Click here to switch to the map view.

The map label for this gene is yaiN [C]

Identifier: 93006168

GI number: 93006168

Start: 1640038

End: 1640322

Strand: Reverse

Name: yaiN [C]

Synonym: Pcryo_1340

Alternate gene names: 93006168

Gene position: 1640322-1640038 (Counterclockwise)

Preceding gene: 93006170

Following gene: 93006167

Centisome position: 53.61

GC content: 40.0

Gene sequence:

>285_bases
ATGTCACATACTCAAAAAAGTAAGAGCAAGCTACTAGGACGTATCAGACGTATCAGACGTATCAAAGGTCAGTCAGTAGC
AATAGAAGCTTCATTAGAAGGCGATCCTGAATGCATGGCTCTTTTGCAGCAAATAGCGGCATTAAAGGGGGCGGTAAACG
GTCTTATGAAGGAGGTTTTAGAAGAGCATATAAAAGAGCATTTAGGAGCAGAAGACATGACCCAACAACAACGTCAACAA
GAGATAGAAGACGTCTTATCCATACTAAAAACTTATATGAAATAG

Upstream 100 bases:

>100_bases
TTAGTCATCCATAATGCAGCGATCGAGTTTATCATACCACTATAAAAAGCATCCTATAAATATGCTACCCCCCCCAGTAT
AAAATGAGACAATAAAAATA

Downstream 100 bases:

>100_bases
AAAACTAAGAAGAATAATATTTCAAAAGGAACGATTTTTTCATGTTAGAAGTACTATTATTGGCGCTGGCACTCGCTGCG
GATGCGTTTGCGGCTTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSHTQKSKSKLLGRIRRIRRIKGQSVAIEASLEGDPECMALLQQIAALKGAVNGLMKEVLEEHIKEHLGAEDMTQQQRQQ
EIEDVLSILKTYMK

Sequences:

>Translated_94_residues
MSHTQKSKSKLLGRIRRIRRIKGQSVAIEASLEGDPECMALLQQIAALKGAVNGLMKEVLEEHIKEHLGAEDMTQQQRQQ
EIEDVLSILKTYMK
>Mature_93_residues
SHTQKSKSKLLGRIRRIRRIKGQSVAIEASLEGDPECMALLQQIAALKGAVNGLMKEVLEEHIKEHLGAEDMTQQQRQQE
IEDVLSILKTYMK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI87081725, Length=94, Percent_Identity=48.936170212766, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1788422, Length=94, Percent_Identity=43.6170212765958, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10656; Mature: 10524

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTQKSKSKLLGRIRRIRRIKGQSVAIEASLEGDPECMALLQQIAALKGAVNGLMKEVL
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEHIKEHLGAEDMTQQQRQQEIEDVLSILKTYMK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SHTQKSKSKLLGRIRRIRRIKGQSVAIEASLEGDPECMALLQQIAALKGAVNGLMKEVL
CCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEHIKEHLGAEDMTQQQRQQEIEDVLSILKTYMK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA