHDALHVLSEGHIRCLGLAILLAKNIKNNCPLIIFDDP
CCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCC
VNSIDDEHRKAIRETLFKDSFFKDKQVILACHGEEFFKDIHQTIGKKAAEETESYIFLRQ
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEE
KGENHIQVTSKHRPKNYILAASELYFNGEYKDALMSSRRALEYLCDKAWWHYSNNCHIRD
CCCCEEEEECCCCCCCEEEEEHHEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEC
PAISVVRRNPKAPWDLNALAANICSKIKKAKVDVPNKDEIIISLDLLLGLGKDEGGLHWA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCCCEEEE
YLNKGTHEEEDREEFDHITVKEIIESLERIDSSLL
EECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA