| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006122
Identifier: 93006122
GI number: 93006122
Start: 1579702
End: 1580370
Strand: Reverse
Name: 93006122
Synonym: Pcryo_1294
Alternate gene names: NA
Gene position: 1580370-1579702 (Counterclockwise)
Preceding gene: 93006126
Following gene: 93006121
Centisome position: 51.65
GC content: 39.76
Gene sequence:
>669_bases ATGGCGCATTATTTTGGATTTGTACCTTCAGATAAATTAAAAGCATTAATCGTTGAAGCTGAGCAAATCATTGCATCGAA TGAGGAAGTACCATACTACCCATATCGCGATGCTTTAACGCATCAGACTGCGCGTGATCTTATTGATAATTTATTGGTTG GTCTGGTTGACATTATCCCAAATCCTGAACGCCAAGCGTCCATGCGTAAAGTGGTTGTCACTGTTGAACGTGCGACCGAT ACCTTGCTTAATATTTTGCTGGGTAAAGAAAATAACGAAGAAGTATTGCCAAGCTTCCATTTTCTAAGAGATCGAGCAAC CTTTATCGATAATGACGGTCTAAAACGGGTGGGTTTTAAGCTCACAGAACAACATACTGCCATCATTCAAAAAGGTTTTG CAGCCATTACTCCTGAACATGTGGATACCAAGACATTTAAAACCGCACTCGAAACCATGAACGAAGAAACTTTAACTCAC TTTATTAGCCGTTTTGCTGAAACCTTAAAATTGGGTATGATTAAACGCAAATCTGTACCTGTTGCCAAAGCAGCTATCGA TAAAGGCATGAATATGGCACTTAATAAGTTGTTACCTGATTTGCCAGACAGCTCATTGAATCGCTTGGCGAACTATTACC GCCCTTTTATCGTAGAAAAGCCAGAATAA
Upstream 100 bases:
>100_bases TATGGTGAATCTTTGGTTGGCAACCCATTTAAATACTAACCGATTTAACGAAGAATGTAACGCTAGTTAAACCTCGAAAA CAACAAATAAAGGAAGCACA
Downstream 100 bases:
>100_bases GTGCCAATATTTGATTAATTTTGCCTCAAAAGCCAGTTGGCATTGGGCATATTCACGAAAATTTGCTAAAATAAGCGGCA CTTTTTACCAAAGGCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAHYFGFVPSDKLKALIVEAEQIIASNEEVPYYPYRDALTHQTARDLIDNLLVGLVDIIPNPERQASMRKVVVTVERATD TLLNILLGKENNEEVLPSFHFLRDRATFIDNDGLKRVGFKLTEQHTAIIQKGFAAITPEHVDTKTFKTALETMNEETLTH FISRFAETLKLGMIKRKSVPVAKAAIDKGMNMALNKLLPDLPDSSLNRLANYYRPFIVEKPE
Sequences:
>Translated_222_residues MAHYFGFVPSDKLKALIVEAEQIIASNEEVPYYPYRDALTHQTARDLIDNLLVGLVDIIPNPERQASMRKVVVTVERATD TLLNILLGKENNEEVLPSFHFLRDRATFIDNDGLKRVGFKLTEQHTAIIQKGFAAITPEHVDTKTFKTALETMNEETLTH FISRFAETLKLGMIKRKSVPVAKAAIDKGMNMALNKLLPDLPDSSLNRLANYYRPFIVEKPE >Mature_221_residues AHYFGFVPSDKLKALIVEAEQIIASNEEVPYYPYRDALTHQTARDLIDNLLVGLVDIIPNPERQASMRKVVVTVERATDT LLNILLGKENNEEVLPSFHFLRDRATFIDNDGLKRVGFKLTEQHTAIIQKGFAAITPEHVDTKTFKTALETMNEETLTHF ISRFAETLKLGMIKRKSVPVAKAAIDKGMNMALNKLLPDLPDSSLNRLANYYRPFIVEKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25152; Mature: 25021
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHYFGFVPSDKLKALIVEAEQIIASNEEVPYYPYRDALTHQTARDLIDNLLVGLVDIIP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPERQASMRKVVVTVERATDTLLNILLGKENNEEVLPSFHFLRDRATFIDNDGLKRVGFK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCH LTEQHTAIIQKGFAAITPEHVDTKTFKTALETMNEETLTHFISRFAETLKLGMIKRKSVP HHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC VAKAAIDKGMNMALNKLLPDLPDSSLNRLANYYRPFIVEKPE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCC >Mature Secondary Structure AHYFGFVPSDKLKALIVEAEQIIASNEEVPYYPYRDALTHQTARDLIDNLLVGLVDIIP CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPERQASMRKVVVTVERATDTLLNILLGKENNEEVLPSFHFLRDRATFIDNDGLKRVGFK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCH LTEQHTAIIQKGFAAITPEHVDTKTFKTALETMNEETLTHFISRFAETLKLGMIKRKSVP HHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC VAKAAIDKGMNMALNKLLPDLPDSSLNRLANYYRPFIVEKPE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA