| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006106
Identifier: 93006106
GI number: 93006106
Start: 1550996
End: 1552804
Strand: Reverse
Name: 93006106
Synonym: Pcryo_1278
Alternate gene names: NA
Gene position: 1552804-1550996 (Counterclockwise)
Preceding gene: 93006107
Following gene: 93006105
Centisome position: 50.75
GC content: 44.5
Gene sequence:
>1809_bases ATGATGGATAAACAATATATTACTAAGCGCTTTATCAACACTTGTATCCGTGAAAATATCTATGGGTTGCTGTCAAATAA TTCGATTATCGAAACAGAATTTGATATTCCTGATCTGCCAGAGGTATTAAAACAACAAAAATTGTGGCTAAAGATAACCT CGTCCAATCAAACCAACTGGTTGCCGATTGTAGCCAGTGACTATATGCAATATTGGCAACTTGCCAGCCCAATGTGGCTT CAAAAAAACTCAGACGGTTACCTCATCAAGCATGACTATCAGGATTTTGTCGCCATTCTCAAACAGTTGCCAGATGCCTG TGAGACTGCGCTCGACAGCTATCTGCTTGAGCTTGATTGTGCCACCGAACACCGAGCGTTAGCGCGCCAAGGGTTTGAGT CTCAACGCTGCCATCTTAAGCGCAATATTAATGGATACCCAAGCTGGTCTGAGCGTTTGCTATACGCCGATCAAGTCGCC TCGTATTTGGATCACCCTTACTATCCGACTGCTCGAGCCAAGCTTGGTCTGGACGCGTCTGATATCGCAGCCTATAGTCC AGAGTTTGCGCCAACCTTTAGTCTATATTGGGTTGCTATCTCTAAAGCAATAAGCACCGTCAGCGCGAAGCTACCTGATG TTTGGCCAAGCTTTACAGACGTCGGTCTCAGTCCGGACCTCCAACAGACGCACCATCTGTTTCCCATACATCCGTTAACC TTGCCGCTGCTGCACCAGCATGTTCTCAAGGATACTTCGCTGCAAATTATATTGGCACCCAAATCTGCGCTAAGCGTACA ACCAACCTTATCTGTGCGCACAGTAGTGTGCTGTGCTGACCCAAATATTCATATCAAAGTACCGCTCATCGTCCGCACCT TGGGCAATAAAAACGTGCGCTTAATTAAGCCCTCAACCATTTATGATGGTCACTGGTTTCAGCGCACCTTACAGTTTATT GAAAAAAATGATGCCGCGCTGCAAGAGTGTTACGCCCATTGCGATGAAAGCCTAGGTGGTCATATGGGCGATGATAAAAC TTTTGCCTTTATAGTCAGGCACTATGACGATATCAATTTAACGGACAAAACCCCTGTCCCAGTGGCAGCATTTGGCAGCG TCATGCCTGATGGTCGCCCCTTTATCAGTCACTTAATTGCACAGTTTTATGACGGTGATAGTAAGCTTTGGTTAAAAGAA TACATCCATTTGTTATGCCATGTTCATTTAACTTTATGGATCAAATATGGCATTGCGCTAGAAGCCAATCAGCAAAATGC CGTCATTGTCTTTTATCACCATAGCCGCACGATGACCTTGCTCATGAAAGACAATGATTCTGCACGCCTTTATCCACCAC GATTTAACGCTAGCATGGCACAAGTTGGTTTAGGCGATGTGATAAAGAGCAGTGCTATTAATGACATCAAGGATATTAAA GACCAACGTATCGTCGTTGAAGATGAGTTGGCATTAGCGCAGATGTTTTTGACCATCACGCTCCAGCTAGACATCGTTGC CATTATTGAGATGATGAGCGCCTATAACATCATCAACCGTCATGACGCCTATCAAACCTTAATAGACTGTATTGATACGA CCTTACACAGCCTCTCTAAACAAGGTTACGACATCCATCTTGCCAAGCAAGTCTTATTAGAGAGCCAGCACTGGTATATC AAATACTTATTGTCTGCTGGTAGTCTGTTGTCAAAAGAGCAGTCTGGCGCGAGCGATATCAATAAGTTCTATGGCAAATC AGCACCCAACACCTTAAAACTTATGCAGCAACACAAGCAGGACTCCTAA
Upstream 100 bases:
>100_bases GTACTAAACGATGCCATAGCAAATTTGCAATGGCAGTTTGAATCCTAGGACGTTGTTACCTACTTTTTTACACATTTTAA TTGTTATATTTTGAGAGTTT
Downstream 100 bases:
>100_bases TGAGCTATCGAATTATGGTGGCAATCGTCTTATGTTGTCACTACCTGTCCGCGTTTTCTGCGTTAGGTATGCCTTTGTTT TTACCAATCATGCTCCAAGA
Product: IucA/IucC
Products: NA
Alternate protein names: IucA/IucC Family Protein; Siderophore Synthetase Component; IucA/IucC; IucA/IucC Family Siderophore Biosynthesis Protein; Achromobactin Biosynthetic Protein AcsA; Siderophore Synthase; Aerobactin Siderophore Biosynthesis; Siderophore Staphylobactin Biosynthesis Protein SbnC; Vibrioferrin Biosynthesis Protein PvsB; Vibrioferrin Amide Bond Forming Protein PvsB; Siderophore Biosynthesis Protein IucA/IucC Family; Iuca/Iucc Family Protein; Siderophore Biosynthesis Protein SbnC
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MMDKQYITKRFINTCIRENIYGLLSNNSIIETEFDIPDLPEVLKQQKLWLKITSSNQTNWLPIVASDYMQYWQLASPMWL QKNSDGYLIKHDYQDFVAILKQLPDACETALDSYLLELDCATEHRALARQGFESQRCHLKRNINGYPSWSERLLYADQVA SYLDHPYYPTARAKLGLDASDIAAYSPEFAPTFSLYWVAISKAISTVSAKLPDVWPSFTDVGLSPDLQQTHHLFPIHPLT LPLLHQHVLKDTSLQIILAPKSALSVQPTLSVRTVVCCADPNIHIKVPLIVRTLGNKNVRLIKPSTIYDGHWFQRTLQFI EKNDAALQECYAHCDESLGGHMGDDKTFAFIVRHYDDINLTDKTPVPVAAFGSVMPDGRPFISHLIAQFYDGDSKLWLKE YIHLLCHVHLTLWIKYGIALEANQQNAVIVFYHHSRTMTLLMKDNDSARLYPPRFNASMAQVGLGDVIKSSAINDIKDIK DQRIVVEDELALAQMFLTITLQLDIVAIIEMMSAYNIINRHDAYQTLIDCIDTTLHSLSKQGYDIHLAKQVLLESQHWYI KYLLSAGSLLSKEQSGASDINKFYGKSAPNTLKLMQQHKQDS
Sequences:
>Translated_602_residues MMDKQYITKRFINTCIRENIYGLLSNNSIIETEFDIPDLPEVLKQQKLWLKITSSNQTNWLPIVASDYMQYWQLASPMWL QKNSDGYLIKHDYQDFVAILKQLPDACETALDSYLLELDCATEHRALARQGFESQRCHLKRNINGYPSWSERLLYADQVA SYLDHPYYPTARAKLGLDASDIAAYSPEFAPTFSLYWVAISKAISTVSAKLPDVWPSFTDVGLSPDLQQTHHLFPIHPLT LPLLHQHVLKDTSLQIILAPKSALSVQPTLSVRTVVCCADPNIHIKVPLIVRTLGNKNVRLIKPSTIYDGHWFQRTLQFI EKNDAALQECYAHCDESLGGHMGDDKTFAFIVRHYDDINLTDKTPVPVAAFGSVMPDGRPFISHLIAQFYDGDSKLWLKE YIHLLCHVHLTLWIKYGIALEANQQNAVIVFYHHSRTMTLLMKDNDSARLYPPRFNASMAQVGLGDVIKSSAINDIKDIK DQRIVVEDELALAQMFLTITLQLDIVAIIEMMSAYNIINRHDAYQTLIDCIDTTLHSLSKQGYDIHLAKQVLLESQHWYI KYLLSAGSLLSKEQSGASDINKFYGKSAPNTLKLMQQHKQDS >Mature_602_residues MMDKQYITKRFINTCIRENIYGLLSNNSIIETEFDIPDLPEVLKQQKLWLKITSSNQTNWLPIVASDYMQYWQLASPMWL QKNSDGYLIKHDYQDFVAILKQLPDACETALDSYLLELDCATEHRALARQGFESQRCHLKRNINGYPSWSERLLYADQVA SYLDHPYYPTARAKLGLDASDIAAYSPEFAPTFSLYWVAISKAISTVSAKLPDVWPSFTDVGLSPDLQQTHHLFPIHPLT LPLLHQHVLKDTSLQIILAPKSALSVQPTLSVRTVVCCADPNIHIKVPLIVRTLGNKNVRLIKPSTIYDGHWFQRTLQFI EKNDAALQECYAHCDESLGGHMGDDKTFAFIVRHYDDINLTDKTPVPVAAFGSVMPDGRPFISHLIAQFYDGDSKLWLKE YIHLLCHVHLTLWIKYGIALEANQQNAVIVFYHHSRTMTLLMKDNDSARLYPPRFNASMAQVGLGDVIKSSAINDIKDIK DQRIVVEDELALAQMFLTITLQLDIVAIIEMMSAYNIINRHDAYQTLIDCIDTTLHSLSKQGYDIHLAKQVLLESQHWYI KYLLSAGSLLSKEQSGASDINKFYGKSAPNTLKLMQQHKQDS
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68542; Mature: 68542
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDKQYITKRFINTCIRENIYGLLSNNSIIETEFDIPDLPEVLKQQKLWLKITSSNQTNW CCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCE LPIVASDYMQYWQLASPMWLQKNSDGYLIKHDYQDFVAILKQLPDACETALDSYLLELDC EEEHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHEEECC ATEHRALARQGFESQRCHLKRNINGYPSWSERLLYADQVASYLDHPYYPTARAKLGLDAS CHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH DIAAYSPEFAPTFSLYWVAISKAISTVSAKLPDVWPSFTDVGLSPDLQQTHHLFPIHPLT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHH LPLLHQHVLKDTSLQIILAPKSALSVQPTLSVRTVVCCADPNIHIKVPLIVRTLGNKNVR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCEE LIKPSTIYDGHWFQRTLQFIEKNDAALQECYAHCDESLGGHMGDDKTFAFIVRHYDDINL EECCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC TDKTPVPVAAFGSVMPDGRPFISHLIAQFYDGDSKLWLKEYIHLLCHVHLTLWIKYGIAL CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE EANQQNAVIVFYHHSRTMTLLMKDNDSARLYPPRFNASMAQVGLGDVIKSSAINDIKDIK EECCCCEEEEEEECCCEEEEEEECCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHC DQRIVVEDELALAQMFLTITLQLDIVAIIEMMSAYNIINRHDAYQTLIDCIDTTLHSLSK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYDIHLAKQVLLESQHWYIKYLLSAGSLLSKEQSGASDINKFYGKSAPNTLKLMQQHKQ CCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCC DS CC >Mature Secondary Structure MMDKQYITKRFINTCIRENIYGLLSNNSIIETEFDIPDLPEVLKQQKLWLKITSSNQTNW CCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCE LPIVASDYMQYWQLASPMWLQKNSDGYLIKHDYQDFVAILKQLPDACETALDSYLLELDC EEEHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHEEECC ATEHRALARQGFESQRCHLKRNINGYPSWSERLLYADQVASYLDHPYYPTARAKLGLDAS CHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH DIAAYSPEFAPTFSLYWVAISKAISTVSAKLPDVWPSFTDVGLSPDLQQTHHLFPIHPLT HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHH LPLLHQHVLKDTSLQIILAPKSALSVQPTLSVRTVVCCADPNIHIKVPLIVRTLGNKNVR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCEE LIKPSTIYDGHWFQRTLQFIEKNDAALQECYAHCDESLGGHMGDDKTFAFIVRHYDDINL EECCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC TDKTPVPVAAFGSVMPDGRPFISHLIAQFYDGDSKLWLKEYIHLLCHVHLTLWIKYGIAL CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE EANQQNAVIVFYHHSRTMTLLMKDNDSARLYPPRFNASMAQVGLGDVIKSSAINDIKDIK EECCCCEEEEEEECCCEEEEEEECCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHC DQRIVVEDELALAQMFLTITLQLDIVAIIEMMSAYNIINRHDAYQTLIDCIDTTLHSLSK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYDIHLAKQVLLESQHWYIKYLLSAGSLLSKEQSGASDINKFYGKSAPNTLKLMQQHKQ CCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCC DS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA