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The map label for this gene is tusE [H]

Identifier: 93005999

GI number: 93005999

Start: 1418067

End: 1418438

Strand: Reverse

Name: tusE [H]

Synonym: Pcryo_1171

Alternate gene names: 93005999

Gene position: 1418438-1418067 (Counterclockwise)

Preceding gene: 93006000

Following gene: 93005997

Centisome position: 46.36

GC content: 45.43

Gene sequence:

>372_bases
ATGAGTATGTCTATTAACTCGTCTACATCCTCTCTGACCTCAATAAATATGGCATTAGACGATGTAGCATTAGATCAGGA
TGGGCATTTACGTGACCACACTATCTGGACGCCCGATATTGCACAGCAGCTAGCTAATACCTTGGATATCGTCTTAGATA
CTGAGCGCTTGGCAGTGTTACAGCAAGTACGAGCTTTTTTTGTAAAATTCAATCACGCACCTGCCACGCGCCCACTAATA
AAATGGCTACAGCAGACTTTACCTGATGATGACATCAGCAATCAAAAGCTACAGCAGCTATTTAACACAGGTCTGGTCGC
CCGCCATGTCAATCGCCTCGCTGGGCTACCCAAACCGCCGAATTGCTTATAA

Upstream 100 bases:

>100_bases
AGCTTAATCTAGCGGCAAAGCTCACTGGTATTTTAAGCGATGCAGAATGGGTAGCAATGACCCAAGACAGCCGCTTTGAT
AAAGTCGTGACGATTGCCTT

Downstream 100 bases:

>100_bases
ATGCTCATAAAAAAGACAGATAAATTCTTTATTTATCTGCCTTTTTTATGAGCATTTTTATAATAAAAGTACTACTTTGG
GTCGTAGACGATGAGTGTCT

Product: putative DsrC-like protein

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein E [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSMSINSSTSSLTSINMALDDVALDQDGHLRDHTIWTPDIAQQLANTLDIVLDTERLAVLQQVRAFFVKFNHAPATRPLI
KWLQQTLPDDDISNQKLQQLFNTGLVARHVNRLAGLPKPPNCL

Sequences:

>Translated_123_residues
MSMSINSSTSSLTSINMALDDVALDQDGHLRDHTIWTPDIAQQLANTLDIVLDTERLAVLQQVRAFFVKFNHAPATRPLI
KWLQQTLPDDDISNQKLQQLFNTGLVARHVNRLAGLPKPPNCL
>Mature_122_residues
SMSINSSTSSLTSINMALDDVALDQDGHLRDHTIWTPDIAQQLANTLDIVLDTERLAVLQQVRAFFVKFNHAPATRPLIK
WLQQTLPDDDISNQKLQQLFNTGLVARHVNRLAGLPKPPNCL

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from tusD [H]

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=104, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: NA

Molecular weight: Translated: 13755; Mature: 13624

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSINSSTSSLTSINMALDDVALDQDGHLRDHTIWTPDIAQQLANTLDIVLDTERLAVL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHH
QQVRAFFVKFNHAPATRPLIKWLQQTLPDDDISNQKLQQLFNTGLVARHVNRLAGLPKPP
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NCL
CCC
>Mature Secondary Structure 
SMSINSSTSSLTSINMALDDVALDQDGHLRDHTIWTPDIAQQLANTLDIVLDTERLAVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHH
QQVRAFFVKFNHAPATRPLIKWLQQTLPDDDISNQKLQQLFNTGLVARHVNRLAGLPKPP
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NCL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA