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The map label for this gene is parB [H]

Identifier: 93005887

GI number: 93005887

Start: 1274735

End: 1275850

Strand: Direct

Name: parB [H]

Synonym: Pcryo_1059

Alternate gene names: 93005887

Gene position: 1274735-1275850 (Clockwise)

Preceding gene: 93005886

Following gene: 93005888

Centisome position: 41.66

GC content: 46.68

Gene sequence:

>1116_bases
ATGGCGAAGAAAAGAGGGTTGGCTGCCAATCGAGGTTTAGACGCCTTATTAGGGTCAATCAAAAAAGAAAAGCAAATCAC
CGCCTCTGCCTTGCAAGACGATATAGCCGTGCGTGAGCAGGCTTTACCAGCTGATCCAATAGAGACAAAAGCGACGGTCA
AAACTGCCGCTAATGCAAAATCTACTGCCGCTTCTGAGTCAAAAGATGCCAATCAACGTAAAGCTCGTACACCGCGTACA
GTAAGTAAAAATACTGCCAATGGCAATCGTGTAAACGTGAGTGAAAGTAACGGTTCTGAAGACCAAATCAGTTTGGTGCA
AATCGATGTTACCCGTTTGCAGGCTGGTAAGTATCAACCGCGTCGTGACATGAGTGAAACGGCACTGGCAGAATTGGCAT
CTTCTATCGAACAGCATGGTGTCATGCAGCCTATTGTTATTCGTCCATTACTCGCCACAGAAGATAAAAGCGAAGCTTTT
GTTACGCACGAGATCATCGCCGGTGAACGCCGCTGGCGTGCGGCGAAAATGGCAGGCAAGTCAGTCATTCCAGCGATTGA
GCGTGCTTTGTCAGATGAGCTGGCGATTGCCCTCGCATTAATTGAAAATATCCAGCGTGAAGATCTATCCGTGATTGAGC
AAGCAGCAGCATTACAGCGTTTTCATACTGAATTTGGTATGAGTCACGCTATGATTGCTGAAGTCGTGGGTAAAGCACGT
ACTACCGTATCAAACCTTCTGCGCTTAAACCAGTTGCACGACACGGTCAAAGATCACCTAGCTACTAGCGCCTTAGATAT
GGGTCATGCGCGTACGCTTTTAGCGTTATCATCTGAGCAGCAGCCTATCATTGCTCAAAAAATCATCGATGGTGGTATGA
CCGTACGCGAAGCTGAAAAGCTTGTTAAATCTATTTTGCAGCCAGCGCCAAAAGCCAGTCGCATCGAACAAGTACAGTCT
CGTGATGTTGAGCGTTTGACGCAGCGACTAACAGATATGCTCGGCGCTGAAGTGAAGCTTAAGCATAAAAAAGACGGGCA
GGGTAGTGTTGAGATATTCTTCCACAGTCAAGATCAATTAGCCGCTTTAATTAAGCATATGGAAGCACAGGCTTAA

Upstream 100 bases:

>100_bases
TCACTGGAGTAATCAGCCAGATAACAAAATTGTGCACATCGTATTTATTATTGAATTTAAAACATTTGGCTTTTATTTTA
GCGTTAGAGGATAGGTAATC

Downstream 100 bases:

>100_bases
AATATTGCGTGTGTATTTAATCTAATGCTTATTTAAATAGTCTTGATGACCGCTATTTTTATCAAAATATAGAAGAGAGT
TGATATGTGGGAGTTGGTAA

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MAKKRGLAANRGLDALLGSIKKEKQITASALQDDIAVREQALPADPIETKATVKTAANAKSTAASESKDANQRKARTPRT
VSKNTANGNRVNVSESNGSEDQISLVQIDVTRLQAGKYQPRRDMSETALAELASSIEQHGVMQPIVIRPLLATEDKSEAF
VTHEIIAGERRWRAAKMAGKSVIPAIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKAR
TTVSNLLRLNQLHDTVKDHLATSALDMGHARTLLALSSEQQPIIAQKIIDGGMTVREAEKLVKSILQPAPKASRIEQVQS
RDVERLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQLAALIKHMEAQA

Sequences:

>Translated_371_residues
MAKKRGLAANRGLDALLGSIKKEKQITASALQDDIAVREQALPADPIETKATVKTAANAKSTAASESKDANQRKARTPRT
VSKNTANGNRVNVSESNGSEDQISLVQIDVTRLQAGKYQPRRDMSETALAELASSIEQHGVMQPIVIRPLLATEDKSEAF
VTHEIIAGERRWRAAKMAGKSVIPAIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKAR
TTVSNLLRLNQLHDTVKDHLATSALDMGHARTLLALSSEQQPIIAQKIIDGGMTVREAEKLVKSILQPAPKASRIEQVQS
RDVERLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQLAALIKHMEAQA
>Mature_370_residues
AKKRGLAANRGLDALLGSIKKEKQITASALQDDIAVREQALPADPIETKATVKTAANAKSTAASESKDANQRKARTPRTV
SKNTANGNRVNVSESNGSEDQISLVQIDVTRLQAGKYQPRRDMSETALAELASSIEQHGVMQPIVIRPLLATEDKSEAFV
THEIIAGERRWRAAKMAGKSVIPAIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKART
TVSNLLRLNQLHDTVKDHLATSALDMGHARTLLALSSEQQPIIAQKIIDGGMTVREAEKLVKSILQPAPKASRIEQVQSR
DVERLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQLAALIKHMEAQA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 40480; Mature: 40349

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRGLAANRGLDALLGSIKKEKQITASALQDDIAVREQALPADPIETKATVKTAANAK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCH
STAASESKDANQRKARTPRTVSKNTANGNRVNVSESNGSEDQISLVQIDVTRLQAGKYQP
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEHHHHHCCCCCC
RRDMSETALAELASSIEQHGVMQPIVIRPLLATEDKSEAFVTHEIIAGERRWRAAKMAGK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVIPAIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TTVSNLLRLNQLHDTVKDHLATSALDMGHARTLLALSSEQQPIIAQKIIDGGMTVREAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCHHHHHHHHCCCCHHHHHH
LVKSILQPAPKASRIEQVQSRDVERLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECHHHH
AALIKHMEAQA
HHHHHHHHCCC
>Mature Secondary Structure 
AKKRGLAANRGLDALLGSIKKEKQITASALQDDIAVREQALPADPIETKATVKTAANAK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCH
STAASESKDANQRKARTPRTVSKNTANGNRVNVSESNGSEDQISLVQIDVTRLQAGKYQP
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEHHHHHCCCCCC
RRDMSETALAELASSIEQHGVMQPIVIRPLLATEDKSEAFVTHEIIAGERRWRAAKMAGK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SVIPAIERALSDELAIALALIENIQREDLSVIEQAAALQRFHTEFGMSHAMIAEVVGKAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TTVSNLLRLNQLHDTVKDHLATSALDMGHARTLLALSSEQQPIIAQKIIDGGMTVREAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCHHHHHHHHCCCCHHHHHH
LVKSILQPAPKASRIEQVQSRDVERLTQRLTDMLGAEVKLKHKKDGQGSVEIFFHSQDQL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECHHHH
AALIKHMEAQA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]