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The map label for this gene is cobT [H]

Identifier: 93005854

GI number: 93005854

Start: 1226597

End: 1227685

Strand: Direct

Name: cobT [H]

Synonym: Pcryo_1026

Alternate gene names: 93005854

Gene position: 1226597-1227685 (Clockwise)

Preceding gene: 93005851

Following gene: 93005855

Centisome position: 40.09

GC content: 46.65

Gene sequence:

>1089_bases
TTGACATGTACCAGATTTAGGATACTTCCTTTGAACATATTTAATGCCCCGATAATTCCCAATATCGAAAATAATGCGCT
ACGCCAGCAGCTAGAGCAAATCATTGACCAAAAGACCAAACCAATTGGCGCACTTGGACGTTTAGAGACGCTCGCTCTGC
AGTTAGGTATGATTCAAGGGACGCTTACGCCAAAGATTGAGCAACCTCAAATTCGAGTATTTGCCGCCGATCATGGTTTA
ACCAAGCATGGCACGTCTGCGTATCCTAGTGCAGTCACTGCACAGATGGTTTATAACTTTTTGCAAGGCGGCGCTGCCAT
CAATGTCTTAGCACGTCAGCATAATATTGAGCTAAAAGTAGTCGATGCTGGGGTAGACGCGGATTTTAGCAATTCTCCTT
TTAAAGACCATCCGCAACTGCTAGATTATAAAATTCGACATGGTAGCCGTGATGCGCTAACAGAAGCTGCGATGACAGAA
GTAGAATGCTTGGCCGCATTAGAGAGTGGTATGAACGTGGTTAAGAACATGGCGGGTAATCTATTGATTGTCGGTGAAAT
GGGCATCGGTAATACCTCAGCGGCAAGTCTTTTGCTAGCGAGACTTGGCGACTTGTCTATTGCTGATTGTATCGGTCGCG
GTACAGGACTCGATGATGCAGGCTTGCAGCATAAGGCAAATATCTTAACGCAAGTATTAGAGCGTCACCGTGAAGCGCAA
GTGCCGTTCGATGTGCTTGCTGCATTAGGCGGGCTTGAGATTGCTATGATGGCAGGCGCGCTGATGCAGGCTGCCAGTGA
ACGTCGTATTTTGTTAATTGATGGCTTTATCGCCAGTAGTGCTTTGCTTGTCGCCGAGCGCTTAGCACCGGGTGTTGCTC
AATATGCTATCTTTGCTCATCACTCAGTTGAACCAGGACACGCGCATTTATTAAAACTGCTGAATGCTAAGCCATTACTT
GATATGGGTATGCGCTTAGGCGAGGGCAGTGGTGCGGCATTAGCGTATCCACTATTACAATCTGCCTGTGCCATTATCAA
TGAGATGGCAAGTTTTAGTGATGCTGGTATCAGTGAGCAAAGCAAGTGA

Upstream 100 bases:

>100_bases
ATATTCTATAGTAAATCTACGTTGCTAGGAAATCTATTCGGCTCATATTTGATTTTATTCATGGTAAAGCTTAGATACTC
TGCTAGTATGTGGGTTTTGT

Downstream 100 bases:

>100_bases
TGCAAAGTTCATCCTCAAAGCTGTCTGTATTGCAGCGCCTTCGTTATGAAGCCCGATTGATATTGGTTGCTGTTCAGTTT
TTAACCCGTATATCCGTCCC

Product: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase

Products: NA

Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MTCTRFRILPLNIFNAPIIPNIENNALRQQLEQIIDQKTKPIGALGRLETLALQLGMIQGTLTPKIEQPQIRVFAADHGL
TKHGTSAYPSAVTAQMVYNFLQGGAAINVLARQHNIELKVVDAGVDADFSNSPFKDHPQLLDYKIRHGSRDALTEAAMTE
VECLAALESGMNVVKNMAGNLLIVGEMGIGNTSAASLLLARLGDLSIADCIGRGTGLDDAGLQHKANILTQVLERHREAQ
VPFDVLAALGGLEIAMMAGALMQAASERRILLIDGFIASSALLVAERLAPGVAQYAIFAHHSVEPGHAHLLKLLNAKPLL
DMGMRLGEGSGAALAYPLLQSACAIINEMASFSDAGISEQSK

Sequences:

>Translated_362_residues
MTCTRFRILPLNIFNAPIIPNIENNALRQQLEQIIDQKTKPIGALGRLETLALQLGMIQGTLTPKIEQPQIRVFAADHGL
TKHGTSAYPSAVTAQMVYNFLQGGAAINVLARQHNIELKVVDAGVDADFSNSPFKDHPQLLDYKIRHGSRDALTEAAMTE
VECLAALESGMNVVKNMAGNLLIVGEMGIGNTSAASLLLARLGDLSIADCIGRGTGLDDAGLQHKANILTQVLERHREAQ
VPFDVLAALGGLEIAMMAGALMQAASERRILLIDGFIASSALLVAERLAPGVAQYAIFAHHSVEPGHAHLLKLLNAKPLL
DMGMRLGEGSGAALAYPLLQSACAIINEMASFSDAGISEQSK
>Mature_361_residues
TCTRFRILPLNIFNAPIIPNIENNALRQQLEQIIDQKTKPIGALGRLETLALQLGMIQGTLTPKIEQPQIRVFAADHGLT
KHGTSAYPSAVTAQMVYNFLQGGAAINVLARQHNIELKVVDAGVDADFSNSPFKDHPQLLDYKIRHGSRDALTEAAMTEV
ECLAALESGMNVVKNMAGNLLIVGEMGIGNTSAASLLLARLGDLSIADCIGRGTGLDDAGLQHKANILTQVLERHREAQV
PFDVLAALGGLEIAMMAGALMQAASERRILLIDGFIASSALLVAERLAPGVAQYAIFAHHSVEPGHAHLLKLLNAKPLLD
MGMRLGEGSGAALAYPLLQSACAIINEMASFSDAGISEQSK

Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobT family [H]

Homologues:

Organism=Escherichia coli, GI1788300, Length=344, Percent_Identity=32.8488372093023, Blast_Score=169, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003200
- InterPro:   IPR023195
- InterPro:   IPR017846 [H]

Pfam domain/function: PF02277 DBI_PRT [H]

EC number: =2.4.2.21 [H]

Molecular weight: Translated: 38562; Mature: 38431

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCTRFRILPLNIFNAPIIPNIENNALRQQLEQIIDQKTKPIGALGRLETLALQLGMIQG
CCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
TLTPKIEQPQIRVFAADHGLTKHGTSAYPSAVTAQMVYNFLQGGAAINVLARQHNIELKV
CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCEEEE
VDAGVDADFSNSPFKDHPQLLDYKIRHGSRDALTEAAMTEVECLAALESGMNVVKNMAGN
EECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LLIVGEMGIGNTSAASLLLARLGDLSIADCIGRGTGLDDAGLQHKANILTQVLERHREAQ
EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VPFDVLAALGGLEIAMMAGALMQAASERRILLIDGFIASSALLVAERLAPGVAQYAIFAH
CCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHH
HSVEPGHAHLLKLLNAKPLLDMGMRLGEGSGAALAYPLLQSACAIINEMASFSDAGISEQ
CCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SK
CC
>Mature Secondary Structure 
TCTRFRILPLNIFNAPIIPNIENNALRQQLEQIIDQKTKPIGALGRLETLALQLGMIQG
CCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
TLTPKIEQPQIRVFAADHGLTKHGTSAYPSAVTAQMVYNFLQGGAAINVLARQHNIELKV
CCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCEEEE
VDAGVDADFSNSPFKDHPQLLDYKIRHGSRDALTEAAMTEVECLAALESGMNVVKNMAGN
EECCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LLIVGEMGIGNTSAASLLLARLGDLSIADCIGRGTGLDDAGLQHKANILTQVLERHREAQ
EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VPFDVLAALGGLEIAMMAGALMQAASERRILLIDGFIASSALLVAERLAPGVAQYAIFAH
CCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHH
HSVEPGHAHLLKLLNAKPLLDMGMRLGEGSGAALAYPLLQSACAIINEMASFSDAGISEQ
CCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA