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The map label for this gene is rfaB [C]

Identifier: 93006007

GI number: 93006007

Start: 1427067

End: 1428188

Strand: Direct

Name: rfaB [C]

Synonym: Pcryo_1179

Alternate gene names: 93006007

Gene position: 1427067-1428188 (Clockwise)

Preceding gene: 93006005

Following gene: 93006012

Centisome position: 46.64

GC content: 38.59

Gene sequence:

>1122_bases
ATGATAACTAGCAATAAACCAACTATTTTACTAATATTAAAAGCGTTAGAAGGGCGCGGTGCAGAACGTATGGTCACGAC
ATTGGCGCGTGCCTATATAGATATGGATTATGATGTCCATGTGCTTTCCCTAGAAGATACGACAGATATGTGCTTAGATT
CTCGCGTGCATTACCACATCGTTCCTTATAATCAGCCGCTTTTTAATATAGAAACTGAGCAAGCCACCGCTTATAAAGAG
GTTGCAGCGCGCATTGATGAATATGTACTAAAAAATATCGGAACACCTAAATTAATCTTGGCCAATATTTACAAGGTTAA
TTGGATTATGGCATATAGTAAGCTACCAAATATAGTAAACGTATTGCACACCGCAGTGTCCAAACAATTTCAAGAGAAGC
TAGCAATCATACCTGCTCAAACCATAAGTCATTTAAAAGTGGTTTACGGTGCTCATCCGTGCAGTTGTGTCAGTGAAGGC
GCATGCCAAGATTTATTGACATTAATAGGTAACTTAAATAGAACCACGACAATTTATAACCCATGCGATGTCAGTCAAAT
TCAGCAATTGGCCAGTGAACATTTTCATATTGAGGAGTTTGGCTTGACTGATAAAGGTTATATTATTCATGTCGCTTCGT
TTGACGCTATGAAGGGTCATCGTGATTTACTGCAGGCCTATGCCAAAACAGAGCGCAGACTACCATTGGTTTTGGTAGGT
AAAGGTCGACTTGAAGATAAAATAAAACAATTAGCGATTGAGTTAAAAATTGAGAATAAAGTATATTTTTTAGACTTTTA
TACCAATCCTTATCCGTTGATTGCGGGAGCCGCACTGCTCGTCATGACCTCTAAGTATGAGGGCTTTGGTTATGTTATCG
TCGAAGCGCAAGCCTTAAATGTACCTGTTATCAGTACGGATTGCCCCTTTGGTCCAAGAGAGCTGTTAACACAGAAAAAC
CTAGTTGCTATTGATGATATCGAAGGGTTGGCAACGCTAATAAGTCAGGCATTAGATGATGCGAATCAATTTATAACGCC
GTTAAATCAGCAGCTATTACCAAAACACATTGCACAGCAGTATTTAGATTTTTCGCTATCAATAGTAAATGATATTAACT
AA

Upstream 100 bases:

>100_bases
AGACTAGCATACAAAGGTAGAGCGCTGCAATATTAAACAATTATTTTACGGCTATTTATTATACCAAAATAGGCATCACA
AGTATGAAAGACGGGTTACT

Downstream 100 bases:

>100_bases
AGTCGGAAAGTGATTGAGAGATAGGAGAGTGATTGGTAACACGCACGCCATATTGTTGATAGGTTTTGGCTAATAAATTA
AATGACGGTACAATAGTATT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MITSNKPTILLILKALEGRGAERMVTTLARAYIDMDYDVHVLSLEDTTDMCLDSRVHYHIVPYNQPLFNIETEQATAYKE
VAARIDEYVLKNIGTPKLILANIYKVNWIMAYSKLPNIVNVLHTAVSKQFQEKLAIIPAQTISHLKVVYGAHPCSCVSEG
ACQDLLTLIGNLNRTTTIYNPCDVSQIQQLASEHFHIEEFGLTDKGYIIHVASFDAMKGHRDLLQAYAKTERRLPLVLVG
KGRLEDKIKQLAIELKIENKVYFLDFYTNPYPLIAGAALLVMTSKYEGFGYVIVEAQALNVPVISTDCPFGPRELLTQKN
LVAIDDIEGLATLISQALDDANQFITPLNQQLLPKHIAQQYLDFSLSIVNDIN

Sequences:

>Translated_373_residues
MITSNKPTILLILKALEGRGAERMVTTLARAYIDMDYDVHVLSLEDTTDMCLDSRVHYHIVPYNQPLFNIETEQATAYKE
VAARIDEYVLKNIGTPKLILANIYKVNWIMAYSKLPNIVNVLHTAVSKQFQEKLAIIPAQTISHLKVVYGAHPCSCVSEG
ACQDLLTLIGNLNRTTTIYNPCDVSQIQQLASEHFHIEEFGLTDKGYIIHVASFDAMKGHRDLLQAYAKTERRLPLVLVG
KGRLEDKIKQLAIELKIENKVYFLDFYTNPYPLIAGAALLVMTSKYEGFGYVIVEAQALNVPVISTDCPFGPRELLTQKN
LVAIDDIEGLATLISQALDDANQFITPLNQQLLPKHIAQQYLDFSLSIVNDIN
>Mature_373_residues
MITSNKPTILLILKALEGRGAERMVTTLARAYIDMDYDVHVLSLEDTTDMCLDSRVHYHIVPYNQPLFNIETEQATAYKE
VAARIDEYVLKNIGTPKLILANIYKVNWIMAYSKLPNIVNVLHTAVSKQFQEKLAIIPAQTISHLKVVYGAHPCSCVSEG
ACQDLLTLIGNLNRTTTIYNPCDVSQIQQLASEHFHIEEFGLTDKGYIIHVASFDAMKGHRDLLQAYAKTERRLPLVLVG
KGRLEDKIKQLAIELKIENKVYFLDFYTNPYPLIAGAALLVMTSKYEGFGYVIVEAQALNVPVISTDCPFGPRELLTQKN
LVAIDDIEGLATLISQALDDANQFITPLNQQLLPKHIAQQYLDFSLSIVNDIN

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41837; Mature: 41837

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSNKPTILLILKALEGRGAERMVTTLARAYIDMDYDVHVLSLEDTTDMCLDSRVHYHI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEE
VPYNQPLFNIETEQATAYKEVAARIDEYVLKNIGTPKLILANIYKVNWIMAYSKLPNIVN
ECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEHHHCCHHHH
VLHTAVSKQFQEKLAIIPAQTISHLKVVYGAHPCSCVSEGACQDLLTLIGNLNRTTTIYN
HHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC
PCDVSQIQQLASEHFHIEEFGLTDKGYIIHVASFDAMKGHRDLLQAYAKTERRLPLVLVG
CCCHHHHHHHHHHCCEEHHCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEC
KGRLEDKIKQLAIELKIENKVYFLDFYTNPYPLIAGAALLVMTSKYEGFGYVIVEAQALN
CCCHHHHHHHEEEEEEECCEEEEEEECCCCCHHHHHHHHEEEEECCCCEEEEEEEEEECC
VPVISTDCPFGPRELLTQKNLVAIDDIEGLATLISQALDDANQFITPLNQQLLPKHIAQQ
CEEEECCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLDFSLSIVNDIN
HHCCHHHHHCCCC
>Mature Secondary Structure
MITSNKPTILLILKALEGRGAERMVTTLARAYIDMDYDVHVLSLEDTTDMCLDSRVHYHI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCEEEE
VPYNQPLFNIETEQATAYKEVAARIDEYVLKNIGTPKLILANIYKVNWIMAYSKLPNIVN
ECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEHHHCCHHHH
VLHTAVSKQFQEKLAIIPAQTISHLKVVYGAHPCSCVSEGACQDLLTLIGNLNRTTTIYN
HHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC
PCDVSQIQQLASEHFHIEEFGLTDKGYIIHVASFDAMKGHRDLLQAYAKTERRLPLVLVG
CCCHHHHHHHHHHCCEEHHCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHCCCCEEEEC
KGRLEDKIKQLAIELKIENKVYFLDFYTNPYPLIAGAALLVMTSKYEGFGYVIVEAQALN
CCCHHHHHHHEEEEEEECCEEEEEEECCCCCHHHHHHHHEEEEECCCCEEEEEEEEEECC
VPVISTDCPFGPRELLTQKNLVAIDDIEGLATLISQALDDANQFITPLNQQLLPKHIAQQ
CEEEECCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLDFSLSIVNDIN
HHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]