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The map label for this gene is yfaE [H]

Identifier: 93005944

GI number: 93005944

Start: 1346234

End: 1346500

Strand: Reverse

Name: yfaE [H]

Synonym: Pcryo_1116

Alternate gene names: 93005944

Gene position: 1346500-1346234 (Counterclockwise)

Preceding gene: 93005945

Following gene: 93005942

Centisome position: 44.01

GC content: 41.57

Gene sequence:

>267_bases
ATGACTTGGGTAATGACGAGTAAGAAGCAATTTTACTTGCATGATGACGAAAGCTTGCTTGATGGATTGCTACGCACCGG
ACATGATATCAATTATCAATGTAAGGAAGGTTATTGTGGCAGCTGCCGCATCAAGCGTATCGCCAGCTCACACGTTATTG
ATTATCCTTTTGAGCCCTTAGCCATGATTGAAAAAGATGAAATCCTACCTTGCTGCTGTAGAGTACAAGGCGTGATTTAT
GTCAATCATGAGCTGATAGAAAAGTAG

Upstream 100 bases:

>100_bases
AGGCACAGCAAGCAAGTAAAATTTATCCCAGTAGCACGTTATAATAATTGTACTTATTTTATTTAGGATTGACCATATTA
TAAAAAGATAGGATAAAACT

Downstream 100 bases:

>100_bases
CTGCTAAATCAATAAATTATTAACTATTCGATCAATCAAAACTTATTAAAAAAGCGCGCTATCTTATAGATAGTGCGCTT
TTTGTTATTGCTCTTAGAGA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTWVMTSKKQFYLHDDESLLDGLLRTGHDINYQCKEGYCGSCRIKRIASSHVIDYPFEPLAMIEKDEILPCCCRVQGVIY
VNHELIEK

Sequences:

>Translated_88_residues
MTWVMTSKKQFYLHDDESLLDGLLRTGHDINYQCKEGYCGSCRIKRIASSHVIDYPFEPLAMIEKDEILPCCCRVQGVIY
VNHELIEK
>Mature_87_residues
TWVMTSKKQFYLHDDESLLDGLLRTGHDINYQCKEGYCGSCRIKRIASSHVIDYPFEPLAMIEKDEILPCCCRVQGVIYV
NHELIEK

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=82, Percent_Identity=41.4634146341463, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10240; Mature: 10109

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWVMTSKKQFYLHDDESLLDGLLRTGHDINYQCKEGYCGSCRIKRIASSHVIDYPFEPL
CCEEECCCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCEECCCCCCC
AMIEKDEILPCCCRVQGVIYVNHELIEK
EECCCCCCCCEEECCCCEEEECHHHHCC
>Mature Secondary Structure 
TWVMTSKKQFYLHDDESLLDGLLRTGHDINYQCKEGYCGSCRIKRIASSHVIDYPFEPL
CEEECCCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCEECCCCCCC
AMIEKDEILPCCCRVQGVIYVNHELIEK
EECCCCCCCCEEECCCCEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]