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The map label for this gene is 93006127

Identifier: 93006127

GI number: 93006127

Start: 1585586

End: 1586992

Strand: Reverse

Name: 93006127

Synonym: Pcryo_1299

Alternate gene names: NA

Gene position: 1586992-1585586 (Counterclockwise)

Preceding gene: 93006130

Following gene: 93006126

Centisome position: 51.86

GC content: 45.77

Gene sequence:

>1407_bases
ATGCTATCGCCCCAAGACCAATTGACTGAGCTGGTACGTACTCTTGAGACGCAGCAGCACGTCTTTGCTACTGACCCGCT
ACTCATTACTGAAAAGCTGCAAAATGAAGAAGGTTCGCCACTGCAAAAACTGCATCGACGAGCGTCACGAATAGACAGCA
ATGGCGCGCTGGCAGGCGTGCTTGGTAAGATTGATGGTCGCATCAAAGGCATCATGGTTGTCATGAGCGTGATTTGGTGT
CTCTCAGGATTTTTGGGATTATTTACCTTATTGCAGACCAATGTGGTGAACTTCTTTTACGTCTTGGTATGCTTATTGGG
TTTTCATAGTCTTATGCTTCTGGGCTGGCTAGTCATGACGCTTATCAATCAAGGCAAGCAGTCTTCAAATTGGTTTGCCA
GCTTTGTCAGTCCCAGTTATTTGATACGTGGTAAAGATGATGTAACTCAGGCAGCGGTGAATTTATATGAGCGGCAGCTG
CAACACAGCGGTATGCGTTGGTATTTAGGCAGATTTAGTCATCAGTTATGGCTTGCCACACTGACCGGTATGCTGCTTGC
GATTATTTTTCTGTTGATTGTGCGTCAATACAGCTTTAGCTGGGAGTCAACGCTGCTGTCAGATCAGGCGCTAATTACTT
TGACGCAAGTACTTGGATGGTTACCAAGTATGGTTGGATTCGATGTTCCGGACAGTACGGCTATCGTACAGAGCCGATTA
GTGACTGATGCTATGCCTTTGTCTGTCGCACGGCAATGGGCAGGCTTGTTGGTTGGTAGTTTACTGATGTACGGGATTGT
CCCACGCGCGATTGCTTGGGCATTTTGTGCCTTGATGTTCCGTCGTAAAAAGATGCGTTTGGATATTAAGCTGCCTTATT
ATCAAAAGATTTTGAATTTTTGGCAGCGTCATGTGGTGGATGCTGATGACTTTAAAGAAGCCCCCGCGCCTATCGCCCCA
AAAGCCCAAGTCAGTGCGGGCAAAAAACTGGTTGCGCTATTAGAGTATCCAGCGGAGCAAAACCAATGGTGGCAGTCGGG
TTTCGTTACAGGCATTACTGATACGACTGATATTGAGAATTTTGGTATTCTTGATGACCGTGAAGATATGGCACGGCTAA
AGGCTTACCTAGATGCAAATCCGGTACAGGTATTGCTTGGTATTCATTTTAAAGCGCTGCCTGACCGTGGTACATTGCGT
AAACTTGATCAGATCGCCAATCACGCCAAACATGGACTGATTGTACAACTGTTAGAGGACAATAGCCTGAGTCTGACAGA
GCACCATAATACGGGCAATGATGTGTTAAATGCTGGTTCAGACTCGAATTTAGAAAAACAACATGTTCGTTATCAGCAAT
GGCAAACCGCCCTATCTGCTCGAAAAATCGGTTTGGTTAATAACTGA

Upstream 100 bases:

>100_bases
AAATAAAGTAATAATTGCATTAACAAATACGCTTTTATAATTATAATTTTCCACACATTTTAATATCTCATTTCACCATT
GATTATACGGACATCAGACC

Downstream 100 bases:

>100_bases
AAATCTTTTTTTAGACGATGGATTATTGAACTCATACCGAAAGATAGATCAATTTGTTCTACAATAAAAGCTATGATGTT
TTTGGATACTACCAATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MLSPQDQLTELVRTLETQQHVFATDPLLITEKLQNEEGSPLQKLHRRASRIDSNGALAGVLGKIDGRIKGIMVVMSVIWC
LSGFLGLFTLLQTNVVNFFYVLVCLLGFHSLMLLGWLVMTLINQGKQSSNWFASFVSPSYLIRGKDDVTQAAVNLYERQL
QHSGMRWYLGRFSHQLWLATLTGMLLAIIFLLIVRQYSFSWESTLLSDQALITLTQVLGWLPSMVGFDVPDSTAIVQSRL
VTDAMPLSVARQWAGLLVGSLLMYGIVPRAIAWAFCALMFRRKKMRLDIKLPYYQKILNFWQRHVVDADDFKEAPAPIAP
KAQVSAGKKLVALLEYPAEQNQWWQSGFVTGITDTTDIENFGILDDREDMARLKAYLDANPVQVLLGIHFKALPDRGTLR
KLDQIANHAKHGLIVQLLEDNSLSLTEHHNTGNDVLNAGSDSNLEKQHVRYQQWQTALSARKIGLVNN

Sequences:

>Translated_468_residues
MLSPQDQLTELVRTLETQQHVFATDPLLITEKLQNEEGSPLQKLHRRASRIDSNGALAGVLGKIDGRIKGIMVVMSVIWC
LSGFLGLFTLLQTNVVNFFYVLVCLLGFHSLMLLGWLVMTLINQGKQSSNWFASFVSPSYLIRGKDDVTQAAVNLYERQL
QHSGMRWYLGRFSHQLWLATLTGMLLAIIFLLIVRQYSFSWESTLLSDQALITLTQVLGWLPSMVGFDVPDSTAIVQSRL
VTDAMPLSVARQWAGLLVGSLLMYGIVPRAIAWAFCALMFRRKKMRLDIKLPYYQKILNFWQRHVVDADDFKEAPAPIAP
KAQVSAGKKLVALLEYPAEQNQWWQSGFVTGITDTTDIENFGILDDREDMARLKAYLDANPVQVLLGIHFKALPDRGTLR
KLDQIANHAKHGLIVQLLEDNSLSLTEHHNTGNDVLNAGSDSNLEKQHVRYQQWQTALSARKIGLVNN
>Mature_468_residues
MLSPQDQLTELVRTLETQQHVFATDPLLITEKLQNEEGSPLQKLHRRASRIDSNGALAGVLGKIDGRIKGIMVVMSVIWC
LSGFLGLFTLLQTNVVNFFYVLVCLLGFHSLMLLGWLVMTLINQGKQSSNWFASFVSPSYLIRGKDDVTQAAVNLYERQL
QHSGMRWYLGRFSHQLWLATLTGMLLAIIFLLIVRQYSFSWESTLLSDQALITLTQVLGWLPSMVGFDVPDSTAIVQSRL
VTDAMPLSVARQWAGLLVGSLLMYGIVPRAIAWAFCALMFRRKKMRLDIKLPYYQKILNFWQRHVVDADDFKEAPAPIAP
KAQVSAGKKLVALLEYPAEQNQWWQSGFVTGITDTTDIENFGILDDREDMARLKAYLDANPVQVLLGIHFKALPDRGTLR
KLDQIANHAKHGLIVQLLEDNSLSLTEHHNTGNDVLNAGSDSNLEKQHVRYQQWQTALSARKIGLVNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021296 [H]

Pfam domain/function: PF11067 DUF2868 [H]

EC number: NA

Molecular weight: Translated: 52730; Mature: 52730

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]