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The map label for this gene is yqhD [H]

Identifier: 93005841

GI number: 93005841

Start: 1212006

End: 1213226

Strand: Reverse

Name: yqhD [H]

Synonym: Pcryo_1013

Alternate gene names: 93005841

Gene position: 1213226-1212006 (Counterclockwise)

Preceding gene: 93005842

Following gene: 93005840

Centisome position: 39.65

GC content: 44.8

Gene sequence:

>1221_bases
ATGAATAACTTTCAATATTACAATCCCGTCCGTATCGTCTTTGGTGAAGGTCAAATCGAGAAGTTGGCTGAGCTTGTACC
GGCAGAAGCTCGTGTCCTGATTACCTATGGTGGCAGTTCAGCACAACGTACAGGTACGTTAGATGAAGTTAAAACGGCAT
TAGCTGCCAGTGGCAATCGCGAAATATTCGAGTTTGGTGGTATTGAAGCCAATCCAGAATTTACTACCTTGCTAAAAGCT
GCTGATATGGTCAATGAGCACAATATTGACTTCTTATTAGCCGTTGGTGGTGGCTCTGTGCTTGACGGCAGTAAGTTTGT
CGCACTGGTATCATCATTGACTGAAAAAGATGGTACGGTATCACGCGATAAAGCATGGGATGCGCTCACCAGTTATTGCA
GGGAGATCGATTCAGCAGTTGATTTGGGCGCGGTATTAACCATTCCAGCGACTGGCTCTGAGATGAATTCAGGCGGCGTG
ATTAACTATAGTGAACGCCAAGCAAAACTGCCGTTTGGTAATGCACTTGCCTTCCCTAAATTTTCAATTTTAGATCCAAC
CAAAACTATGACTTTACCTGAACGCCAAGTAATGAATGGTGTGGCTGATGCCTTTGTTCATGTGATGGAACAGTACCTGA
CCTATCCGGTCAATGCGAAAGTTCAAGATGCCTTTGCTGAGAGCTTATTAAAGATTCTGATTGAGGAAGGCGCAGCGGTA
AAAGCCGATCCAGAGAATTTAGAGACCCGCAAAAACATCATGTGGACGGCAACTATGGCGCTAAATGGTCTGATCGGTAC
TGGTGTACCGCAAGATTGGACGACGCATATGATTGGTCATGAGTTGACCTCATTGCACGCGATTGACCATGCTCGCACGC
TGACCATCGTATTGCCATCAGTCATGCGTGAGCTTAAAGACAGTAAAAAAGACAAATTGCTTCAATATGCACGCAACGTT
TGGAACATCGAAGCTGACGATAATGGTACTGAATTAAATGATGATGCCATCATTGAAACCGCTATTAAACAGACTGAAAA
CTTCTTCCGCGAGCTTGGACTGCCGGTCAGCTTAGCAGATGTCGAGTTAGATGCTGCTGCCATTGATCCTATTATCAAGC
AATTAGAAGTGCATGGTATGGTGAAATTGGGTGAGCATGGTAAAAACGACTTGGCAGTATCACGTCGTATTCTAGAGCGT
GCCATTACTAGCAACGCTTAA

Upstream 100 bases:

>100_bases
TCTAATTAATATATAATGCGGACAGATGCAAATAAGTTGCAGACTTTATTTTCGGTTTTTAAATCTCTTTTTCATACTCA
GAAAACATATTAGGAATCTT

Downstream 100 bases:

>100_bases
CTCTCTGAGTAATTATCTATAGTTATATTGTCGTTATAGAAACCACTAGCCTGTCACTTCAGAGTGGCGGGTAACTTTAA
AATCAAAAATAAATAAAATA

Product: iron-containing alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNNFQYYNPVRIVFGEGQIEKLAELVPAEARVLITYGGSSAQRTGTLDEVKTALAASGNREIFEFGGIEANPEFTTLLKA
ADMVNEHNIDFLLAVGGGSVLDGSKFVALVSSLTEKDGTVSRDKAWDALTSYCREIDSAVDLGAVLTIPATGSEMNSGGV
INYSERQAKLPFGNALAFPKFSILDPTKTMTLPERQVMNGVADAFVHVMEQYLTYPVNAKVQDAFAESLLKILIEEGAAV
KADPENLETRKNIMWTATMALNGLIGTGVPQDWTTHMIGHELTSLHAIDHARTLTIVLPSVMRELKDSKKDKLLQYARNV
WNIEADDNGTELNDDAIIETAIKQTENFFRELGLPVSLADVELDAAAIDPIIKQLEVHGMVKLGEHGKNDLAVSRRILER
AITSNA

Sequences:

>Translated_406_residues
MNNFQYYNPVRIVFGEGQIEKLAELVPAEARVLITYGGSSAQRTGTLDEVKTALAASGNREIFEFGGIEANPEFTTLLKA
ADMVNEHNIDFLLAVGGGSVLDGSKFVALVSSLTEKDGTVSRDKAWDALTSYCREIDSAVDLGAVLTIPATGSEMNSGGV
INYSERQAKLPFGNALAFPKFSILDPTKTMTLPERQVMNGVADAFVHVMEQYLTYPVNAKVQDAFAESLLKILIEEGAAV
KADPENLETRKNIMWTATMALNGLIGTGVPQDWTTHMIGHELTSLHAIDHARTLTIVLPSVMRELKDSKKDKLLQYARNV
WNIEADDNGTELNDDAIIETAIKQTENFFRELGLPVSLADVELDAAAIDPIIKQLEVHGMVKLGEHGKNDLAVSRRILER
AITSNA
>Mature_406_residues
MNNFQYYNPVRIVFGEGQIEKLAELVPAEARVLITYGGSSAQRTGTLDEVKTALAASGNREIFEFGGIEANPEFTTLLKA
ADMVNEHNIDFLLAVGGGSVLDGSKFVALVSSLTEKDGTVSRDKAWDALTSYCREIDSAVDLGAVLTIPATGSEMNSGGV
INYSERQAKLPFGNALAFPKFSILDPTKTMTLPERQVMNGVADAFVHVMEQYLTYPVNAKVQDAFAESLLKILIEEGAAV
KADPENLETRKNIMWTATMALNGLIGTGVPQDWTTHMIGHELTSLHAIDHARTLTIVLPSVMRELKDSKKDKLLQYARNV
WNIEADDNGTELNDDAIIETAIKQTENFFRELGLPVSLADVELDAAAIDPIIKQLEVHGMVKLGEHGKNDLAVSRRILER
AITSNA

Specific function: NADP-dependent ADH activity [H]

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=401, Percent_Identity=52.6184538653367, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1787493, Length=331, Percent_Identity=25.6797583081571, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082107, Length=292, Percent_Identity=24.6575342465753, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1789163, Length=353, Percent_Identity=23.5127478753541, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI48994951, Length=332, Percent_Identity=22.5903614457831, Blast_Score=62, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321181, Length=303, Percent_Identity=22.1122112211221, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24657991, Length=353, Percent_Identity=24.0793201133144, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 44291; Mature: 44291

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFQYYNPVRIVFGEGQIEKLAELVPAEARVLITYGGSSAQRTGTLDEVKTALAASGNR
CCCCCEECCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCC
EIFEFGGIEANPEFTTLLKAADMVNEHNIDFLLAVGGGSVLDGSKFVALVSSLTEKDGTV
CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCC
SRDKAWDALTSYCREIDSAVDLGAVLTIPATGSEMNSGGVINYSERQAKLPFGNALAFPK
CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
FSILDPTKTMTLPERQVMNGVADAFVHVMEQYLTYPVNAKVQDAFAESLLKILIEEGAAV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
KADPENLETRKNIMWTATMALNGLIGTGVPQDWTTHMIGHELTSLHAIDHARTLTIVLPS
CCCCHHHHHHHHEEEEEHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRELKDSKKDKLLQYARNVWNIEADDNGTELNDDAIIETAIKQTENFFRELGLPVSLAD
HHHHHHHCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
VELDAAAIDPIIKQLEVHGMVKLGEHGKNDLAVSRRILERAITSNA
CCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNFQYYNPVRIVFGEGQIEKLAELVPAEARVLITYGGSSAQRTGTLDEVKTALAASGNR
CCCCCEECCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCC
EIFEFGGIEANPEFTTLLKAADMVNEHNIDFLLAVGGGSVLDGSKFVALVSSLTEKDGTV
CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCC
SRDKAWDALTSYCREIDSAVDLGAVLTIPATGSEMNSGGVINYSERQAKLPFGNALAFPK
CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
FSILDPTKTMTLPERQVMNGVADAFVHVMEQYLTYPVNAKVQDAFAESLLKILIEEGAAV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
KADPENLETRKNIMWTATMALNGLIGTGVPQDWTTHMIGHELTSLHAIDHARTLTIVLPS
CCCCHHHHHHHHEEEEEHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRELKDSKKDKLLQYARNVWNIEADDNGTELNDDAIIETAIKQTENFFRELGLPVSLAD
HHHHHHHCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
VELDAAAIDPIIKQLEVHGMVKLGEHGKNDLAVSRRILERAITSNA
CCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]