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The map label for this gene is yngJ [H]

Identifier: 93006013

GI number: 93006013

Start: 1434384

End: 1435652

Strand: Direct

Name: yngJ [H]

Synonym: Pcryo_1185

Alternate gene names: 93006013

Gene position: 1434384-1435652 (Clockwise)

Preceding gene: 93006012

Following gene: 93006014

Centisome position: 46.88

GC content: 46.89

Gene sequence:

>1269_bases
ATGTCTAGCAATGCCTTGATGTTTACAGCGACAGAACATGGTCAAGCCATGCATGCCCAAGTACAAGCATTTATCGAAAC
CCATATTGAGCCCATTGAAGCGCAGTTTTGGGCAGATTGTCATCAGCAAAATCCTGATGGTAATTGGAAAAATTGGCAGT
GGCCAGAAAAGTATGAGAGCTTACGTAAGCAAGCACGTGAAGCTGACCTGTGGAATTTATTTTTGCCGGATGACATCCTA
GGTGCTGGCCTTTCGGTTACCGATTATGCACCGATTGCAGAGTTGACAGGCCGCAGTTTATTAGCGCCTTACGTGTTTAA
CTGCAATGCCCCTGATAGTGGCAATATGGAGCTGTTGTGGCGTTATGGTACACAAGAGCAGCAAGATAAATGGCTGACGC
CAATCTTGGAAGGTAAAACGCGTTCGGTATTTTGTATGACTGAGCCTGAGGTGGCATCCAGTGATGCGACCAACATGCAG
GCGACTGCGGTTGTCAATGGCGATGAGATTATTATCAATGGCAGTAAATGGTGGTCATCAGGTCTGGGTGACCCAGCAGT
TGATATTTTGATTGTGATGGCATACACCCCTGATGAAACTAAAGACCGTCATCATCAGCATTCGATGGTATTGGTTCCAG
CAAAAACTGCAGGCGTCAATATCGAGCGCATGCTAAAAGTATTTGGCGATTATGATGCGCCGCATGGTCATGGTGAAGTC
AGCTTTAATGATGTACGTGTACCCGTTAGCCACTTTATCGGTGGCCCAGGTATGGGCTTTGAGATTGCGCAAGGTCGCTT
AGGGCCAGGTCGCATTCATCATTGCATGCGTTGTATTGGCGCTGCTGAAAAGTCGCTAGAGCTGGCTGTAAAACGCGGTA
TGGAGCGTACGGCTTTTGGTAAGCCATTACTACAACTAGGTGGTAACTTTGAGCGTATTGCTGAGGCTCGTATTAAAATT
GATCAAGCGCGTTTATTGACATTATATGCAGCGCAAAAAATGGACGCGCAAGGCACCAAAGCGGCACTCACTGAAATTTC
TGCTATTAAAGTAGTTGCGCCAACCGTGCTACAAGAAGTAGTCGATATGGCGATTCAAATCCATGGTGGCATGGGCGTTT
GCCAAGATACGATGCTGCCGAGTTTCTTTGCTCAAGCACGAGCGCTGCGCTTAGCCGATGGTCCTGATGAAGTGCATAAA
ACCATGATTGCGAAACTTGAGCTAAAGCGTCAAGGTTTTAGTCGTTCGTCGAAACCTGCTAAATCTTAA

Upstream 100 bases:

>100_bases
TGTTATAAATGGTAAATACGATACAGAGTTTACGTACGTACACTATGAAGTTTTTTATAAAAATGTGATTGAGATAATTA
ATAAGGATAGGGAAATCATT

Downstream 100 bases:

>100_bases
GGTAACTTAGATTTGTATTTATAACTAATACAAAACAAGCTCAATGGCGACCATAACTATAAATCCACTATCAATCATTT
GATAGTGGATTCTTCACCCC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSSNALMFTATEHGQAMHAQVQAFIETHIEPIEAQFWADCHQQNPDGNWKNWQWPEKYESLRKQAREADLWNLFLPDDIL
GAGLSVTDYAPIAELTGRSLLAPYVFNCNAPDSGNMELLWRYGTQEQQDKWLTPILEGKTRSVFCMTEPEVASSDATNMQ
ATAVVNGDEIIINGSKWWSSGLGDPAVDILIVMAYTPDETKDRHHQHSMVLVPAKTAGVNIERMLKVFGDYDAPHGHGEV
SFNDVRVPVSHFIGGPGMGFEIAQGRLGPGRIHHCMRCIGAAEKSLELAVKRGMERTAFGKPLLQLGGNFERIAEARIKI
DQARLLTLYAAQKMDAQGTKAALTEISAIKVVAPTVLQEVVDMAIQIHGGMGVCQDTMLPSFFAQARALRLADGPDEVHK
TMIAKLELKRQGFSRSSKPAKS

Sequences:

>Translated_422_residues
MSSNALMFTATEHGQAMHAQVQAFIETHIEPIEAQFWADCHQQNPDGNWKNWQWPEKYESLRKQAREADLWNLFLPDDIL
GAGLSVTDYAPIAELTGRSLLAPYVFNCNAPDSGNMELLWRYGTQEQQDKWLTPILEGKTRSVFCMTEPEVASSDATNMQ
ATAVVNGDEIIINGSKWWSSGLGDPAVDILIVMAYTPDETKDRHHQHSMVLVPAKTAGVNIERMLKVFGDYDAPHGHGEV
SFNDVRVPVSHFIGGPGMGFEIAQGRLGPGRIHHCMRCIGAAEKSLELAVKRGMERTAFGKPLLQLGGNFERIAEARIKI
DQARLLTLYAAQKMDAQGTKAALTEISAIKVVAPTVLQEVVDMAIQIHGGMGVCQDTMLPSFFAQARALRLADGPDEVHK
TMIAKLELKRQGFSRSSKPAKS
>Mature_421_residues
SSNALMFTATEHGQAMHAQVQAFIETHIEPIEAQFWADCHQQNPDGNWKNWQWPEKYESLRKQAREADLWNLFLPDDILG
AGLSVTDYAPIAELTGRSLLAPYVFNCNAPDSGNMELLWRYGTQEQQDKWLTPILEGKTRSVFCMTEPEVASSDATNMQA
TAVVNGDEIIINGSKWWSSGLGDPAVDILIVMAYTPDETKDRHHQHSMVLVPAKTAGVNIERMLKVFGDYDAPHGHGEVS
FNDVRVPVSHFIGGPGMGFEIAQGRLGPGRIHHCMRCIGAAEKSLELAVKRGMERTAFGKPLLQLGGNFERIAEARIKID
QARLLTLYAAQKMDAQGTKAALTEISAIKVVAPTVLQEVVDMAIQIHGGMGVCQDTMLPSFFAQARALRLADGPDEVHKT
MIAKLELKRQGFSRSSKPAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=413, Percent_Identity=49.1525423728814, Blast_Score=388, Evalue=1e-108,
Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=49.5, Blast_Score=382, Evalue=1e-106,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=49.5, Blast_Score=381, Evalue=1e-106,
Organism=Homo sapiens, GI4557233, Length=341, Percent_Identity=29.6187683284457, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=28.0653950953678, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI187960098, Length=405, Percent_Identity=25.1851851851852, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI4557231, Length=405, Percent_Identity=25.1851851851852, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI76496475, Length=389, Percent_Identity=26.2210796915167, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4557235, Length=389, Percent_Identity=26.2210796915167, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI21361497, Length=395, Percent_Identity=25.8227848101266, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4501859, Length=301, Percent_Identity=28.2392026578073, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4501857, Length=309, Percent_Identity=27.5080906148867, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI226958414, Length=369, Percent_Identity=22.7642276422764, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI226958412, Length=356, Percent_Identity=23.0337078651685, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87081958, Length=399, Percent_Identity=25.5639097744361, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1786223, Length=376, Percent_Identity=23.936170212766, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=364, Percent_Identity=49.1758241758242, Blast_Score=355, Evalue=4e-98,
Organism=Caenorhabditis elegans, GI17534899, Length=346, Percent_Identity=29.4797687861272, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71985184, Length=362, Percent_Identity=27.6243093922652, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=297, Percent_Identity=28.2828282828283, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=352, Percent_Identity=24.1477272727273, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=294, Percent_Identity=29.5918367346939, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=295, Percent_Identity=27.1186440677966, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=284, Percent_Identity=26.056338028169, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=340, Percent_Identity=24.7058823529412, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=293, Percent_Identity=25.938566552901, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=405, Percent_Identity=23.7037037037037, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=373, Percent_Identity=24.6648793565684, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=224, Percent_Identity=29.4642857142857, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356377, Length=395, Percent_Identity=28.3544303797468, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=28.0346820809249, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24646207, Length=348, Percent_Identity=28.735632183908, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24660351, Length=406, Percent_Identity=26.6009852216749, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666513, Length=288, Percent_Identity=27.7777777777778, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI21355753, Length=332, Percent_Identity=24.0963855421687, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46565; Mature: 46434

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNALMFTATEHGQAMHAQVQAFIETHIEPIEAQFWADCHQQNPDGNWKNWQWPEKYES
CCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LRKQAREADLWNLFLPDDILGAGLSVTDYAPIAELTGRSLLAPYVFNCNAPDSGNMELLW
HHHHHHHCCCEEEECCHHHHCCCCCCCCCCCHHHHCCCCEECCEEEECCCCCCCCEEEEE
RYGTQEQQDKWLTPILEGKTRSVFCMTEPEVASSDATNMQATAVVNGDEIIINGSKWWSS
ECCCCHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCHHHCC
GLGDPAVDILIVMAYTPDETKDRHHQHSMVLVPAKTAGVNIERMLKVFGDYDAPHGHGEV
CCCCCCEEEEEEEEECCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCE
SFNDVRVPVSHFIGGPGMGFEIAQGRLGPGRIHHCMRCIGAAEKSLELAVKRGMERTAFG
EECEEECCHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
KPLLQLGGNFERIAEARIKIDQARLLTLYAAQKMDAQGTKAALTEISAIKVVAPTVLQEV
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDMAIQIHGGMGVCQDTMLPSFFAQARALRLADGPDEVHKTMIAKLELKRQGFSRSSKPA
HHHHEEECCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KS
CC
>Mature Secondary Structure 
SSNALMFTATEHGQAMHAQVQAFIETHIEPIEAQFWADCHQQNPDGNWKNWQWPEKYES
CCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LRKQAREADLWNLFLPDDILGAGLSVTDYAPIAELTGRSLLAPYVFNCNAPDSGNMELLW
HHHHHHHCCCEEEECCHHHHCCCCCCCCCCCHHHHCCCCEECCEEEECCCCCCCCEEEEE
RYGTQEQQDKWLTPILEGKTRSVFCMTEPEVASSDATNMQATAVVNGDEIIINGSKWWSS
ECCCCHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCHHHCC
GLGDPAVDILIVMAYTPDETKDRHHQHSMVLVPAKTAGVNIERMLKVFGDYDAPHGHGEV
CCCCCCEEEEEEEEECCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCE
SFNDVRVPVSHFIGGPGMGFEIAQGRLGPGRIHHCMRCIGAAEKSLELAVKRGMERTAFG
EECEEECCHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
KPLLQLGGNFERIAEARIKIDQARLLTLYAAQKMDAQGTKAALTEISAIKVVAPTVLQEV
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDMAIQIHGGMGVCQDTMLPSFFAQARALRLADGPDEVHKTMIAKLELKRQGFSRSSKPA
HHHHEEECCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]