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The map label for this gene is 93005889

Identifier: 93005889

GI number: 93005889

Start: 1276714

End: 1277190

Strand: Direct

Name: 93005889

Synonym: Pcryo_1061

Alternate gene names: NA

Gene position: 1276714-1277190 (Clockwise)

Preceding gene: 93005888

Following gene: 93005890

Centisome position: 41.72

GC content: 42.35

Gene sequence:

>477_bases
TTGGTCAGATTAGTATCGAATATCACGACTATTGAAGAGAGTGACATGCGCTTTAGAAAACCAACCGTTGAGCCGCTTGA
AATTAATCTGACCCCGATGATTGATTGTTTATTATTTTTAATCGTGTTTTTGCTACTAGCAACCTCGTTCAATCACTTTA
GCCGCTTAAATATTATTTTGCCTGAAGCGGAAGGTGTGGCACTGACCGACGATAAAAACAGTATTGAGGTAGCCGTGCAA
GAAGATGGCAGCTATTTGGTCAATGGTATTACCCTTGCCAGCAGCAATGAAGCTGAACTCACCAGTATGTTGCAGCAAGA
GGCGGGCAGTAATCGTGATATGCTATTTGTGATTGCCGCTGATGCCAATGCCACACATCAATCAGTGGTAAGAGTGATGG
ATATCGCTGGCAAATTGGGCTTTTTAAATATAAACATCAGTACCGTTGTACCACTTGGTCAAGCGTTACCGCAATAA

Upstream 100 bases:

>100_bases
ATCAGCACTCAATTGACAGATTTGGTTTAGATGAAACGGCAACGGCTACTCTATAGTTGTGTTTTTAGCAGCTCCATCGT
GGCATTGTGAAAACGCTATA

Downstream 100 bases:

>100_bases
ATCTGAATAAGCTTGGCTTATAGCGTGTTCTCAGTATTAAGCACCATCACTCTTTTTTATGGCTATATACATCATTGCAA
GTTACTGCTTTATTAGTGCC

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Biopolymer ExbD/lR Family Transporter; Biopolymer Transport ExbD-Related Transmembrane Protein; Transport Energizing Protein ExbD/lR Family; GTP Cyclohydrolase I; Biopolymer Transport Protein ExbD; Biopolymer Transport; ExbD/lR Family Protein; Biopolymer Transport Protein Exbd/lr; Biopolymer Transporter ExbD/lR Family Protein

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVRLVSNITTIEESDMRFRKPTVEPLEINLTPMIDCLLFLIVFLLLATSFNHFSRLNIILPEAEGVALTDDKNSIEVAVQ
EDGSYLVNGITLASSNEAELTSMLQQEAGSNRDMLFVIAADANATHQSVVRVMDIAGKLGFLNINISTVVPLGQALPQ

Sequences:

>Translated_158_residues
MVRLVSNITTIEESDMRFRKPTVEPLEINLTPMIDCLLFLIVFLLLATSFNHFSRLNIILPEAEGVALTDDKNSIEVAVQ
EDGSYLVNGITLASSNEAELTSMLQQEAGSNRDMLFVIAADANATHQSVVRVMDIAGKLGFLNINISTVVPLGQALPQ
>Mature_158_residues
MVRLVSNITTIEESDMRFRKPTVEPLEINLTPMIDCLLFLIVFLLLATSFNHFSRLNIILPEAEGVALTDDKNSIEVAVQ
EDGSYLVNGITLASSNEAELTSMLQQEAGSNRDMLFVIAADANATHQSVVRVMDIAGKLGFLNINISTVVPLGQALPQ

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17260; Mature: 17260

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLVSNITTIEESDMRFRKPTVEPLEINLTPMIDCLLFLIVFLLLATSFNHFSRLNIIL
CEEEECCCEECCCCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
PEAEGVALTDDKNSIEVAVQEDGSYLVNGITLASSNEAELTSMLQQEAGSNRDMLFVIAA
ECCCCEEEECCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE
DANATHQSVVRVMDIAGKLGFLNINISTVVPLGQALPQ
CCCCCHHHHHHHHHHHCCEEEEEEEHHEEECCHHCCCC
>Mature Secondary Structure
MVRLVSNITTIEESDMRFRKPTVEPLEINLTPMIDCLLFLIVFLLLATSFNHFSRLNIIL
CEEEECCCEECCCCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
PEAEGVALTDDKNSIEVAVQEDGSYLVNGITLASSNEAELTSMLQQEAGSNRDMLFVIAA
ECCCCEEEECCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEE
DANATHQSVVRVMDIAGKLGFLNINISTVVPLGQALPQ
CCCCCHHHHHHHHHHHCCEEEEEEEHHEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA